Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RGMA

Gene Name Gene ID Reads Annotation
RGMA ENSG00000182175 3405 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]



Genes with expression patterns similar to RGMA

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. RGMA ENSG00000182175 3405 2 1.000 1.000 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
2. CELSR2 ENSG00000143126 3566 1.731 0.865 0.866 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
3. CKB ENSG00000166165 54181 1.722 0.890 0.832 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
4. DPYSL5 ENSG00000157851 6855 1.707 0.850 0.857 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
5. LRIG1 ENSG00000144749, ENSG00000282243 1639 1.705 0.834 0.871 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
6. SOX3 ENSG00000134595 5297 1.699 0.814 0.885 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
7. FAM181A ENSG00000140067, ENSG00000273533 1757 1.679 0.788 0.891 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
8. POU3F2 ENSG00000184486 2683 1.669 0.852 0.817 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
9. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.661 0.891 0.770 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
10. NRARP ENSG00000198435 1658 1.661 0.793 0.868 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
11. HES5 ENSG00000197921, ENSG00000273529 9293 1.655 0.810 0.845 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
12. DTX4 ENSG00000110042 2639 1.651 0.866 0.785 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
13. SRGAP3 ENSG00000196220 5297 1.642 0.783 0.859 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
14. RHBDL3 ENSG00000141314 2571 1.64 0.827 0.813 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
15. LINC01158 1332 1.622 0.782 0.840 long intergenic non-protein coding RNA 1158, transcript variant 4
16. TSPAN18 ENSG00000157570 9391 1.618 0.808 0.810 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
17. SLITRK2 ENSG00000185985 905 1.613 0.819 0.794 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
18. PDPN ENSG00000162493 5095 1.609 0.773 0.836 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
19. SYT11 ENSG00000132718 3832 1.598 0.838 0.760 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
20. SOX2 ENSG00000181449 19791 1.592 0.816 0.776 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
21. MYCL ENSG00000116990 1128 1.589 0.753 0.836 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
22. NES ENSG00000132688 20034 1.582 0.774 0.808 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
23. SEMA5B ENSG00000082684 2716 1.577 0.747 0.830 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
24. GREB1 ENSG00000196208 4256 1.557 0.801 0.756 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
25. CXCR4 ENSG00000121966 4708 1.547 0.806 0.741 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
26. PTPRZ1 ENSG00000106278 1326 1.547 0.731 0.816 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
27. LOC100240734 1898 1.546 0.720 0.826 uncharacterized LOC100240734
28. MIR124-2HG ENSG00000254377 940 1.545 0.832 0.713 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
29. ASRGL1 ENSG00000162174 4293 1.543 0.715 0.828 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
30. AGO1 ENSG00000092847 2525 1.537 0.726 0.811 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
31. MSI1 ENSG00000135097 6935 1.534 0.776 0.758 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
32. LINC00461 ENSG00000245526 4465 1.53 0.810 0.720 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
33. CDH4 ENSG00000179242, ENSG00000280641 1069 1.53 0.748 0.782 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
34. PLP1 ENSG00000123560 2266 1.516 0.727 0.789 proteolipid protein 1 [Source:HGNC Symbol;Acc:HGNC:9086]
35. MAP1B ENSG00000131711 44568 1.515 0.789 0.726 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
36. JAM2 ENSG00000154721 1771 1.506 0.795 0.711 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
37. DPYSL2 ENSG00000092964 47074 1.504 0.752 0.752 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
38. COTL1 ENSG00000103187 30280 1.497 0.738 0.759 coactosin like F-actin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:18304]
39. RNF165 ENSG00000141622 1865 1.496 0.784 0.712 ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
40. CENPV ENSG00000166582 18001 1.494 0.763 0.731 centromere protein V [Source:HGNC Symbol;Acc:HGNC:29920]
41. MIAT ENSG00000225783 2977 1.49 0.786 0.704 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
42. TUBB2B ENSG00000137285 35642 1.488 0.773 0.715 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
43. NOTCH1 ENSG00000148400 5516 1.433 0.717 0.716 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
44. RND2 ENSG00000108830 3761 1.431 0.704 0.727 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
45. ENPP2 ENSG00000136960 3320 0.869 0.869 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
46. FZD3 ENSG00000104290 11650 0.854 0.854 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
47. PAX6 ENSG00000007372 3710 0.85 - 0.850 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
48. ZIC1 ENSG00000152977 18260 0.846 0.846 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
49. NRIP3 ENSG00000175352 238 0.837 - 0.837 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
50. NEUROG1 ENSG00000181965 1244 0.827 - 0.827 neurogenin 1 [Source:HGNC Symbol;Acc:HGNC:7764]
51. KLHDC8A ENSG00000162873 2265 0.825 - 0.825 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
52. ZIC2 ENSG00000043355 4457 0.823 0.823 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
53. FAM181B ENSG00000182103 461 0.823 - 0.823 family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
54. RGS20 ENSG00000147509 282 0.823 - 0.823 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
55. TSPAN13 ENSG00000106537 4122 0.81 0.810 - tetraspanin 13 [Source:HGNC Symbol;Acc:HGNC:21643]
56. SLC1A2 ENSG00000110436 1231 0.809 - 0.809 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
57. TKTL1 ENSG00000007350 1212 0.808 - 0.808 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
58. RHOB ENSG00000143878 1893 0.805 0.805 - ras homolog family member B [Source:HGNC Symbol;Acc:HGNC:668]
59. FGFBP3 ENSG00000174721 4234 0.803 - 0.803 fibroblast growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:23428]
60. FGF19 ENSG00000162344 241 0.8 - 0.800 fibroblast growth factor 19 [Source:HGNC Symbol;Acc:HGNC:3675]
61. HOXD3 ENSG00000128652 1324 0.799 - 0.799 homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
62. ZIC4 ENSG00000174963 2667 0.798 0.798 - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
63. DLL1 ENSG00000198719, ENSG00000275555 1642 0.797 0.797 - delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
64. CSPG5 ENSG00000114646 558 0.796 - 0.796 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
65. C16orf45 ENSG00000166780, ENSG00000278823 4846 0.795 0.795 - chromosome 16 open reading frame 45 [Source:HGNC Symbol;Acc:HGNC:19213]
66. HEYL ENSG00000163909 2647 0.794 - 0.794 hes related family bHLH transcription factor with YRPW motif-like [Source:HGNC Symbol;Acc:HGNC:4882]
67. HOXB-AS3 ENSG00000233101 1776 0.793 - 0.793 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
68. GDF10 ENSG00000266524 711 0.789 0.789 - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
69. HOXB2 ENSG00000173917 6040 0.788 0.788 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
70. CTNND2 ENSG00000169862 1640 0.784 0.784 - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
71. IRX5 ENSG00000176842 2175 0.784 - 0.784 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
72. IRX3 ENSG00000177508 7140 0.782 - 0.782 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]
73. KLF13 ENSG00000169926, ENSG00000275746 3783 0.778 - 0.778 Kruppel like factor 13 [Source:NCBI gene;Acc:51621]
74. UCP2 ENSG00000175567 1141 0.776 - 0.776 uncoupling protein 2 [Source:HGNC Symbol;Acc:HGNC:12518]
75. ADD2 ENSG00000075340 810 0.769 - 0.769 adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
76. EIF3L ENSG00000100129 47251 0.769 0.769 - eukaryotic translation initiation factor 3 subunit L [Source:HGNC Symbol;Acc:HGNC:18138]
77. IGFBPL1 ENSG00000137142 3283 0.768 0.768 - insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
78. SCUBE2 ENSG00000175356 1730 0.767 - 0.767 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
79. NHLH1 ENSG00000171786 4811 0.766 - 0.766 nescient helix-loop-helix 1 [Source:HGNC Symbol;Acc:HGNC:7817]
80. APCDD1 ENSG00000154856 2448 0.765 0.765 - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
81. CCND1 ENSG00000110092 8014 0.765 - 0.765 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
82. KCNC1 ENSG00000129159 233 0.762 - 0.762 potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
83. CCDC85C ENSG00000205476 3808 0.76 - 0.760 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
84. RFX4 ENSG00000111783 1382 0.757 0.757 - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
85. HOXC9 ENSG00000180806 3191 0.757 - 0.757 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]
86. ZIC5 ENSG00000139800 441 0.757 0.757 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
87. BHLHE22 ENSG00000180828 179 0.756 - 0.756 basic helix-loop-helix family member e22 [Source:HGNC Symbol;Acc:HGNC:11963]
88. HOXC6 ENSG00000197757 13409 0.755 0.755 - homeobox C6 [Source:HGNC Symbol;Acc:HGNC:5128]
89. CBS ENSG00000160200 15678 0.753 - 0.753 cystathionine-beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
90. GBX2 ENSG00000168505 227 0.752 - 0.752 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
91. DPYSL3 ENSG00000113657 7319 0.752 - 0.752 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
92. NEUROD4 ENSG00000123307 377 0.751 - 0.751 neuronal differentiation 4 [Source:HGNC Symbol;Acc:HGNC:13802]
93. IGDCC3 ENSG00000174498 26431 0.75 - 0.750 immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
94. NCAN ENSG00000130287 1136 0.749 - 0.749 neurocan [Source:HGNC Symbol;Acc:HGNC:2465]
95. RASSF2 ENSG00000101265 1157 0.749 - 0.749 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
96. SLC2A1 ENSG00000117394 2892 0.749 - 0.749 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
97. TMEM158 ENSG00000249992 678 0.748 0.748 - transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
98. CNIH2 ENSG00000174871 3037 0.748 0.748 - cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]
99. FLJ12825 ENSG00000248265 822 0.748 - 0.748 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
100. FAM107A ENSG00000168309 211 0.747 - 0.747 family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]

There are 81 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA