Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL6A2

Gene Name Gene ID Reads Annotation
COL6A2 ENSG00000142173 2550 collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]



Genes with expression patterns similar to COL6A2

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. COL6A2 ENSG00000142173 2550 2 1.000 1.000 collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
2. COL1A1 ENSG00000108821 71290 1.736 0.940 0.796 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
3. TRANK1 ENSG00000168016 5941 1.62 0.847 0.773 tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
4. COL5A1 ENSG00000130635 11942 1.614 0.826 0.788 collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
5. IFITM3 ENSG00000142089 57239 1.574 0.813 0.761 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
6. PLAT ENSG00000104368 11877 1.524 0.762 0.762 plasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]
7. SFRP1 ENSG00000104332 280077 0.928 0.928 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
8. SPARC ENSG00000113140 39707 0.916 0.916 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
9. GATA6 ENSG00000141448 3614 0.912 0.912 - GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
10. HAND2 ENSG00000164107 5416 0.91 0.910 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
11. GATA6-AS1 ENSG00000266010 839 0.906 0.906 - GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
12. BAMBI ENSG00000095739 2641 0.901 0.901 - BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
13. CCDC3 ENSG00000151468 3108 0.896 0.896 - coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
14. PODXL ENSG00000128567 4375 0.896 0.896 - podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]
15. AHNAK ENSG00000124942 11800 0.895 0.895 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
16. SERINC5 ENSG00000164300 3838 0.894 0.894 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
17. COL1A2 ENSG00000164692 43340 0.891 0.891 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
18. COL3A1 ENSG00000168542 140021 0.89 0.890 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
19. BST2 ENSG00000130303 1588 0.889 0.889 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
20. FREM2 ENSG00000150893 3376 0.888 0.888 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
21. GATA5 ENSG00000130700 1069 0.881 0.881 - GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
22. SHISA3 ENSG00000178343 7060 0.88 0.880 - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
23. MYL9 ENSG00000101335 4604 0.878 0.878 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
24. ROR1 ENSG00000185483 9648 0.878 0.878 - receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
25. GUCY1A3 1501 0.876 0.876 - guanylate cyclase 1, soluble, alpha 3, transcript variant X7
26. IGFBP3 ENSG00000146674 2312 0.875 0.875 - insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]
27. NRK ENSG00000123572 4309 0.874 0.874 - Nik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]
28. PLAGL1 ENSG00000118495 6344 0.874 0.874 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
29. SMAD6 ENSG00000137834 805 0.874 0.874 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
30. MATN2 ENSG00000132561 968 0.874 0.874 - matrilin 2 [Source:HGNC Symbol;Acc:HGNC:6908]
31. KRT19 ENSG00000171345 1700 0.874 0.874 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
32. APOBEC3C ENSG00000244509 3066 0.872 0.872 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
33. MYRF ENSG00000124920 5866 0.865 0.865 - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
34. RBPMS ENSG00000157110 10094 0.863 0.863 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
35. TCF21 ENSG00000118526 1286 0.862 0.862 - transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]
36. GPC3 ENSG00000147257 34465 0.861 0.861 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
37. GNG12 ENSG00000172380 3600 0.859 0.859 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
38. COL6A1 ENSG00000142156 20649 0.857 0.857 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
39. RFTN1 ENSG00000131378 3531 0.855 0.855 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
40. SLC9A3R1 ENSG00000109062 4036 0.854 0.854 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
41. KRT8 ENSG00000170421 12050 0.85 0.850 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
42. DSP ENSG00000096696 5097 0.849 0.849 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
43. DLK1 ENSG00000185559 70813 0.847 0.847 - delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
44. TMEM26 ENSG00000196932 357 0.846 0.846 - transmembrane protein 26 [Source:HGNC Symbol;Acc:HGNC:28550]
45. PEG3 ENSG00000198300 11207 0.846 0.846 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
46. DCN ENSG00000011465 12980 0.845 0.845 - decorin [Source:HGNC Symbol;Acc:HGNC:2705]
47. TRABD2B ENSG00000269113 1426 0.843 0.843 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
48. MPP5 ENSG00000072415 2853 0.842 0.842 - membrane palmitoylated protein 5 [Source:HGNC Symbol;Acc:HGNC:18669]
49. LAMA5 ENSG00000130702 4073 0.839 0.839 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
50. SLC48A1 ENSG00000211584 2891 0.838 0.838 - solute carrier family 48 member 1 [Source:HGNC Symbol;Acc:HGNC:26035]
51. CREB3L1 ENSG00000157613 755 0.838 0.838 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
52. PDE3A ENSG00000172572 3123 0.836 0.836 - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
53. BMP4 ENSG00000125378 10639 0.835 0.835 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
54. SYTL5 ENSG00000147041 256 0.833 0.833 - synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589]
55. KCTD12 ENSG00000178695 23035 0.833 0.833 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
56. PLAC1 ENSG00000170965 302 0.832 0.832 - placenta specific 1 [Source:HGNC Symbol;Acc:HGNC:9044]
57. HAND1 ENSG00000113196 3661 0.83 0.830 - heart and neural crest derivatives expressed 1 [Source:HGNC Symbol;Acc:HGNC:4807]
58. DSG2 ENSG00000046604 4179 0.828 0.828 - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
59. PNKD ENSG00000127838 3640 0.826 0.826 - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
60. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.825 0.825 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
61. WT1 ENSG00000184937 5369 0.823 0.823 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
62. NPNT ENSG00000168743 749 0.823 0.823 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
63. ENPEP ENSG00000138792 1005 0.819 0.819 - glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
64. CYTL1 ENSG00000170891 869 0.816 0.816 - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
65. PDE11A ENSG00000128655, ENSG00000284741 1225 0.815 0.815 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
66. KLK6 ENSG00000167755 1069 0.814 0.814 - kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]
67. WNT2 ENSG00000105989 364 0.813 0.813 - Wnt family member 2 [Source:HGNC Symbol;Acc:HGNC:12780]
68. MAGI2-AS3 ENSG00000234456 5066 0.812 0.812 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
69. NPHS2 ENSG00000116218 6339 0.811 0.811 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
70. SVEP1 ENSG00000165124 1854 0.811 0.811 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
71. IL6ST ENSG00000134352 9416 0.811 0.811 - interleukin 6 signal transducer [Source:HGNC Symbol;Acc:HGNC:6021]
72. MYH9 ENSG00000100345 12447 0.81 0.810 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]
73. CD151 ENSG00000177697 7219 0.807 0.807 - CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]
74. PHACTR2 ENSG00000112419 13720 0.807 0.807 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
75. C1orf53 ENSG00000203724 485 0.806 0.806 - chromosome 1 open reading frame 53 [Source:HGNC Symbol;Acc:HGNC:30003]
76. GUCY1B3 1302 0.804 0.804 - guanylate cyclase 1, soluble, beta 3, transcript variant X5
77. MIR503HG ENSG00000223749 600 0.801 0.801 - MIR503 host gene [Source:HGNC Symbol;Acc:HGNC:28258]
78. UNC5C ENSG00000182168 3176 0.801 0.801 - unc-5 netrin receptor C [Source:HGNC Symbol;Acc:HGNC:12569]
79. ADAMTS9 ENSG00000163638 2110 0.801 0.801 - ADAM metallopeptidase with thrombospondin type 1 motif 9 [Source:HGNC Symbol;Acc:HGNC:13202]
80. NPHS1 ENSG00000161270 1427 0.799 0.799 - NPHS1, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]
81. TIMP1 ENSG00000102265 19585 0.798 0.798 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
82. SPINT2 ENSG00000167642 25745 0.798 0.798 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
83. MMP11 ENSG00000099953, ENSG00000275365 2049 0.798 0.798 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
84. MEG3 ENSG00000214548 19404 0.795 0.795 - maternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:14575]
85. ANXA2 ENSG00000182718 24280 0.795 0.795 - annexin A2 [Source:HGNC Symbol;Acc:HGNC:537]
86. CLIC5 ENSG00000112782 1596 0.795 0.795 - chloride intracellular channel 5 [Source:HGNC Symbol;Acc:HGNC:13517]
87. CNTN4 ENSG00000144619 2198 0.794 0.794 - contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
88. CTSB ENSG00000164733 7440 0.792 0.792 - cathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]
89. GADD45A ENSG00000116717 1743 0.79 0.790 - growth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]
90. SGCG ENSG00000102683 246 0.789 0.789 - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
91. LAMC1 ENSG00000135862 20353 0.786 0.786 - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
92. CTGF ENSG00000118523 4166 0.786 0.786 - connective tissue growth factor [Source:HGNC Symbol;Acc:HGNC:2500]
93. HLX ENSG00000136630 2104 0.785 0.785 - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
94. TRPM5 ENSG00000070985 137 0.784 0.784 - transient receptor potential cation channel subfamily M member 5 [Source:HGNC Symbol;Acc:HGNC:14323]
95. ST6GALNAC3 ENSG00000184005 9379 0.783 0.783 - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
96. TARID ENSG00000227954 125 0.782 0.782 - TCF21 antisense RNA inducing promoter demethylation [Source:HGNC Symbol;Acc:HGNC:50506]
97. TGFBR3 ENSG00000069702 8468 0.782 0.782 - transforming growth factor beta receptor 3 [Source:HGNC Symbol;Acc:HGNC:11774]
98. RNF207 ENSG00000158286 362 0.781 0.781 - ring finger protein 207 [Source:HGNC Symbol;Acc:HGNC:32947]
99. FAM65A 3785 0.781 0.781 - family with sequence similarity 65 member A, transcript variant X7
100. NPC2 ENSG00000119655 5889 0.78 0.780 - NPC intracellular cholesterol transporter 2 [Source:HGNC Symbol;Acc:HGNC:14537]

There are 116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA