Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBPMS

Gene Name Gene ID Reads Annotation
RBPMS ENSG00000157110 10094 RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]



Genes with expression patterns similar to RBPMS

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. RBPMS ENSG00000157110 10094 2 1.000 1.000 RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
2. IFITM3 ENSG00000142089 57239 1.587 0.852 0.735 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
3. JUP ENSG00000173801 5100 1.44 0.728 0.712 junction plakoglobin [Source:HGNC Symbol;Acc:HGNC:6207]
4. COL1A2 ENSG00000164692 43340 0.914 0.914 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
5. COL1A1 ENSG00000108821 71290 0.907 0.907 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
6. SPARC ENSG00000113140 39707 0.906 0.906 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
7. COL3A1 ENSG00000168542 140021 0.891 0.891 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
8. PDE3A ENSG00000172572 3123 0.881 0.881 - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
9. COL6A1 ENSG00000142156 20649 0.878 0.878 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
10. HAND2 ENSG00000164107 5416 0.872 0.872 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
11. COL6A2 ENSG00000142173 2550 0.863 0.863 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
12. GPC3 ENSG00000147257 34465 0.861 0.861 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
13. SVEP1 ENSG00000165124 1854 0.861 0.861 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
14. AHNAK ENSG00000124942 11800 0.86 0.860 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
15. SFRP1 ENSG00000104332 280077 0.859 0.859 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
16. KCTD12 ENSG00000178695 23035 0.855 0.855 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
17. GATA6 ENSG00000141448 3614 0.846 0.846 - GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
18. GATA5 ENSG00000130700 1069 0.845 0.845 - GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
19. KRT19 ENSG00000171345 1700 0.844 0.844 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
20. BAMBI ENSG00000095739 2641 0.844 0.844 - BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
21. PEG3 ENSG00000198300 11207 0.844 0.844 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
22. WT1 ENSG00000184937 5369 0.844 0.844 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
23. DSP ENSG00000096696 5097 0.842 0.842 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
24. PNKD ENSG00000127838 3640 0.838 0.838 - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
25. SHISA3 ENSG00000178343 7060 0.836 0.836 - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
26. GATA6-AS1 ENSG00000266010 839 0.836 0.836 - GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
27. NRK ENSG00000123572 4309 0.835 0.835 - Nik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]
28. COL5A1 ENSG00000130635 11942 0.832 0.832 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
29. GNG12 ENSG00000172380 3600 0.831 0.831 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
30. FREM2 ENSG00000150893 3376 0.829 0.829 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
31. SLC9A3R1 ENSG00000109062 4036 0.829 0.829 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
32. PLAGL1 ENSG00000118495 6344 0.829 0.829 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
33. TIMP1 ENSG00000102265 19585 0.828 0.828 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
34. PHACTR2 ENSG00000112419 13720 0.826 0.826 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
35. APOBEC3C ENSG00000244509 3066 0.826 0.826 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
36. MMP11 ENSG00000099953, ENSG00000275365 2049 0.825 0.825 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
37. DCN ENSG00000011465 12980 0.823 0.823 - decorin [Source:HGNC Symbol;Acc:HGNC:2705]
38. MYL9 ENSG00000101335 4604 0.822 0.822 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
39. TRABD2B ENSG00000269113 1426 0.819 0.819 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
40. TRANK1 ENSG00000168016 5941 0.819 0.819 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
41. ROR1 ENSG00000185483 9648 0.818 0.818 - receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
42. PVRL2 PVRL2 2781 0.817 0.817 -
43. SERINC5 ENSG00000164300 3838 0.817 0.817 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
44. KRT8 ENSG00000170421 12050 0.816 0.816 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
45. POSTN ENSG00000133110 5228 0.814 0.814 - periostin [Source:HGNC Symbol;Acc:HGNC:16953]
46. ITGA3 ENSG00000005884 402 0.811 0.811 - integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]
47. CNTN4 ENSG00000144619 2198 0.81 0.810 - contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
48. MYRF ENSG00000124920 5866 0.807 0.807 - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
49. SYTL5 ENSG00000147041 256 0.807 0.807 - synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589]
50. DMKN ENSG00000161249 3603 0.805 0.805 - dermokine [Source:HGNC Symbol;Acc:HGNC:25063]
51. PODXL ENSG00000128567 4375 0.805 0.805 - podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]
52. MYH9 ENSG00000100345 12447 0.805 0.805 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]
53. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.802 0.802 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
54. SPINT2 ENSG00000167642 25745 0.801 0.801 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
55. LAMC1 ENSG00000135862 20353 0.801 0.801 - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
56. RFTN1 ENSG00000131378 3531 0.796 0.796 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
57. PDE11A ENSG00000128655, ENSG00000284741 1225 0.796 0.796 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
58. RNF207 ENSG00000158286 362 0.795 0.795 - ring finger protein 207 [Source:HGNC Symbol;Acc:HGNC:32947]
59. RBMS1 ENSG00000153250 11118 0.794 0.794 - RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]
60. TEAD3 ENSG00000007866 2898 0.788 0.788 - TEA domain transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11716]
61. NFIC ENSG00000141905 3106 0.788 0.788 - nuclear factor I C [Source:HGNC Symbol;Acc:HGNC:7786]
62. NFIB ENSG00000147862 8306 0.788 0.788 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
63. CXCL12 ENSG00000107562 23857 0.787 0.787 - C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]
64. METTL7A ENSG00000185432 3430 0.785 0.785 - methyltransferase like 7A [Source:HGNC Symbol;Acc:HGNC:24550]
65. RHOBTB3 ENSG00000164292 20064 0.785 0.785 - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
66. TCF21 ENSG00000118526 1286 0.784 0.784 - transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]
67. MAGI2-AS3 ENSG00000234456 5066 0.784 0.784 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
68. MPPED2 ENSG00000066382 3879 0.784 0.784 - metallophosphoesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1180]
69. ATP2B4 ENSG00000058668 5432 0.783 0.783 - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
70. CKAP4 ENSG00000136026 9372 0.782 0.782 - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
71. ORAI3 ENSG00000175938 736 0.78 0.780 - ORAI calcium release-activated calcium modulator 3 [Source:HGNC Symbol;Acc:HGNC:28185]
72. LAMA5 ENSG00000130702 4073 0.78 0.780 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
73. BST2 ENSG00000130303 1588 0.779 0.779 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
74. ITGA8 ENSG00000077943 1889 0.779 0.779 - integrin subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:6144]
75. CCDC3 ENSG00000151468 3108 0.779 0.779 - coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
76. NFATC2 ENSG00000101096 898 0.777 0.777 - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
77. MATN2 ENSG00000132561 968 0.777 0.777 - matrilin 2 [Source:HGNC Symbol;Acc:HGNC:6908]
78. GRN ENSG00000030582 15538 0.774 0.774 - granulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]
79. ITM2C ENSG00000135916 51525 0.772 0.772 - integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
80. NPNT ENSG00000168743 749 0.771 0.771 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
81. BNC2 ENSG00000173068 7220 0.77 0.770 - basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]
82. TMEM245 ENSG00000106771 6332 0.77 0.770 - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
83. CD74 ENSG00000019582 1778 0.769 0.769 - CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]
84. CFH ENSG00000000971 343 0.769 0.769 - complement factor H [Source:HGNC Symbol;Acc:HGNC:4883]
85. IGFBP3 ENSG00000146674 2312 0.768 0.768 - insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]
86. CCDC85A ENSG00000055813 508 0.767 0.767 - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
87. MPP5 ENSG00000072415 2853 0.767 0.767 - membrane palmitoylated protein 5 [Source:HGNC Symbol;Acc:HGNC:18669]
88. BMP4 ENSG00000125378 10639 0.767 0.767 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
89. ALDH1A2 ENSG00000128918 11780 0.767 0.767 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
90. GUCY1A3 1501 0.766 0.766 - guanylate cyclase 1, soluble, alpha 3, transcript variant X7
91. CREB3L1 ENSG00000157613 755 0.766 0.766 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
92. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.765 0.765 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
93. ZNF185 ENSG00000147394 979 0.765 0.765 - zinc finger protein 185 with LIM domain [Source:HGNC Symbol;Acc:HGNC:12976]
94. DSG2 ENSG00000046604 4179 0.764 0.764 - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
95. TRPM5 ENSG00000070985 137 0.763 0.763 - transient receptor potential cation channel subfamily M member 5 [Source:HGNC Symbol;Acc:HGNC:14323]
96. ASPG ENSG00000166183 184 0.763 0.763 - asparaginase [Source:HGNC Symbol;Acc:HGNC:20123]
97. PPAP2B PPAP2B 5362 0.762 0.762 -
98. DUSP9 ENSG00000130829 1439 0.762 0.762 - dual specificity phosphatase 9 [Source:HGNC Symbol;Acc:HGNC:3076]
99. ANXA11 ENSG00000122359 3726 0.761 0.761 - annexin A11 [Source:HGNC Symbol;Acc:HGNC:535]
100. TWIST2 ENSG00000233608 3167 0.759 0.759 - twist family bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:20670]

There are 90 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA