Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDPN

Gene Name Gene ID Reads Annotation
PDPN ENSG00000162493 5095 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]



Genes with expression patterns similar to PDPN

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. PDPN ENSG00000162493 5095 2 1.000 1.000 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
2. HES5 ENSG00000197921, ENSG00000273529 9293 1.834 0.916 0.918 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
3. RHBDL3 ENSG00000141314 2571 1.817 0.894 0.923 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
4. FAM181A ENSG00000140067, ENSG00000273533 1757 1.793 0.882 0.911 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
5. POU3F2 ENSG00000184486 2683 1.789 0.892 0.897 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
6. CKB ENSG00000166165 54181 1.784 0.890 0.894 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
7. SOX3 ENSG00000134595 5297 1.77 0.876 0.894 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
8. NRARP ENSG00000198435 1658 1.761 0.873 0.888 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
9. SOX2 ENSG00000181449 19791 1.754 0.874 0.880 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
10. HOXB-AS3 ENSG00000233101 1776 1.737 0.825 0.912 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
11. LINC01158 1332 1.735 0.831 0.904 long intergenic non-protein coding RNA 1158, transcript variant 4
12. PAX6 ENSG00000007372 3710 1.732 0.847 0.885 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
13. DTX4 ENSG00000110042 2639 1.73 0.837 0.893 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
14. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.71 0.854 0.856 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
15. LOC100240734 1898 1.709 0.814 0.895 uncharacterized LOC100240734
16. CELSR2 ENSG00000143126 3566 1.703 0.794 0.909 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
17. LINC00461 ENSG00000245526 4465 1.7 0.858 0.842 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
18. SLC1A2 ENSG00000110436 1231 1.692 0.819 0.873 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
19. TSPAN18 ENSG00000157570 9391 1.691 0.805 0.886 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
20. SEMA5B ENSG00000082684 2716 1.687 0.808 0.879 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
21. CRNDE ENSG00000245694 3754 1.685 0.825 0.860 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
22. CDH4 ENSG00000179242, ENSG00000280641 1069 1.684 0.819 0.865 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
23. DPYSL5 ENSG00000157851 6855 1.68 0.837 0.843 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
24. SCUBE2 ENSG00000175356 1730 1.676 0.792 0.884 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
25. DLL1 ENSG00000198719, ENSG00000275555 1642 1.67 0.915 0.755 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
26. MYCL ENSG00000116990 1128 1.661 0.781 0.880 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
27. RND2 ENSG00000108830 3761 1.653 0.814 0.839 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
28. TKTL1 ENSG00000007350 1212 1.651 0.799 0.852 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
29. KLHDC8A ENSG00000162873 2265 1.65 0.796 0.854 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
30. AGO1 ENSG00000092847 2525 1.645 0.801 0.844 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
31. SRGAP3 ENSG00000196220 5297 1.644 0.768 0.876 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
32. RGS20 ENSG00000147509 282 1.631 0.738 0.893 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
33. SLC2A1 ENSG00000117394 2892 1.631 0.806 0.825 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
34. CSPG5 ENSG00000114646 558 1.624 0.757 0.867 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
35. IGFBPL1 ENSG00000137142 3283 1.622 0.842 0.780 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
36. MSI1 ENSG00000135097 6935 1.617 0.830 0.787 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
37. RGMA ENSG00000182175 3405 1.609 0.773 0.836 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
38. MIR124-2HG ENSG00000254377 940 1.606 0.764 0.842 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
39. CRABP1 ENSG00000166426 2178 1.599 0.838 0.761 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
40. SYT11 ENSG00000132718 3832 1.599 0.786 0.813 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
41. ASRGL1 ENSG00000162174 4293 1.594 0.730 0.864 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
42. FGFR3 ENSG00000068078 2862 1.592 0.765 0.827 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
43. SLITRK2 ENSG00000185985 905 1.591 0.868 0.723 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
44. SYT2 ENSG00000143858 2364 1.59 0.753 0.837 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
45. SOX1 ENSG00000182968 1339 1.588 0.776 0.812 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
46. CCDC85C ENSG00000205476 3808 1.573 0.713 0.860 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
47. NOTCH1 ENSG00000148400 5516 1.571 0.774 0.797 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
48. MIAT ENSG00000225783 2977 1.571 0.802 0.769 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
49. ZBTB16 ENSG00000109906 287 1.569 0.815 0.754 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
50. TOX3 ENSG00000103460 1758 1.561 0.789 0.772 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
51. FLJ12825 ENSG00000248265 822 1.548 0.704 0.844 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
52. OTP ENSG00000171540 179 1.546 0.774 0.772 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
53. JAM2 ENSG00000154721 1771 1.543 0.758 0.785 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
54. HES6 ENSG00000144485 4284 1.54 0.818 0.722 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
55. ARL4A ENSG00000122644 3071 1.535 0.744 0.791 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
56. LRIG1 ENSG00000144749, ENSG00000282243 1639 1.535 0.703 0.832 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
57. NEUROG1 ENSG00000181965 1244 1.526 0.731 0.795 neurogenin 1 [Source:HGNC Symbol;Acc:HGNC:7764]
58. GREB1 ENSG00000196208 4256 1.511 0.778 0.733 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
59. PRDM13 ENSG00000112238 312 1.51 0.771 0.739 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
60. HS6ST1 ENSG00000136720 4974 1.507 0.717 0.790 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
61. GLDC ENSG00000178445 513 1.506 0.747 0.759 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
62. PCDH8 ENSG00000136099 203 1.498 0.750 0.748 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
63. LINC00925 LINC00925 517 1.494 0.755 0.739
64. NOVA1 ENSG00000139910 5990 1.478 0.715 0.763 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
65. CXCR4 ENSG00000121966 4708 1.474 0.709 0.765 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
66. PAK3 ENSG00000077264 890 1.446 0.734 0.712 p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
67. MAP1B ENSG00000131711 44568 1.436 0.705 0.731 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
68. PTPRZ1 ENSG00000106278 1326 0.888 - 0.888 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
69. NUAK2 ENSG00000163545 538 0.884 - 0.884 NUAK family kinase 2 [Source:HGNC Symbol;Acc:HGNC:29558]
70. FGF19 ENSG00000162344 241 0.884 - 0.884 fibroblast growth factor 19 [Source:HGNC Symbol;Acc:HGNC:3675]
71. NRIP3 ENSG00000175352 238 0.864 - 0.864 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
72. IRX5 ENSG00000176842 2175 0.86 - 0.860 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
73. LINC01159 ENSG00000229743 210 0.857 - 0.857 long intergenic non-protein coding RNA 1159 [Source:HGNC Symbol;Acc:HGNC:49514]
74. ZIC2 ENSG00000043355 4457 0.852 0.852 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
75. GDF10 ENSG00000266524 711 0.847 0.847 - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
76. FZD3 ENSG00000104290 11650 0.845 0.845 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
77. IRX3 ENSG00000177508 7140 0.841 - 0.841 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]
78. CTNND2 ENSG00000169862 1640 0.838 0.838 - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
79. CCND1 ENSG00000110092 8014 0.828 - 0.828 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
80. GBX2 ENSG00000168505 227 0.824 - 0.824 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
81. NES ENSG00000132688 20034 0.824 - 0.824 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
82. ZIC4 ENSG00000174963 2667 0.822 0.822 - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
83. ROBO3 ENSG00000154134 1085 0.821 - 0.821 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
84. SOX21 ENSG00000125285 209 0.817 - 0.817 SRY-box 21 [Source:HGNC Symbol;Acc:HGNC:11197]
85. WSCD1 ENSG00000179314 1121 0.816 - 0.816 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
86. GPRC5B ENSG00000167191 684 0.813 - 0.813 G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
87. ZIC1 ENSG00000152977 18260 0.81 0.810 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
88. UCP2 ENSG00000175567 1141 0.806 - 0.806 uncoupling protein 2 [Source:HGNC Symbol;Acc:HGNC:12518]
89. HOXB2 ENSG00000173917 6040 0.803 0.803 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
90. HOXB9 ENSG00000170689 2051 0.8 - 0.800 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
91. AXIN2 ENSG00000168646 2778 0.799 0.799 - axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
92. KLF13 ENSG00000169926, ENSG00000275746 3783 0.796 - 0.796 Kruppel like factor 13 [Source:NCBI gene;Acc:51621]
93. ENPP2 ENSG00000136960 3320 0.794 0.794 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
94. LFNG ENSG00000106003 1260 0.793 - 0.793 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
95. TMEM132B ENSG00000139364 1165 0.791 0.791 - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
96. SLC35F1 ENSG00000196376 658 0.788 - 0.788 solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
97. NDNF ENSG00000173376 2576 0.788 0.788 - neuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]
98. FAM107A ENSG00000168309 211 0.788 - 0.788 family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]
99. SLC6A8 ENSG00000130821 1625 0.787 - 0.787 solute carrier family 6 member 8 [Source:HGNC Symbol;Acc:HGNC:11055]
100. ZIC5 ENSG00000139800 441 0.785 0.785 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]

There are 89 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA