Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL5A1

Gene Name Gene ID Reads Annotation
COL5A1 ENSG00000130635 11942 collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]



Genes with expression patterns similar to COL5A1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. COL5A1 ENSG00000130635 11942 2 1.000 1.000 collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
2. COL1A1 ENSG00000108821 71290 1.736 0.893 0.843 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
3. IFITM3 ENSG00000142089 57239 1.674 0.926 0.748 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
4. COL1A2 ENSG00000164692 43340 1.66 0.856 0.804 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
5. COL6A2 ENSG00000142173 2550 1.614 0.826 0.788 collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
6. SPARC ENSG00000113140 39707 1.598 0.875 0.723 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
7. GPC3 ENSG00000147257 34465 1.523 0.822 0.701 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
8. UNC5B ENSG00000107731 3573 1.5 0.772 0.728 unc-5 netrin receptor B [Source:HGNC Symbol;Acc:HGNC:12568]
9. PEAR1 ENSG00000187800 3067 1.418 0.705 0.713 platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
10. PHACTR2 ENSG00000112419 13720 0.897 0.897 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
11. TIMP1 ENSG00000102265 19585 0.896 0.896 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
12. MYL9 ENSG00000101335 4604 0.896 0.896 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
13. MYH9 ENSG00000100345 12447 0.888 0.888 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]
14. NFIB ENSG00000147862 8306 0.886 0.886 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
15. HAND2 ENSG00000164107 5416 0.864 0.864 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
16. RRAS ENSG00000126458 881 0.855 0.855 - RAS related [Source:HGNC Symbol;Acc:HGNC:10447]
17. CXCL12 ENSG00000107562 23857 0.855 0.855 - C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]
18. ITM2C ENSG00000135916 51525 0.853 0.853 - integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
19. PVRL2 PVRL2 2781 0.852 0.852 -
20. PXDN ENSG00000130508 44183 0.85 0.850 - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
21. SPINT2 ENSG00000167642 25745 0.85 0.850 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
22. RHOBTB3 ENSG00000164292 20064 0.846 0.846 - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
23. AHNAK ENSG00000124942 11800 0.846 0.846 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
24. COL6A1 ENSG00000142156 20649 0.846 0.846 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
25. RFTN1 ENSG00000131378 3531 0.843 0.843 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
26. KCTD12 ENSG00000178695 23035 0.842 0.842 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
27. MIR503HG ENSG00000223749 600 0.837 0.837 - MIR503 host gene [Source:HGNC Symbol;Acc:HGNC:28258]
28. FREM2 ENSG00000150893 3376 0.835 0.835 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
29. SNAI2 ENSG00000019549 22574 0.834 0.834 - snail family transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:11094]
30. MAGI2-AS3 ENSG00000234456 5066 0.833 0.833 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
31. RBPMS ENSG00000157110 10094 0.832 0.832 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
32. PITX1 ENSG00000069011 817 0.831 0.831 - paired like homeodomain 1 [Source:HGNC Symbol;Acc:HGNC:9004]
33. PLAGL1 ENSG00000118495 6344 0.829 0.829 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
34. NFIC ENSG00000141905 3106 0.829 0.829 - nuclear factor I C [Source:HGNC Symbol;Acc:HGNC:7786]
35. MMP11 ENSG00000099953, ENSG00000275365 2049 0.829 0.829 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
36. BMP4 ENSG00000125378 10639 0.828 0.828 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
37. STAT6 ENSG00000166888 2411 0.827 0.827 - signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]
38. GRN ENSG00000030582 15538 0.827 0.827 - granulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]
39. RBMS1 ENSG00000153250 11118 0.827 0.827 - RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]
40. DSP ENSG00000096696 5097 0.822 0.822 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
41. KRT19 ENSG00000171345 1700 0.821 0.821 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
42. TSHZ2 ENSG00000182463 10473 0.819 0.819 - teashirt zinc finger homeobox 2 [Source:HGNC Symbol;Acc:HGNC:13010]
43. FNDC3B ENSG00000075420 3523 0.818 0.818 - fibronectin type III domain containing 3B [Source:HGNC Symbol;Acc:HGNC:24670]
44. MAP3K1 ENSG00000095015 8341 0.815 0.815 - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
45. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.813 0.813 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
46. WT1 ENSG00000184937 5369 0.812 0.812 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
47. CDH9 ENSG00000113100 257 0.812 0.812 - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
48. PDGFRB ENSG00000113721 2455 0.811 0.811 - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
49. ATP2B4 ENSG00000058668 5432 0.81 0.810 - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
50. APOBEC3C ENSG00000244509 3066 0.81 0.810 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
51. GNG12 ENSG00000172380 3600 0.81 0.810 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
52. SVEP1 ENSG00000165124 1854 0.806 0.806 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
53. MXRA8 ENSG00000162576 6851 0.804 0.804 - matrix remodeling associated 8 [Source:HGNC Symbol;Acc:HGNC:7542]
54. CRISPLD2 ENSG00000103196 2911 0.803 0.803 - cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
55. CUX1 ENSG00000257923 10777 0.802 0.802 - cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557]
56. FHL2 ENSG00000115641 3164 0.802 0.802 - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
57. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.801 0.801 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
58. PEG3 ENSG00000198300 11207 0.801 0.801 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
59. FLRT3 ENSG00000125848 10097 0.8 0.800 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
60. CSRP1 ENSG00000159176 5731 0.799 0.799 - cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
61. CTGF ENSG00000118523 4166 0.797 0.797 - connective tissue growth factor [Source:HGNC Symbol;Acc:HGNC:2500]
62. CDKN1C ENSG00000129757, ENSG00000273707 21622 0.796 0.796 - cyclin dependent kinase inhibitor 1C [Source:HGNC Symbol;Acc:HGNC:1786]
63. ADD3 ENSG00000148700 7732 0.796 0.796 - adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
64. SERPINH1 ENSG00000149257 8264 0.794 0.794 - serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546]
65. SLC9A3R1 ENSG00000109062 4036 0.794 0.794 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
66. ITGA8 ENSG00000077943 1889 0.793 0.793 - integrin subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:6144]
67. KRT8 ENSG00000170421 12050 0.793 0.793 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
68. SCUBE3 ENSG00000146197 4847 0.792 0.792 - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
69. ALDH1A2 ENSG00000128918 11780 0.792 0.792 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
70. CREB3L1 ENSG00000157613 755 0.791 0.791 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
71. TEAD3 ENSG00000007866 2898 0.791 0.791 - TEA domain transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11716]
72. S100A11 ENSG00000163191 11475 0.79 0.790 - S100 calcium binding protein A11 [Source:HGNC Symbol;Acc:HGNC:10488]
73. SFRP1 ENSG00000104332 280077 0.785 0.785 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
74. ADAMTS9 ENSG00000163638 2110 0.78 0.780 - ADAM metallopeptidase with thrombospondin type 1 motif 9 [Source:HGNC Symbol;Acc:HGNC:13202]
75. ENPEP ENSG00000138792 1005 0.78 0.780 - glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
76. SMAD6 ENSG00000137834 805 0.779 0.779 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
77. TRO ENSG00000067445 8412 0.778 0.778 - trophinin [Source:HGNC Symbol;Acc:HGNC:12326]
78. FOS ENSG00000170345 1363 0.777 0.777 - Fos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]
79. NFIA ENSG00000162599 3382 0.775 0.775 - nuclear factor I A [Source:HGNC Symbol;Acc:HGNC:7784]
80. TRABD2B ENSG00000269113 1426 0.774 0.774 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
81. IL13RA1 ENSG00000131724 1432 0.774 0.774 - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
82. TCF21 ENSG00000118526 1286 0.774 0.774 - transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]
83. DDX17 ENSG00000100201 59565 0.774 0.774 - DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
84. LAMA5 ENSG00000130702 4073 0.772 0.772 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
85. RNF207 ENSG00000158286 362 0.77 0.770 - ring finger protein 207 [Source:HGNC Symbol;Acc:HGNC:32947]
86. HSD17B14 ENSG00000087076 827 0.77 0.770 - hydroxysteroid 17-beta dehydrogenase 14 [Source:HGNC Symbol;Acc:HGNC:23238]
87. APOE ENSG00000130203 3263 0.769 0.769 - apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]
88. EMCN ENSG00000164035 2329 0.769 0.769 - endomucin [Source:HGNC Symbol;Acc:HGNC:16041]
89. BNC2 ENSG00000173068 7220 0.769 0.769 - basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]
90. TMCC3 ENSG00000057704 1309 0.768 0.768 - transmembrane and coiled-coil domain family 3 [Source:HGNC Symbol;Acc:HGNC:29199]
91. TMEM26 ENSG00000196932 357 0.766 0.766 - transmembrane protein 26 [Source:HGNC Symbol;Acc:HGNC:28550]
92. COL16A1 ENSG00000084636 391 0.766 0.766 - collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]
93. NPNT ENSG00000168743 749 0.765 0.765 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
94. ITM2B ENSG00000136156 52463 0.765 0.765 - integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
95. LOC729737 1555 0.764 0.764 - uncharacterized LOC729737
96. RSPO4 ENSG00000101282 381 0.764 0.764 - R-spondin 4 [Source:HGNC Symbol;Acc:HGNC:16175]
97. KRT18 ENSG00000111057 1738 0.764 0.764 - keratin 18 [Source:HGNC Symbol;Acc:HGNC:6430]
98. WASF2 ENSG00000158195 11361 0.764 0.764 - WAS protein family member 2 [Source:HGNC Symbol;Acc:HGNC:12733]
99. LINC00472 ENSG00000233237 690 0.762 0.762 - long intergenic non-protein coding RNA 472 [Source:HGNC Symbol;Acc:HGNC:21380]
100. HSPB1 ENSG00000106211 26988 0.762 0.762 - heat shock protein family B (small) member 1 [Source:HGNC Symbol;Acc:HGNC:5246]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA