Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAX6

Gene Name Gene ID Reads Annotation
PAX6 ENSG00000007372 3710 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]



Genes with expression patterns similar to PAX6

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. PAX6 ENSG00000007372 3710 2 1.000 1.000 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
2. HES5 ENSG00000197921, ENSG00000273529 9293 1.819 0.902 0.917 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
3. FAM181A ENSG00000140067, ENSG00000273533 1757 1.814 0.877 0.937 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
4. NRARP ENSG00000198435 1658 1.806 0.911 0.895 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
5. SLC1A2 ENSG00000110436 1231 1.795 0.904 0.891 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
6. SOX3 ENSG00000134595 5297 1.793 0.876 0.917 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
7. LOC440896 652 1.783 0.915 0.868 uncharacterized LOC440896
8. OTP ENSG00000171540 179 1.769 0.843 0.926 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
9. NEUROG1 ENSG00000181965 1244 1.753 0.840 0.913 neurogenin 1 [Source:HGNC Symbol;Acc:HGNC:7764]
10. LINC01158 1332 1.75 0.827 0.923 long intergenic non-protein coding RNA 1158, transcript variant 4
11. PDPN ENSG00000162493 5095 1.732 0.847 0.885 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
12. LOC100240734 1898 1.717 0.860 0.857 uncharacterized LOC100240734
13. RHBDL3 ENSG00000141314 2571 1.71 0.838 0.872 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
14. MYCL ENSG00000116990 1128 1.704 0.822 0.882 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
15. LHX5-AS1 ENSG00000257935 271 1.696 0.849 0.847 LHX5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49570]
16. RGS20 ENSG00000147509 282 1.687 0.756 0.931 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
17. HOXB-AS3 ENSG00000233101 1776 1.676 0.829 0.847 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
18. TSPAN18 ENSG00000157570 9391 1.67 0.831 0.839 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
19. LAMP5 ENSG00000125869 710 1.666 0.808 0.858 lysosomal associated membrane protein family member 5 [Source:HGNC Symbol;Acc:HGNC:16097]
20. POU3F2 ENSG00000184486 2683 1.662 0.826 0.836 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
21. SEMA5B ENSG00000082684 2716 1.661 0.791 0.870 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
22. KLHDC8A ENSG00000162873 2265 1.655 0.766 0.889 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
23. DBX2 ENSG00000185610 85 1.653 0.810 0.843 developing brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:33186]
24. CSPG5 ENSG00000114646 558 1.648 0.807 0.841 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
25. TMEM132B ENSG00000139364 1165 1.645 0.852 0.793 transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
26. SOX2 ENSG00000181449 19791 1.631 0.850 0.781 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
27. TKTL1 ENSG00000007350 1212 1.626 0.839 0.787 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
28. CKB ENSG00000166165 54181 1.625 0.813 0.812 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
29. SLITRK2 ENSG00000185985 905 1.616 0.853 0.763 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
30. PRDM12 ENSG00000130711 720 1.615 0.786 0.829 PR/SET domain 12 [Source:HGNC Symbol;Acc:HGNC:13997]
31. SCUBE2 ENSG00000175356 1730 1.604 0.815 0.789 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
32. FGFBP3 ENSG00000174721 4234 1.6 0.733 0.867 fibroblast growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:23428]
33. C8orf46 375 1.583 0.753 0.830 chromosome 8 open reading frame 46
34. BHLHE22 ENSG00000180828 179 1.58 0.718 0.862 basic helix-loop-helix family member e22 [Source:HGNC Symbol;Acc:HGNC:11963]
35. DTX4 ENSG00000110042 2639 1.568 0.803 0.765 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
36. SLC2A1 ENSG00000117394 2892 1.568 0.783 0.785 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
37. SUSD2 ENSG00000099994 588 1.555 0.736 0.819 sushi domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30667]
38. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.543 0.791 0.752 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
39. AGO1 ENSG00000092847 2525 1.537 0.738 0.799 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
40. CRNDE ENSG00000245694 3754 1.536 0.776 0.760 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
41. RND2 ENSG00000108830 3761 1.536 0.755 0.781 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
42. PLP1 ENSG00000123560 2266 1.532 0.714 0.818 proteolipid protein 1 [Source:HGNC Symbol;Acc:HGNC:9086]
43. TOX3 ENSG00000103460 1758 1.528 0.788 0.740 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
44. SYT2 ENSG00000143858 2364 1.517 0.775 0.742 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
45. FMN2 ENSG00000155816 1062 1.516 0.771 0.745 formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
46. DPYSL5 ENSG00000157851 6855 1.51 0.719 0.791 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
47. LINC00461 ENSG00000245526 4465 1.508 0.750 0.758 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
48. GLDC ENSG00000178445 513 1.5 0.766 0.734 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
49. HEYL ENSG00000163909 2647 1.495 0.750 0.745 hes related family bHLH transcription factor with YRPW motif-like [Source:HGNC Symbol;Acc:HGNC:4882]
50. CRABP1 ENSG00000166426 2178 1.492 0.786 0.706 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
51. PCDH8 ENSG00000136099 203 1.48 0.723 0.757 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
52. NOTCH1 ENSG00000148400 5516 1.475 0.770 0.705 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
53. ZBTB16 ENSG00000109906 287 1.469 0.738 0.731 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
54. SOX1 ENSG00000182968 1339 1.458 0.737 0.721 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
55. GREB1 ENSG00000196208 4256 1.453 0.734 0.719 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
56. LOC400043 4859 1.426 0.720 0.706 uncharacterized LOC400043
57. DLL1 ENSG00000198719, ENSG00000275555 1642 0.909 0.909 - delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
58. NRIP3 ENSG00000175352 238 0.903 - 0.903 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
59. ZIC2 ENSG00000043355 4457 0.901 0.901 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
60. CELSR2 ENSG00000143126 3566 0.871 - 0.871 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
61. ZIC4 ENSG00000174963 2667 0.867 0.867 - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
62. SRGAP3 ENSG00000196220 5297 0.864 - 0.864 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
63. HOXB2 ENSG00000173917 6040 0.863 0.863 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
64. APCDD1 ENSG00000154856 2448 0.858 0.858 - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
65. RGMA ENSG00000182175 3405 0.85 - 0.850 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
66. GDF10 ENSG00000266524 711 0.842 0.842 - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
67. ROBO3 ENSG00000154134 1085 0.838 - 0.838 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
68. FAM181B ENSG00000182103 461 0.833 - 0.833 family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
69. IRX5 ENSG00000176842 2175 0.831 - 0.831 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
70. IRX3 ENSG00000177508 7140 0.828 - 0.828 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]
71. FGF19 ENSG00000162344 241 0.826 - 0.826 fibroblast growth factor 19 [Source:HGNC Symbol;Acc:HGNC:3675]
72. AXIN2 ENSG00000168646 2778 0.82 0.820 - axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
73. CDH4 ENSG00000179242, ENSG00000280641 1069 0.816 - 0.816 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
74. ZIC1 ENSG00000152977 18260 0.813 0.813 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
75. IGDCC3 ENSG00000174498 26431 0.809 - 0.809 immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
76. NHLH1 ENSG00000171786 4811 0.805 - 0.805 nescient helix-loop-helix 1 [Source:HGNC Symbol;Acc:HGNC:7817]
77. WNT7A ENSG00000154764 131 0.804 0.804 - Wnt family member 7A [Source:HGNC Symbol;Acc:HGNC:12786]
78. INSM1 ENSG00000173404 3113 0.803 - 0.803 INSM transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:6090]
79. CTNND2 ENSG00000169862 1640 0.801 0.801 - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
80. IGFBPL1 ENSG00000137142 3283 0.799 0.799 - insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
81. HOXB3 ENSG00000120093 4812 0.798 0.798 - homeobox B3 [Source:HGNC Symbol;Acc:HGNC:5114]
82. MIAT ENSG00000225783 2977 0.797 - 0.797 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
83. LRIG1 ENSG00000144749, ENSG00000282243 1639 0.794 - 0.794 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
84. ASRGL1 ENSG00000162174 4293 0.793 - 0.793 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
85. MSI1 ENSG00000135097 6935 0.792 0.792 - musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
86. SOX21 ENSG00000125285 209 0.789 - 0.789 SRY-box 21 [Source:HGNC Symbol;Acc:HGNC:11197]
87. FGFR3 ENSG00000068078 2862 0.783 - 0.783 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
88. LGR5 ENSG00000139292 455 0.783 - 0.783 leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
89. NHLH2 ENSG00000177551 1191 0.781 - 0.781 nescient helix-loop-helix 2 [Source:HGNC Symbol;Acc:HGNC:7818]
90. CPLX2 ENSG00000145920 573 0.781 - 0.781 complexin 2 [Source:HGNC Symbol;Acc:HGNC:2310]
91. SLC35F1 ENSG00000196376 658 0.779 - 0.779 solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
92. ZNF48 ENSG00000180035 2149 0.775 - 0.775 zinc finger protein 48 [Source:HGNC Symbol;Acc:HGNC:13114]
93. CCND1 ENSG00000110092 8014 0.775 - 0.775 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
94. UCP2 ENSG00000175567 1141 0.773 - 0.773 uncoupling protein 2 [Source:HGNC Symbol;Acc:HGNC:12518]
95. ADGRG2 ENSG00000173698 87 0.771 - 0.771 adhesion G protein-coupled receptor G2 [Source:HGNC Symbol;Acc:HGNC:4516]
96. KAL1 KAL1 2390 0.77 0.770 -
97. RPL9 ENSG00000163682 177590 0.767 0.767 - ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
98. ZIC3 ENSG00000156925 420 0.767 0.767 - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
99. PTPRZ1 ENSG00000106278 1326 0.765 - 0.765 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
100. FAM167A ENSG00000154319 299 0.764 0.764 - family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]

There are 68 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA