Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APOBEC3C

Gene Name Gene ID Reads Annotation
APOBEC3C ENSG00000244509 3066 apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]



Genes with expression patterns similar to APOBEC3C

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. APOBEC3C ENSG00000244509 3066 2 1.000 1.000 apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
2. SPARC ENSG00000113140 39707 1.624 0.920 0.704 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
3. GPC3 ENSG00000147257 34465 1.585 0.864 0.721 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
4. TIMP1 ENSG00000102265 19585 1.583 0.759 0.824 TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
5. RFTN1 ENSG00000131378 3531 1.581 0.853 0.728 raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
6. COL1A1 ENSG00000108821 71290 0.915 0.915 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
7. HAND2 ENSG00000164107 5416 0.898 0.898 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
8. PEG3 ENSG00000198300 11207 0.889 0.889 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
9. ROR1 ENSG00000185483 9648 0.877 0.877 - receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
10. COL3A1 ENSG00000168542 140021 0.872 0.872 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
11. COL6A2 ENSG00000142173 2550 0.872 0.872 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
12. SFRP1 ENSG00000104332 280077 0.868 0.868 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
13. AHNAK ENSG00000124942 11800 0.858 0.858 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
14. COL1A2 ENSG00000164692 43340 0.857 0.857 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
15. NRK ENSG00000123572 4309 0.857 0.857 - Nik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]
16. MYRF ENSG00000124920 5866 0.856 0.856 - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
17. CNTN4 ENSG00000144619 2198 0.853 0.853 - contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
18. MYL9 ENSG00000101335 4604 0.849 0.849 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
19. KRT8 ENSG00000170421 12050 0.846 0.846 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
20. CCDC3 ENSG00000151468 3108 0.845 0.845 - coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
21. GNG12 ENSG00000172380 3600 0.841 0.841 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
22. TMEM26 ENSG00000196932 357 0.841 0.841 - transmembrane protein 26 [Source:HGNC Symbol;Acc:HGNC:28550]
23. BST2 ENSG00000130303 1588 0.837 0.837 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
24. TRANK1 ENSG00000168016 5941 0.837 0.837 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
25. GATA5 ENSG00000130700 1069 0.834 0.834 - GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
26. WT1 ENSG00000184937 5369 0.831 0.831 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
27. MATN2 ENSG00000132561 968 0.83 0.830 - matrilin 2 [Source:HGNC Symbol;Acc:HGNC:6908]
28. ALDH1A2 ENSG00000128918 11780 0.83 0.830 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
29. BMP4 ENSG00000125378 10639 0.829 0.829 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
30. KRT19 ENSG00000171345 1700 0.828 0.828 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
31. CREB3L1 ENSG00000157613 755 0.828 0.828 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
32. TCF21 ENSG00000118526 1286 0.827 0.827 - transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]
33. RBPMS ENSG00000157110 10094 0.826 0.826 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
34. SERINC5 ENSG00000164300 3838 0.826 0.826 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
35. IGFBP3 ENSG00000146674 2312 0.822 0.822 - insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]
36. PLAGL1 ENSG00000118495 6344 0.822 0.822 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
37. ATP2B4 ENSG00000058668 5432 0.819 0.819 - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
38. BAMBI ENSG00000095739 2641 0.818 0.818 - BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
39. GATA6 ENSG00000141448 3614 0.818 0.818 - GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
40. KRT18 ENSG00000111057 1738 0.817 0.817 - keratin 18 [Source:HGNC Symbol;Acc:HGNC:6430]
41. DSP ENSG00000096696 5097 0.815 0.815 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
42. SHISA3 ENSG00000178343 7060 0.81 0.810 - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
43. COL5A1 ENSG00000130635 11942 0.81 0.810 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
44. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.809 0.809 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
45. KCTD12 ENSG00000178695 23035 0.809 0.809 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
46. PODXL ENSG00000128567 4375 0.809 0.809 - podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]
47. GATA6-AS1 ENSG00000266010 839 0.809 0.809 - GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
48. RUNX1T1 ENSG00000079102 8612 0.807 0.807 - RUNX1 translocation partner 1 [Source:HGNC Symbol;Acc:HGNC:1535]
49. FREM2 ENSG00000150893 3376 0.805 0.805 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
50. PVRL2 PVRL2 2781 0.802 0.802 -
51. RHOBTB3 ENSG00000164292 20064 0.802 0.802 - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
52. PNKD ENSG00000127838 3640 0.801 0.801 - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
53. PDE11A ENSG00000128655, ENSG00000284741 1225 0.801 0.801 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
54. DLK1 ENSG00000185559 70813 0.801 0.801 - delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
55. CDKN1C ENSG00000129757, ENSG00000273707 21622 0.798 0.798 - cyclin dependent kinase inhibitor 1C [Source:HGNC Symbol;Acc:HGNC:1786]
56. GUCY1A3 1501 0.797 0.797 - guanylate cyclase 1, soluble, alpha 3, transcript variant X7
57. DCN ENSG00000011465 12980 0.797 0.797 - decorin [Source:HGNC Symbol;Acc:HGNC:2705]
58. NFIB ENSG00000147862 8306 0.796 0.796 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
59. CSRP1 ENSG00000159176 5731 0.793 0.793 - cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
60. GOLGA8B ENSG00000215252 2149 0.79 0.790 - golgin A8 family member B [Source:HGNC Symbol;Acc:HGNC:31973]
61. C1orf53 ENSG00000203724 485 0.788 0.788 - chromosome 1 open reading frame 53 [Source:HGNC Symbol;Acc:HGNC:30003]
62. PRSS35 ENSG00000146250 558 0.786 0.786 - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
63. DSG2 ENSG00000046604 4179 0.784 0.784 - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
64. SLC9A3R1 ENSG00000109062 4036 0.783 0.783 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
65. PDE3A ENSG00000172572 3123 0.783 0.783 - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
66. TRABD2B ENSG00000269113 1426 0.78 0.780 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
67. BISPR ENSG00000282851 443 0.779 0.779 - BST2 interferon stimulated positive regulator [Source:HGNC Symbol;Acc:HGNC:51290]
68. TSHZ2 ENSG00000182463 10473 0.778 0.778 - teashirt zinc finger homeobox 2 [Source:HGNC Symbol;Acc:HGNC:13010]
69. CAMK2A ENSG00000070808 150 0.778 0.778 - calcium/calmodulin dependent protein kinase II alpha [Source:HGNC Symbol;Acc:HGNC:1460]
70. HAND1 ENSG00000113196 3661 0.776 0.776 - heart and neural crest derivatives expressed 1 [Source:HGNC Symbol;Acc:HGNC:4807]
71. IL6ST ENSG00000134352 9416 0.774 0.774 - interleukin 6 signal transducer [Source:HGNC Symbol;Acc:HGNC:6021]
72. S100A10 ENSG00000197747 2505 0.774 0.774 - S100 calcium binding protein A10 [Source:HGNC Symbol;Acc:HGNC:10487]
73. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.774 0.774 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
74. LAMA5 ENSG00000130702 4073 0.774 0.774 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
75. CD151 ENSG00000177697 7219 0.772 0.772 - CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]
76. MEG3 ENSG00000214548 19404 0.772 0.772 - maternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:14575]
77. IFITM3 ENSG00000142089 57239 0.771 0.771 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
78. GSE1 ENSG00000131149 4676 0.768 0.768 - Gse1 coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:28979]
79. CYTL1 ENSG00000170891 869 0.768 0.768 - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
80. CKAP4 ENSG00000136026 9372 0.768 0.768 - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
81. AP1G2 ENSG00000213983 1379 0.767 0.767 - adaptor related protein complex 1 subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:556]
82. TWIST2 ENSG00000233608 3167 0.765 0.765 - twist family bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:20670]
83. HLX ENSG00000136630 2104 0.764 0.764 - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
84. IL13RA1 ENSG00000131724 1432 0.762 0.762 - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
85. SYTL5 ENSG00000147041 256 0.762 0.762 - synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589]
86. FOS ENSG00000170345 1363 0.762 0.762 - Fos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]
87. SGCG ENSG00000102683 246 0.761 0.761 - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
88. TNNT2 ENSG00000118194 984 0.759 0.759 - troponin T2, cardiac type [Source:HGNC Symbol;Acc:HGNC:11949]
89. TMEM245 ENSG00000106771 6332 0.759 0.759 - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
90. SVEP1 ENSG00000165124 1854 0.758 0.758 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
91. MAGI2-AS3 ENSG00000234456 5066 0.758 0.758 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
92. TNNI1 ENSG00000159173 9853 0.758 0.758 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
93. TRPM5 ENSG00000070985 137 0.758 0.758 - transient receptor potential cation channel subfamily M member 5 [Source:HGNC Symbol;Acc:HGNC:14323]
94. NPNT ENSG00000168743 749 0.758 0.758 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
95. PHACTR2 ENSG00000112419 13720 0.756 0.756 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
96. RNF207 ENSG00000158286 362 0.756 0.756 - ring finger protein 207 [Source:HGNC Symbol;Acc:HGNC:32947]
97. COL6A1 ENSG00000142156 20649 0.755 0.755 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
98. IRF2BPL ENSG00000119669 4042 0.755 0.755 - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
99. GRN ENSG00000030582 15538 0.753 0.753 - granulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]
100. MYH9 ENSG00000100345 12447 0.752 0.752 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]

There are 75 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA