Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCUBE3

Gene Name Gene ID Reads Annotation
SCUBE3 ENSG00000146197 4847 signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]



Genes with expression patterns similar to SCUBE3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SCUBE3 ENSG00000146197 4847 2 1.000 1.000 signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
2. KCTD12 ENSG00000178695 23035 1.548 0.846 0.702 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
3. PITX1 ENSG00000069011 817 0.902 0.902 - paired like homeodomain 1 [Source:HGNC Symbol;Acc:HGNC:9004]
4. CRISPLD2 ENSG00000103196 2911 0.866 0.866 - cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
5. ALDH1A2 ENSG00000128918 11780 0.858 0.858 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
6. GATA3 ENSG00000107485 2433 0.857 0.857 - GATA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:4172]
7. CDH3 ENSG00000062038 5449 0.832 0.832 - cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]
8. SVEP1 ENSG00000165124 1854 0.813 0.813 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
9. KRT8 ENSG00000170421 12050 0.812 0.812 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
10. AHNAK ENSG00000124942 11800 0.812 0.812 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
11. S100A11 ENSG00000163191 11475 0.812 0.812 - S100 calcium binding protein A11 [Source:HGNC Symbol;Acc:HGNC:10488]
12. IFITM3 ENSG00000142089 57239 0.811 0.811 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
13. NFIB ENSG00000147862 8306 0.809 0.809 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
14. KRT18 ENSG00000111057 1738 0.809 0.809 - keratin 18 [Source:HGNC Symbol;Acc:HGNC:6430]
15. TSHZ2 ENSG00000182463 10473 0.805 0.805 - teashirt zinc finger homeobox 2 [Source:HGNC Symbol;Acc:HGNC:13010]
16. NFIA ENSG00000162599 3382 0.803 0.803 - nuclear factor I A [Source:HGNC Symbol;Acc:HGNC:7784]
17. COL6A1 ENSG00000142156 20649 0.801 0.801 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
18. ADD3 ENSG00000148700 7732 0.8 0.800 - adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
19. ATP2B4 ENSG00000058668 5432 0.799 0.799 - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
20. MYL9 ENSG00000101335 4604 0.798 0.798 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
21. RBMS1 ENSG00000153250 11118 0.797 0.797 - RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]
22. CSRP1 ENSG00000159176 5731 0.796 0.796 - cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
23. FLRT3 ENSG00000125848 10097 0.793 0.793 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
24. COL5A1 ENSG00000130635 11942 0.792 0.792 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
25. HOGA1 ENSG00000241935 221 0.791 0.791 - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
26. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.791 0.791 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
27. DACT2 ENSG00000164488 2086 0.785 0.785 - dishevelled binding antagonist of beta catenin 2 [Source:HGNC Symbol;Acc:HGNC:21231]
28. MKL2 18184 0.783 0.783 - MKL1/myocardin like 2, transcript variant X15
29. KRT19 ENSG00000171345 1700 0.778 0.778 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
30. DSP ENSG00000096696 5097 0.775 0.775 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
31. ZNF503 ENSG00000165655, ENSG00000270087 26304 0.771 0.771 - zinc finger protein 503 [Source:NCBI gene;Acc:84858]
32. IGFBP7 ENSG00000163453 5320 0.77 0.770 - insulin like growth factor binding protein 7 [Source:HGNC Symbol;Acc:HGNC:5476]
33. SOX6 ENSG00000110693 4046 0.769 0.769 - SRY-box 6 [Source:HGNC Symbol;Acc:HGNC:16421]
34. APOE ENSG00000130203 3263 0.768 0.768 - apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]
35. RHOBTB3 ENSG00000164292 20064 0.767 0.767 - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
36. IGF1 ENSG00000017427 1357 0.765 0.765 - insulin like growth factor 1 [Source:HGNC Symbol;Acc:HGNC:5464]
37. NPC2 ENSG00000119655 5889 0.765 0.765 - NPC intracellular cholesterol transporter 2 [Source:HGNC Symbol;Acc:HGNC:14537]
38. PGM5 ENSG00000154330 1251 0.764 0.764 - phosphoglucomutase 5 [Source:HGNC Symbol;Acc:HGNC:8908]
39. COL1A2 ENSG00000164692 43340 0.764 0.764 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
40. ALX1 ENSG00000180318 659 0.763 0.763 - ALX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1494]
41. HAND2 ENSG00000164107 5416 0.763 0.763 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
42. HOXA10 ENSG00000253293 78 0.762 0.762 - homeobox A10 [Source:HGNC Symbol;Acc:HGNC:5100]
43. EMCN ENSG00000164035 2329 0.761 0.761 - endomucin [Source:HGNC Symbol;Acc:HGNC:16041]
44. BMP4 ENSG00000125378 10639 0.761 0.761 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
45. CA12 ENSG00000074410 930 0.759 0.759 - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
46. FRAS1 ENSG00000138759 3662 0.758 0.758 - Fraser extracellular matrix complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19185]
47. DMKN ENSG00000161249 3603 0.757 0.757 - dermokine [Source:HGNC Symbol;Acc:HGNC:25063]
48. CKAP4 ENSG00000136026 9372 0.756 0.756 - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
49. FNDC3B ENSG00000075420 3523 0.756 0.756 - fibronectin type III domain containing 3B [Source:HGNC Symbol;Acc:HGNC:24670]
50. EMX2OS ENSG00000229847 1926 0.756 0.756 - EMX2 opposite strand/antisense RNA [Source:HGNC Symbol;Acc:HGNC:18511]
51. GPC3 ENSG00000147257 34465 0.756 0.756 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
52. CUX1 ENSG00000257923 10777 0.755 0.755 - cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557]
53. STAT6 ENSG00000166888 2411 0.753 0.753 - signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]
54. B4GALT1 ENSG00000086062 3970 0.753 0.753 - beta-1,4-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:924]
55. SPARC ENSG00000113140 39707 0.752 0.752 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
56. PARD6B ENSG00000124171 972 0.75 0.750 - par-6 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:16245]
57. MAP3K1 ENSG00000095015 8341 0.749 0.749 - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
58. TRO ENSG00000067445 8412 0.747 0.747 - trophinin [Source:HGNC Symbol;Acc:HGNC:12326]
59. DCDC2 ENSG00000146038 407 0.746 0.746 - doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
60. KIAA1217 ENSG00000120549 3036 0.745 0.745 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
61. PDGFA ENSG00000197461 1063 0.744 0.744 - platelet derived growth factor subunit A [Source:HGNC Symbol;Acc:HGNC:8799]
62. ADRB3 ENSG00000188778 204 0.744 0.744 - adrenoceptor beta 3 [Source:HGNC Symbol;Acc:HGNC:288]
63. CNKSR3 ENSG00000153721 835 0.742 0.742 - CNKSR family member 3 [Source:HGNC Symbol;Acc:HGNC:23034]
64. NTRK2 ENSG00000148053 3870 0.742 0.742 - neurotrophic receptor tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:8032]
65. PKIB ENSG00000135549 364 0.742 0.742 - cAMP-dependent protein kinase inhibitor beta [Source:HGNC Symbol;Acc:HGNC:9018]
66. HYMAI ENSG00000283122 757 0.741 0.741 - hydatidiform mole associated and imprinted [Source:HGNC Symbol;Acc:HGNC:5326]
67. CEBPD ENSG00000221869 280 0.74 0.740 - CCAAT enhancer binding protein delta [Source:HGNC Symbol;Acc:HGNC:1835]
68. RBPMS ENSG00000157110 10094 0.739 0.739 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
69. PLAGL1 ENSG00000118495 6344 0.739 0.739 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
70. CYP26B1 ENSG00000003137 1237 0.739 0.739 - cytochrome P450 family 26 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:20581]
71. ITGA8 ENSG00000077943 1889 0.736 0.736 - integrin subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:6144]
72. STAB2 ENSG00000136011 322 0.735 0.735 - stabilin 2 [Source:HGNC Symbol;Acc:HGNC:18629]
73. PDE11A ENSG00000128655, ENSG00000284741 1225 0.734 0.734 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
74. RFTN1 ENSG00000131378 3531 0.734 0.734 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
75. COL1A1 ENSG00000108821 71290 0.734 0.734 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
76. CRYAB ENSG00000109846 1005 0.733 0.733 - crystallin alpha B [Source:HGNC Symbol;Acc:HGNC:2389]
77. ADAMTS18 ENSG00000140873 1075 0.733 0.733 - ADAM metallopeptidase with thrombospondin type 1 motif 18 [Source:HGNC Symbol;Acc:HGNC:17110]
78. ANXA11 ENSG00000122359 3726 0.731 0.731 - annexin A11 [Source:HGNC Symbol;Acc:HGNC:535]
79. MMP11 ENSG00000099953, ENSG00000275365 2049 0.731 0.731 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
80. POSTN ENSG00000133110 5228 0.731 0.731 - periostin [Source:HGNC Symbol;Acc:HGNC:16953]
81. PDGFRB ENSG00000113721 2455 0.73 0.730 - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
82. PHACTR2 ENSG00000112419 13720 0.73 0.730 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
83. CD74 ENSG00000019582 1778 0.729 0.729 - CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]
84. PVRL2 PVRL2 2781 0.729 0.729 -
85. WT1 ENSG00000184937 5369 0.729 0.729 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
86. TEAD3 ENSG00000007866 2898 0.729 0.729 - TEA domain transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11716]
87. MAL ENSG00000172005 637 0.729 0.729 - mal, T cell differentiation protein [Source:HGNC Symbol;Acc:HGNC:6817]
88. HOOK1 ENSG00000134709 873 0.728 0.728 - hook microtubule tethering protein 1 [Source:HGNC Symbol;Acc:HGNC:19884]
89. S1PR5 ENSG00000180739 274 0.726 0.726 - sphingosine-1-phosphate receptor 5 [Source:HGNC Symbol;Acc:HGNC:14299]
90. WSB1 ENSG00000109046 15068 0.726 0.726 - WD repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:19221]
91. PCDH9 ENSG00000184226 1058 0.723 0.723 - protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]
92. PNRC1 ENSG00000146278 5618 0.718 0.718 - proline rich nuclear receptor coactivator 1 [Source:HGNC Symbol;Acc:HGNC:17278]
93. TIMP1 ENSG00000102265 19585 0.717 0.717 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
94. FREM2 ENSG00000150893 3376 0.717 0.717 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
95. SLC7A8 ENSG00000092068 345 0.717 0.717 - solute carrier family 7 member 8 [Source:HGNC Symbol;Acc:HGNC:11066]
96. PEG3 ENSG00000198300 11207 0.717 0.717 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
97. FOS ENSG00000170345 1363 0.716 0.716 - Fos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]
98. MYH9 ENSG00000100345 12447 0.715 0.715 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]
99. DPP4 ENSG00000197635 430 0.714 0.714 - dipeptidyl peptidase 4 [Source:HGNC Symbol;Acc:HGNC:3009]
100. SPINT2 ENSG00000167642 25745 0.713 0.713 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]

There are 17 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA