Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCUBE2

Gene Name Gene ID Reads Annotation
SCUBE2 ENSG00000175356 1730 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]



Genes with expression patterns similar to SCUBE2

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SCUBE2 ENSG00000175356 1730 2 1.000 1.000 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
2. TKTL1 ENSG00000007350 1212 1.939 0.964 0.975 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
3. SOX1 ENSG00000182968 1339 1.884 0.952 0.932 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
4. SYT2 ENSG00000143858 2364 1.876 0.954 0.922 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
5. HOXB-AS3 ENSG00000233101 1776 1.846 0.936 0.910 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
6. PRDM13 ENSG00000112238 312 1.836 0.952 0.884 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
7. SOX2 ENSG00000181449 19791 1.807 0.893 0.914 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
8. ARL4A ENSG00000122644 3071 1.802 0.915 0.887 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
9. SLC1A2 ENSG00000110436 1231 1.772 0.892 0.880 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
10. WSCD1 ENSG00000179314 1121 1.768 0.849 0.919 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
11. PAX3 ENSG00000135903 1126 1.761 0.886 0.875 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
12. HES5 ENSG00000197921, ENSG00000273529 9293 1.759 0.886 0.873 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
13. POU3F2 ENSG00000184486 2683 1.754 0.858 0.896 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
14. LINC00461 ENSG00000245526 4465 1.753 0.875 0.878 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
15. TOX3 ENSG00000103460 1758 1.745 0.888 0.857 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
16. SLC2A1 ENSG00000117394 2892 1.739 0.876 0.863 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
17. FZD10 ENSG00000111432 608 1.737 0.931 0.806 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
18. LOC100240734 1898 1.723 0.830 0.893 uncharacterized LOC100240734
19. CRNDE ENSG00000245694 3754 1.718 0.860 0.858 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
20. RHBDL3 ENSG00000141314 2571 1.714 0.809 0.905 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
21. RGS20 ENSG00000147509 282 1.704 0.826 0.878 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
22. RND2 ENSG00000108830 3761 1.695 0.855 0.840 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
23. NRARP ENSG00000198435 1658 1.694 0.826 0.868 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
24. DLL1 ENSG00000198719, ENSG00000275555 1642 1.689 0.863 0.826 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
25. PDPN ENSG00000162493 5095 1.676 0.792 0.884 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
26. NRIP3 ENSG00000175352 238 1.667 0.825 0.842 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
27. FGFR3 ENSG00000068078 2862 1.661 0.840 0.821 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
28. CSPG5 ENSG00000114646 558 1.654 0.798 0.856 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
29. DTX4 ENSG00000110042 2639 1.649 0.761 0.888 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
30. SOX3 ENSG00000134595 5297 1.644 0.800 0.844 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
31. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.643 0.757 0.886 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
32. ZIC4 ENSG00000174963 2667 1.64 0.907 0.733 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
33. CKB ENSG00000166165 54181 1.64 0.772 0.868 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
34. LFNG ENSG00000106003 1260 1.635 0.810 0.825 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
35. MSI1 ENSG00000135097 6935 1.633 0.824 0.809 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
36. GBX2 ENSG00000168505 227 1.628 0.703 0.925 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
37. CRABP1 ENSG00000166426 2178 1.625 0.863 0.762 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
38. FAM181A ENSG00000140067, ENSG00000273533 1757 1.623 0.796 0.827 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
39. SEMA5B ENSG00000082684 2716 1.621 0.776 0.845 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
40. CCND1 ENSG00000110092 8014 1.615 0.773 0.842 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
41. PAX6 ENSG00000007372 3710 1.604 0.815 0.789 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
42. FLJ12825 ENSG00000248265 822 1.6 0.754 0.846 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
43. NEDD9 ENSG00000111859 1509 1.596 0.819 0.777 neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
44. ROBO3 ENSG00000154134 1085 1.592 0.775 0.817 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
45. RASSF2 ENSG00000101265 1157 1.587 0.753 0.834 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
46. HS6ST1 ENSG00000136720 4974 1.586 0.755 0.831 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
47. TSPAN18 ENSG00000157570 9391 1.578 0.720 0.858 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
48. PAX7 ENSG00000009709 810 1.577 0.716 0.861 paired box 7 [Source:HGNC Symbol;Acc:HGNC:8621]
49. ASRGL1 ENSG00000162174 4293 1.568 0.737 0.831 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
50. CCDC85C ENSG00000205476 3808 1.567 0.705 0.862 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
51. MYCL ENSG00000116990 1128 1.563 0.713 0.850 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
52. FAM167A ENSG00000154319 299 1.554 0.846 0.708 family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]
53. LINC00925 LINC00925 517 1.552 0.801 0.751
54. ALPL ENSG00000162551 725 1.526 0.728 0.798 alkaline phosphatase, liver/bone/kidney [Source:HGNC Symbol;Acc:HGNC:438]
55. IGFBPL1 ENSG00000137142 3283 1.517 0.751 0.766 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
56. SRGAP3 ENSG00000196220 5297 1.516 0.728 0.788 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
57. HES6 ENSG00000144485 4284 1.499 0.780 0.719 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
58. GLDC ENSG00000178445 513 1.496 0.734 0.762 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
59. RFX4 ENSG00000111783 1382 1.495 0.788 0.707 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
60. SLITRK2 ENSG00000185985 905 1.489 0.759 0.730 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
61. PLEKHG1 ENSG00000120278 1008 1.484 0.732 0.752 pleckstrin homology and RhoGEF domain containing G1 [Source:HGNC Symbol;Acc:HGNC:20884]
62. ZBTB16 ENSG00000109906 287 1.477 0.717 0.760 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
63. CCDC140 ENSG00000163081 233 1.427 0.723 0.704 coiled-coil domain containing 140 [Source:HGNC Symbol;Acc:HGNC:26514]
64. ZIC3 ENSG00000156925 420 0.917 0.917 - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
65. AXIN2 ENSG00000168646 2778 0.917 0.917 - axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
66. PTPRZ1 ENSG00000106278 1326 0.912 - 0.912 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
67. OLIG3 ENSG00000177468 918 0.899 0.899 - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
68. MSX1 ENSG00000163132 2038 0.886 0.886 - msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
69. ZIC5 ENSG00000139800 441 0.88 0.880 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
70. OTP ENSG00000171540 179 0.871 0.871 - orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
71. WNT3A ENSG00000154342 267 0.863 0.863 - Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
72. IRX5 ENSG00000176842 2175 0.858 - 0.858 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
73. CELSR2 ENSG00000143126 3566 0.857 - 0.857 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
74. ZIC2 ENSG00000043355 4457 0.856 0.856 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
75. NUAK2 ENSG00000163545 538 0.854 - 0.854 NUAK family kinase 2 [Source:HGNC Symbol;Acc:HGNC:29558]
76. PTN ENSG00000105894 11178 0.853 0.853 - pleiotrophin [Source:HGNC Symbol;Acc:HGNC:9630]
77. ZIC1 ENSG00000152977 18260 0.852 0.852 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
78. WASF3 ENSG00000132970 6777 0.848 0.848 - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
79. LINC01159 ENSG00000229743 210 0.843 - 0.843 long intergenic non-protein coding RNA 1159 [Source:HGNC Symbol;Acc:HGNC:49514]
80. FAM107A ENSG00000168309 211 0.842 - 0.842 family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]
81. APCDD1 ENSG00000154856 2448 0.84 0.840 - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
82. GPRC5B ENSG00000167191 684 0.837 - 0.837 G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
83. SP5 ENSG00000204335 211 0.831 0.831 - Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
84. GDF10 ENSG00000266524 711 0.829 0.829 - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
85. CDH4 ENSG00000179242, ENSG00000280641 1069 0.828 - 0.828 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
86. IRX3 ENSG00000177508 7140 0.826 - 0.826 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]
87. NOTCH1 ENSG00000148400 5516 0.825 - 0.825 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
88. NCKAP5 ENSG00000176771 481 0.824 - 0.824 NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]
89. NKD1 ENSG00000140807 2100 0.812 0.812 - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
90. ARL4C ENSG00000188042 5437 0.81 - 0.810 ADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]
91. MIR124-2HG ENSG00000254377 940 0.808 - 0.808 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
92. TMEM257 484 0.795 0.795 - transmembrane protein 257
93. POU4F2 ENSG00000151615 74 0.792 - 0.792 POU class 4 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9219]
94. HOXB2 ENSG00000173917 6040 0.787 0.787 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
95. PCDH8 ENSG00000136099 203 0.787 - 0.787 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
96. LRIG1 ENSG00000144749, ENSG00000282243 1639 0.784 - 0.784 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
97. HOXB9 ENSG00000170689 2051 0.783 - 0.783 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
98. TOX ENSG00000198846 1208 0.783 0.783 - thymocyte selection associated high mobility group box [Source:HGNC Symbol;Acc:HGNC:18988]
99. WNT1 ENSG00000125084 1392 0.782 0.782 - Wnt family member 1 [Source:HGNC Symbol;Acc:HGNC:12774]
100. HOXC5 ENSG00000172789, ENSG00000273046 4001 0.78 0.780 - homeobox C5 [Source:NCBI gene;Acc:3222]

There are 71 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA