Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH3

Gene Name Gene ID Reads Annotation
CDH3 ENSG00000062038 5449 cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]



Genes with expression patterns similar to CDH3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. CDH3 ENSG00000062038 5449 2 1.000 1.000 cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]
2. ALDH1A2 ENSG00000128918 11780 0.881 0.881 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
3. CRISPLD2 ENSG00000103196 2911 0.865 0.865 - cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
4. KRT8 ENSG00000170421 12050 0.848 0.848 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
5. PITX1 ENSG00000069011 817 0.844 0.844 - paired like homeodomain 1 [Source:HGNC Symbol;Acc:HGNC:9004]
6. SCUBE3 ENSG00000146197 4847 0.832 0.832 - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
7. SVEP1 ENSG00000165124 1854 0.831 0.831 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
8. KCTD12 ENSG00000178695 23035 0.831 0.831 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
9. AHNAK ENSG00000124942 11800 0.826 0.826 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
10. FLRT3 ENSG00000125848 10097 0.811 0.811 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
11. HAND2 ENSG00000164107 5416 0.805 0.805 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
12. KRT18 ENSG00000111057 1738 0.804 0.804 - keratin 18 [Source:HGNC Symbol;Acc:HGNC:6430]
13. COL1A2 ENSG00000164692 43340 0.801 0.801 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
14. FRAS1 ENSG00000138759 3662 0.8 0.800 - Fraser extracellular matrix complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19185]
15. PGM5 ENSG00000154330 1251 0.799 0.799 - phosphoglucomutase 5 [Source:HGNC Symbol;Acc:HGNC:8908]
16. POSTN ENSG00000133110 5228 0.794 0.794 - periostin [Source:HGNC Symbol;Acc:HGNC:16953]
17. GPC3 ENSG00000147257 34465 0.792 0.792 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
18. KRT19 ENSG00000171345 1700 0.791 0.791 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
19. IFITM3 ENSG00000142089 57239 0.784 0.784 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
20. WT1 ENSG00000184937 5369 0.781 0.781 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
21. SPARC ENSG00000113140 39707 0.78 0.780 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
22. PHACTR2 ENSG00000112419 13720 0.779 0.779 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
23. ATP2B4 ENSG00000058668 5432 0.775 0.775 - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
24. COL6A1 ENSG00000142156 20649 0.775 0.775 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
25. MAP3K1 ENSG00000095015 8341 0.773 0.773 - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
26. ANXA11 ENSG00000122359 3726 0.773 0.773 - annexin A11 [Source:HGNC Symbol;Acc:HGNC:535]
27. NPC2 ENSG00000119655 5889 0.773 0.773 - NPC intracellular cholesterol transporter 2 [Source:HGNC Symbol;Acc:HGNC:14537]
28. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.769 0.769 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
29. IGFBP7 ENSG00000163453 5320 0.766 0.766 - insulin like growth factor binding protein 7 [Source:HGNC Symbol;Acc:HGNC:5476]
30. MYL9 ENSG00000101335 4604 0.765 0.765 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
31. ITGA8 ENSG00000077943 1889 0.765 0.765 - integrin subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:6144]
32. COL1A1 ENSG00000108821 71290 0.764 0.764 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
33. COL5A1 ENSG00000130635 11942 0.76 0.760 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
34. PEG3 ENSG00000198300 11207 0.76 0.760 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
35. FOS ENSG00000170345 1363 0.756 0.756 - Fos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]
36. RFTN1 ENSG00000131378 3531 0.756 0.756 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
37. RBPMS ENSG00000157110 10094 0.755 0.755 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
38. TIMP1 ENSG00000102265 19585 0.753 0.753 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
39. S100A11 ENSG00000163191 11475 0.753 0.753 - S100 calcium binding protein A11 [Source:HGNC Symbol;Acc:HGNC:10488]
40. DMKN ENSG00000161249 3603 0.752 0.752 - dermokine [Source:HGNC Symbol;Acc:HGNC:25063]
41. TWIST2 ENSG00000233608 3167 0.751 0.751 - twist family bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:20670]
42. NFIB ENSG00000147862 8306 0.75 0.750 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
43. MKL2 18184 0.749 0.749 - MKL1/myocardin like 2, transcript variant X15
44. BMP4 ENSG00000125378 10639 0.746 0.746 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
45. CSRP1 ENSG00000159176 5731 0.745 0.745 - cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
46. APOE ENSG00000130203 3263 0.745 0.745 - apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]
47. GATA3 ENSG00000107485 2433 0.743 0.743 - GATA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:4172]
48. ROR1 ENSG00000185483 9648 0.742 0.742 - receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
49. HOGA1 ENSG00000241935 221 0.742 0.742 - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
50. IRF2BPL ENSG00000119669 4042 0.742 0.742 - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
51. GNG12 ENSG00000172380 3600 0.742 0.742 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
52. DSP ENSG00000096696 5097 0.74 0.740 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
53. ALX1 ENSG00000180318 659 0.739 0.739 - ALX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1494]
54. CNTN4 ENSG00000144619 2198 0.738 0.738 - contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
55. PDGFA ENSG00000197461 1063 0.736 0.736 - platelet derived growth factor subunit A [Source:HGNC Symbol;Acc:HGNC:8799]
56. KIAA1217 ENSG00000120549 3036 0.736 0.736 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
57. EMX2 ENSG00000170370 2752 0.731 0.731 - empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3341]
58. PDE11A ENSG00000128655, ENSG00000284741 1225 0.729 0.729 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
59. FARP1 ENSG00000152767 7591 0.729 0.729 - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:HGNC Symbol;Acc:HGNC:3591]
60. DPP4 ENSG00000197635 430 0.728 0.728 - dipeptidyl peptidase 4 [Source:HGNC Symbol;Acc:HGNC:3009]
61. COL3A1 ENSG00000168542 140021 0.728 0.728 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
62. AMOT ENSG00000126016 13416 0.727 0.727 - angiomotin [Source:HGNC Symbol;Acc:HGNC:17810]
63. SPINT2 ENSG00000167642 25745 0.725 0.725 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
64. MEIS1 ENSG00000143995 11216 0.725 0.725 - Meis homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7000]
65. SFRP1 ENSG00000104332 280077 0.724 0.724 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
66. DACT2 ENSG00000164488 2086 0.724 0.724 - dishevelled binding antagonist of beta catenin 2 [Source:HGNC Symbol;Acc:HGNC:21231]
67. FHL2 ENSG00000115641 3164 0.72 0.720 - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
68. GRN ENSG00000030582 15538 0.72 0.720 - granulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]
69. SLC25A30 ENSG00000174032 832 0.719 0.719 - solute carrier family 25 member 30 [Source:HGNC Symbol;Acc:HGNC:27371]
70. ST7 ENSG00000004866 2439 0.718 0.718 - suppression of tumorigenicity 7 [Source:HGNC Symbol;Acc:HGNC:11351]
71. HSPB1 ENSG00000106211 26988 0.717 0.717 - heat shock protein family B (small) member 1 [Source:HGNC Symbol;Acc:HGNC:5246]
72. TRANK1 ENSG00000168016 5941 0.716 0.716 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
73. NFIA ENSG00000162599 3382 0.715 0.715 - nuclear factor I A [Source:HGNC Symbol;Acc:HGNC:7784]
74. FREM2 ENSG00000150893 3376 0.714 0.714 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
75. SLC7A8 ENSG00000092068 345 0.713 0.713 - solute carrier family 7 member 8 [Source:HGNC Symbol;Acc:HGNC:11066]
76. PAX8 ENSG00000125618 1203 0.713 0.713 - paired box 8 [Source:HGNC Symbol;Acc:HGNC:8622]
77. TSHZ2 ENSG00000182463 10473 0.713 0.713 - teashirt zinc finger homeobox 2 [Source:HGNC Symbol;Acc:HGNC:13010]
78. ARID5B ENSG00000150347 3004 0.712 0.712 - AT-rich interaction domain 5B [Source:HGNC Symbol;Acc:HGNC:17362]
79. EMX2OS ENSG00000229847 1926 0.712 0.712 - EMX2 opposite strand/antisense RNA [Source:HGNC Symbol;Acc:HGNC:18511]
80. REC8 ENSG00000100918, ENSG00000285007 6786 0.707 0.707 - REC8 meiotic recombination protein [Source:HGNC Symbol;Acc:HGNC:16879]
81. PKIB ENSG00000135549 364 0.707 0.707 - cAMP-dependent protein kinase inhibitor beta [Source:HGNC Symbol;Acc:HGNC:9018]
82. MMP11 ENSG00000099953, ENSG00000275365 2049 0.706 0.706 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
83. TMEM26 ENSG00000196932 357 0.705 0.705 - transmembrane protein 26 [Source:HGNC Symbol;Acc:HGNC:28550]
84. PLAGL1 ENSG00000118495 6344 0.705 0.705 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
85. HOXD9 ENSG00000128709 398 0.705 0.705 - homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]
86. CA12 ENSG00000074410 930 0.703 0.703 - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
87. CFH ENSG00000000971 343 0.702 0.702 - complement factor H [Source:HGNC Symbol;Acc:HGNC:4883]
88. APOBEC3C ENSG00000244509 3066 0.701 0.701 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA