Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NPC2

Gene Name Gene ID Reads Annotation
NPC2 ENSG00000119655 5889 NPC intracellular cholesterol transporter 2 [Source:HGNC Symbol;Acc:HGNC:14537]



Genes with expression patterns similar to NPC2

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. NPC2 ENSG00000119655 5889 2 1.000 1.000 NPC intracellular cholesterol transporter 2 [Source:HGNC Symbol;Acc:HGNC:14537]
2. SFRP1 ENSG00000104332 280077 1.605 0.817 0.788 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
3. AHNAK ENSG00000124942 11800 1.601 0.866 0.735 AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
4. SVEP1 ENSG00000165124 1854 1.515 0.808 0.707 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
5. ROR1 ENSG00000185483 9648 1.491 0.789 0.702 receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
6. GATA6-AS1 ENSG00000266010 839 1.478 0.775 0.703 GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
7. MYRF ENSG00000124920 5866 1.42 0.701 0.719 myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
8. KCTD12 ENSG00000178695 23035 0.885 0.885 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
9. KRT8 ENSG00000170421 12050 0.86 0.860 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
10. FREM2 ENSG00000150893 3376 0.858 0.858 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
11. HAND2 ENSG00000164107 5416 0.855 0.855 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
12. ALDH1A2 ENSG00000128918 11780 0.853 0.853 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
13. BMP4 ENSG00000125378 10639 0.853 0.853 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
14. PLAGL1 ENSG00000118495 6344 0.85 0.850 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
15. MYL9 ENSG00000101335 4604 0.845 0.845 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
16. DSP ENSG00000096696 5097 0.835 0.835 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
17. SERINC5 ENSG00000164300 3838 0.829 0.829 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
18. SLC9A3R1 ENSG00000109062 4036 0.824 0.824 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
19. ATP2B4 ENSG00000058668 5432 0.819 0.819 - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
20. KRT19 ENSG00000171345 1700 0.817 0.817 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
21. FRAS1 ENSG00000138759 3662 0.815 0.815 - Fraser extracellular matrix complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19185]
22. SPARC ENSG00000113140 39707 0.811 0.811 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
23. PAX8 ENSG00000125618 1203 0.809 0.809 - paired box 8 [Source:HGNC Symbol;Acc:HGNC:8622]
24. PHACTR2 ENSG00000112419 13720 0.801 0.801 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
25. KRT18 ENSG00000111057 1738 0.8 0.800 - keratin 18 [Source:HGNC Symbol;Acc:HGNC:6430]
26. TRANK1 ENSG00000168016 5941 0.797 0.797 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
27. COL1A1 ENSG00000108821 71290 0.795 0.795 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
28. GATA6 ENSG00000141448 3614 0.794 0.794 - GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
29. BAMBI ENSG00000095739 2641 0.794 0.794 - BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
30. SMAD6 ENSG00000137834 805 0.793 0.793 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
31. WT1 ENSG00000184937 5369 0.791 0.791 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
32. SPINT2 ENSG00000167642 25745 0.789 0.789 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
33. HIF3A ENSG00000124440 866 0.785 0.785 - hypoxia inducible factor 3 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15825]
34. IGFBP7 ENSG00000163453 5320 0.784 0.784 - insulin like growth factor binding protein 7 [Source:HGNC Symbol;Acc:HGNC:5476]
35. GPC3 ENSG00000147257 34465 0.783 0.783 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
36. COL1A2 ENSG00000164692 43340 0.781 0.781 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
37. COL6A1 ENSG00000142156 20649 0.781 0.781 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
38. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.781 0.781 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
39. COL6A2 ENSG00000142173 2550 0.78 0.780 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
40. GATA3 ENSG00000107485 2433 0.776 0.776 - GATA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:4172]
41. APOE ENSG00000130203 3263 0.776 0.776 - apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]
42. SYTL5 ENSG00000147041 256 0.775 0.775 - synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589]
43. CDH3 ENSG00000062038 5449 0.773 0.773 - cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]
44. ADRB3 ENSG00000188778 204 0.771 0.771 - adrenoceptor beta 3 [Source:HGNC Symbol;Acc:HGNC:288]
45. CEBPD ENSG00000221869 280 0.77 0.770 - CCAAT enhancer binding protein delta [Source:HGNC Symbol;Acc:HGNC:1835]
46. MIR503HG ENSG00000223749 600 0.769 0.769 - MIR503 host gene [Source:HGNC Symbol;Acc:HGNC:28258]
47. IFITM3 ENSG00000142089 57239 0.769 0.769 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
48. MMP11 ENSG00000099953, ENSG00000275365 2049 0.769 0.769 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
49. PEG3 ENSG00000198300 11207 0.767 0.767 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
50. PITX1 ENSG00000069011 817 0.766 0.766 - paired like homeodomain 1 [Source:HGNC Symbol;Acc:HGNC:9004]
51. SCUBE3 ENSG00000146197 4847 0.765 0.765 - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
52. ITGA3 ENSG00000005884 402 0.764 0.764 - integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]
53. ITM2B ENSG00000136156 52463 0.762 0.762 - integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
54. RFTN1 ENSG00000131378 3531 0.762 0.762 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
55. MKL2 18184 0.758 0.758 - MKL1/myocardin like 2, transcript variant X15
56. S100A11 ENSG00000163191 11475 0.758 0.758 - S100 calcium binding protein A11 [Source:HGNC Symbol;Acc:HGNC:10488]
57. GATA5 ENSG00000130700 1069 0.757 0.757 - GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
58. ANXA11 ENSG00000122359 3726 0.756 0.756 - annexin A11 [Source:HGNC Symbol;Acc:HGNC:535]
59. GRN ENSG00000030582 15538 0.754 0.754 - granulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]
60. CRISPLD2 ENSG00000103196 2911 0.754 0.754 - cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
61. NRXN3 ENSG00000021645 799 0.754 0.754 - neurexin 3 [Source:HGNC Symbol;Acc:HGNC:8010]
62. CLMN ENSG00000165959 1437 0.753 0.753 - calmin [Source:HGNC Symbol;Acc:HGNC:19972]
63. ST7 ENSG00000004866 2439 0.75 0.750 - suppression of tumorigenicity 7 [Source:HGNC Symbol;Acc:HGNC:11351]
64. PDE11A ENSG00000128655, ENSG00000284741 1225 0.75 0.750 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
65. PCDH17 ENSG00000118946 3309 0.75 0.750 - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
66. CDH9 ENSG00000113100 257 0.747 0.747 - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
67. COL5A1 ENSG00000130635 11942 0.746 0.746 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
68. DCDC2 ENSG00000146038 407 0.746 0.746 - doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
69. COL3A1 ENSG00000168542 140021 0.745 0.745 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
70. SLC44A2 ENSG00000129353 6871 0.745 0.745 - solute carrier family 44 member 2 [Source:HGNC Symbol;Acc:HGNC:17292]
71. TRABD2B ENSG00000269113 1426 0.742 0.742 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
72. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.742 0.742 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
73. GNG12 ENSG00000172380 3600 0.742 0.742 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
74. DMKN ENSG00000161249 3603 0.742 0.742 - dermokine [Source:HGNC Symbol;Acc:HGNC:25063]
75. POSTN ENSG00000133110 5228 0.74 0.740 - periostin [Source:HGNC Symbol;Acc:HGNC:16953]
76. ID2 ENSG00000115738 48412 0.74 0.740 - inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
77. TMCC3 ENSG00000057704 1309 0.74 0.740 - transmembrane and coiled-coil domain family 3 [Source:HGNC Symbol;Acc:HGNC:29199]
78. RBPMS ENSG00000157110 10094 0.737 0.737 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
79. NFIB ENSG00000147862 8306 0.735 0.735 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
80. PLAT ENSG00000104368 11877 0.732 - 0.732 plasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]
81. RAB11FIP1 ENSG00000156675 2188 0.732 0.732 - RAB11 family interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30265]
82. TMEM26 ENSG00000196932 357 0.731 0.731 - transmembrane protein 26 [Source:HGNC Symbol;Acc:HGNC:28550]
83. TBX5 ENSG00000089225 1012 0.731 0.731 - T-box 5 [Source:HGNC Symbol;Acc:HGNC:11604]
84. LAMA5 ENSG00000130702 4073 0.729 0.729 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
85. HOGA1 ENSG00000241935 221 0.728 0.728 - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
86. CKAP4 ENSG00000136026 9372 0.728 0.728 - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
87. CDKN1C ENSG00000129757, ENSG00000273707 21622 0.728 0.728 - cyclin dependent kinase inhibitor 1C [Source:HGNC Symbol;Acc:HGNC:1786]
88. ELF4 ENSG00000102034 647 0.728 0.728 - E74 like ETS transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:3319]
89. HYMAI ENSG00000283122 757 0.728 0.728 - hydatidiform mole associated and imprinted [Source:HGNC Symbol;Acc:HGNC:5326]
90. PDGFRB ENSG00000113721 2455 0.727 0.727 - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
91. KHNYN ENSG00000100441 2595 0.726 0.726 - KH and NYN domain containing [Source:HGNC Symbol;Acc:HGNC:20166]
92. BST2 ENSG00000130303 1588 0.726 0.726 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
93. CREB3L1 ENSG00000157613 755 0.725 0.725 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
94. MAGI2-AS3 ENSG00000234456 5066 0.725 0.725 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
95. CSRP1 ENSG00000159176 5731 0.724 0.724 - cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
96. GUCY1B3 1302 0.723 0.723 - guanylate cyclase 1, soluble, beta 3, transcript variant X5
97. HAND2-AS1 ENSG00000237125 218 0.722 0.722 - HAND2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48872]
98. PARD6B ENSG00000124171 972 0.722 0.722 - par-6 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:16245]
99. ENPEP ENSG00000138792 1005 0.72 0.720 - glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
100. CNTN4 ENSG00000144619 2198 0.719 0.719 - contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]

There are 30 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA