Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA5B

Gene Name Gene ID Reads Annotation
SEMA5B ENSG00000082684 2716 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]



Genes with expression patterns similar to SEMA5B

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SEMA5B ENSG00000082684 2716 2 1.000 1.000 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
2. RHBDL3 ENSG00000141314 2571 1.799 0.869 0.930 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
3. SOX2 ENSG00000181449 19791 1.754 0.851 0.903 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
4. LOC100240734 1898 1.753 0.832 0.921 uncharacterized LOC100240734
5. CKB ENSG00000166165 54181 1.748 0.856 0.892 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
6. POU3F2 ENSG00000184486 2683 1.746 0.856 0.890 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
7. SOX3 ENSG00000134595 5297 1.726 0.841 0.885 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
8. HES5 ENSG00000197921, ENSG00000273529 9293 1.725 0.827 0.898 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
9. DTX4 ENSG00000110042 2639 1.711 0.856 0.855 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
10. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.707 0.832 0.875 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
11. NRARP ENSG00000198435 1658 1.706 0.821 0.885 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
12. SRGAP3 ENSG00000196220 5297 1.704 0.785 0.919 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
13. FAM181A ENSG00000140067, ENSG00000273533 1757 1.703 0.806 0.897 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
14. HOXB-AS3 ENSG00000233101 1776 1.698 0.823 0.875 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
15. LINC00461 ENSG00000245526 4465 1.692 0.814 0.878 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
16. SYT2 ENSG00000143858 2364 1.687 0.792 0.895 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
17. PDPN ENSG00000162493 5095 1.687 0.808 0.879 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
18. MSI1 ENSG00000135097 6935 1.68 0.839 0.841 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
19. SLC1A2 ENSG00000110436 1231 1.673 0.795 0.878 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
20. TSPAN18 ENSG00000157570 9391 1.663 0.764 0.899 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
21. PAX6 ENSG00000007372 3710 1.661 0.791 0.870 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
22. NOTCH1 ENSG00000148400 5516 1.66 0.805 0.855 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
23. DLL1 ENSG00000198719, ENSG00000275555 1642 1.656 0.862 0.794 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
24. MIAT ENSG00000225783 2977 1.648 0.763 0.885 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
25. DPYSL5 ENSG00000157851 6855 1.647 0.787 0.860 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
26. TKTL1 ENSG00000007350 1212 1.639 0.800 0.839 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
27. GLDC ENSG00000178445 513 1.625 0.772 0.853 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
28. SCUBE2 ENSG00000175356 1730 1.621 0.776 0.845 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
29. LINC01158 1332 1.618 0.766 0.852 long intergenic non-protein coding RNA 1158, transcript variant 4
30. RND2 ENSG00000108830 3761 1.617 0.761 0.856 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
31. IGFBPL1 ENSG00000137142 3283 1.615 0.779 0.836 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
32. CSPG5 ENSG00000114646 558 1.615 0.762 0.853 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
33. HS6ST1 ENSG00000136720 4974 1.604 0.769 0.835 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
34. KLHDC8A ENSG00000162873 2265 1.6 0.749 0.851 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
35. CRABP1 ENSG00000166426 2178 1.597 0.769 0.828 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
36. MYCL ENSG00000116990 1128 1.593 0.711 0.882 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
37. SLC2A1 ENSG00000117394 2892 1.589 0.747 0.842 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
38. SOX1 ENSG00000182968 1339 1.588 0.723 0.865 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
39. SYT11 ENSG00000132718 3832 1.586 0.753 0.833 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
40. RGMA ENSG00000182175 3405 1.577 0.747 0.830 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
41. MIR124-2HG ENSG00000254377 940 1.573 0.700 0.873 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
42. ASRGL1 ENSG00000162174 4293 1.572 0.711 0.861 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
43. GREB1 ENSG00000196208 4256 1.57 0.750 0.820 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
44. TOX3 ENSG00000103460 1758 1.567 0.798 0.769 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
45. FGFR3 ENSG00000068078 2862 1.559 0.756 0.803 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
46. ARL4A ENSG00000122644 3071 1.559 0.763 0.796 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
47. KLF13 ENSG00000169926, ENSG00000275746 3783 1.556 0.720 0.836 Kruppel like factor 13 [Source:NCBI gene;Acc:51621]
48. ZBTB16 ENSG00000109906 287 1.553 0.720 0.833 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
49. JAM2 ENSG00000154721 1771 1.553 0.744 0.809 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
50. SLITRK2 ENSG00000185985 905 1.547 0.807 0.740 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
51. HES6 ENSG00000144485 4284 1.538 0.768 0.770 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
52. CRNDE ENSG00000245694 3754 1.538 0.777 0.761 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
53. CXCR4 ENSG00000121966 4708 1.524 0.723 0.801 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
54. AGO1 ENSG00000092847 2525 1.518 0.742 0.776 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
55. OTP ENSG00000171540 179 1.51 0.728 0.782 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
56. FLJ12825 ENSG00000248265 822 1.508 0.736 0.772 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
57. PRDM13 ENSG00000112238 312 1.461 0.725 0.736 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
58. FZD10 ENSG00000111432 608 1.425 0.714 0.711 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
59. CELSR2 ENSG00000143126 3566 0.935 - 0.935 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
60. ROBO3 ENSG00000154134 1085 0.905 - 0.905 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
61. LFNG ENSG00000106003 1260 0.888 - 0.888 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
62. NES ENSG00000132688 20034 0.876 - 0.876 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
63. CCDC85C ENSG00000205476 3808 0.876 - 0.876 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
64. RGS20 ENSG00000147509 282 0.872 - 0.872 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
65. ZIC2 ENSG00000043355 4457 0.863 0.863 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
66. NUAK2 ENSG00000163545 538 0.862 - 0.862 NUAK family kinase 2 [Source:HGNC Symbol;Acc:HGNC:29558]
67. IRX5 ENSG00000176842 2175 0.86 - 0.860 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
68. LINC00925 LINC00925 517 0.859 - 0.859
69. ZIC4 ENSG00000174963 2667 0.858 0.858 - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
70. NRIP3 ENSG00000175352 238 0.851 - 0.851 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
71. GBX2 ENSG00000168505 227 0.849 - 0.849 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
72. HOXB2 ENSG00000173917 6040 0.846 0.846 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
73. RASSF2 ENSG00000101265 1157 0.843 - 0.843 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
74. PTPRZ1 ENSG00000106278 1326 0.841 - 0.841 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
75. ZIC1 ENSG00000152977 18260 0.838 0.838 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
76. HOXB3 ENSG00000120093 4812 0.836 0.836 - homeobox B3 [Source:HGNC Symbol;Acc:HGNC:5114]
77. CDH4 ENSG00000179242, ENSG00000280641 1069 0.831 - 0.831 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
78. LRIG1 ENSG00000144749, ENSG00000282243 1639 0.83 - 0.830 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
79. NEUROG1 ENSG00000181965 1244 0.828 - 0.828 neurogenin 1 [Source:HGNC Symbol;Acc:HGNC:7764]
80. ZIC5 ENSG00000139800 441 0.826 0.826 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
81. NAT8L ENSG00000185818 278 0.824 - 0.824 N-acetyltransferase 8 like [Source:HGNC Symbol;Acc:HGNC:26742]
82. HOXD3 ENSG00000128652 1324 0.824 - 0.824 homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
83. POU4F2 ENSG00000151615 74 0.817 - 0.817 POU class 4 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9219]
84. FZD3 ENSG00000104290 11650 0.814 0.814 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
85. FAM181B ENSG00000182103 461 0.812 - 0.812 family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
86. RFX4 ENSG00000111783 1382 0.811 0.811 - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
87. FAM107A ENSG00000168309 211 0.808 - 0.808 family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]
88. PCDH8 ENSG00000136099 203 0.808 - 0.808 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
89. WSCD1 ENSG00000179314 1121 0.808 - 0.808 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
90. CCND1 ENSG00000110092 8014 0.807 - 0.807 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
91. IGDCC3 ENSG00000174498 26431 0.805 - 0.805 immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
92. NOVA1 ENSG00000139910 5990 0.804 - 0.804 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
93. ENPP2 ENSG00000136960 3320 0.803 0.803 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
94. LAMC3 ENSG00000050555 1951 0.802 0.802 - laminin subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:6494]
95. IRX3 ENSG00000177508 7140 0.801 - 0.801 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]
96. ZIC3 ENSG00000156925 420 0.799 0.799 - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
97. FAM219A ENSG00000164970 1747 0.795 - 0.795 family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
98. EPB41L4A ENSG00000129595 645 0.794 - 0.794 erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
99. PAX7 ENSG00000009709 810 0.789 - 0.789 paired box 7 [Source:HGNC Symbol;Acc:HGNC:8621]
100. ARL4C ENSG00000188042 5437 0.788 - 0.788 ADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]

There are 94 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA