Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Human data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCDC3

Gene Name Gene ID Reads Annotation
CCDC3 ENSG00000151468 3108 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]



Genes with expression patterns similar to CCDC3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. CCDC3 ENSG00000151468 3108 2 1.000 1.000 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
2. IGFBP3 ENSG00000146674 2312 1.814 0.946 0.868 insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]
3. BST2 ENSG00000130303 1588 1.768 0.939 0.829 bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
4. SFRP1 ENSG00000104332 280077 1.722 0.936 0.786 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. GATA6-AS1 ENSG00000266010 839 1.705 0.900 0.805 GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
6. MATN2 ENSG00000132561 968 1.683 0.897 0.786 matrilin 2 [Source:HGNC Symbol;Acc:HGNC:6908]
7. SHISA3 ENSG00000178343 7060 1.673 0.936 0.737 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
8. GATA6 ENSG00000141448 3614 1.671 0.910 0.761 GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
9. BAMBI ENSG00000095739 2641 1.668 0.896 0.772 BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
10. UNC5C ENSG00000182168 3176 1.664 0.839 0.825 unc-5 netrin receptor C [Source:HGNC Symbol;Acc:HGNC:12569]
11. HLX ENSG00000136630 2104 1.646 0.877 0.769 H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
12. GATA5 ENSG00000130700 1069 1.635 0.875 0.760 GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
13. MEG3 ENSG00000214548 19404 1.629 0.858 0.771 maternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:14575]
14. TRANK1 ENSG00000168016 5941 1.591 0.820 0.771 tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
15. RFTN1 ENSG00000131378 3531 1.584 0.821 0.763 raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
16. CTSB ENSG00000164733 7440 1.551 0.733 0.818 cathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]
17. GATA4 ENSG00000136574, ENSG00000285109 1185 1.544 0.778 0.766 GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173]
18. MYRF ENSG00000124920 5866 1.543 0.829 0.714 myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
19. PLAT ENSG00000104368 11877 1.527 0.767 0.760 plasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]
20. BEND4 ENSG00000188848 506 1.518 0.763 0.755 BEN domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23815]
21. DSP ENSG00000096696 5097 1.51 0.806 0.704 desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
22. DPF3 ENSG00000205683 672 1.507 0.795 0.712 double PHD fingers 3 [Source:HGNC Symbol;Acc:HGNC:17427]
23. GRIA4 ENSG00000152578 1876 1.502 0.768 0.734 glutamate ionotropic receptor AMPA type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4574]
24. DLK1 ENSG00000185559 70813 0.953 0.953 - delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
25. GUCY1A3 1501 0.95 0.950 - guanylate cyclase 1, soluble, alpha 3, transcript variant X7
26. PODXL ENSG00000128567 4375 0.936 0.936 - podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]
27. TCF21 ENSG00000118526 1286 0.93 0.930 - transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]
28. COL6A2 ENSG00000142173 2550 0.896 0.896 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
29. HAND1 ENSG00000113196 3661 0.892 0.892 - heart and neural crest derivatives expressed 1 [Source:HGNC Symbol;Acc:HGNC:4807]
30. SLC48A1 ENSG00000211584 2891 0.89 0.890 - solute carrier family 48 member 1 [Source:HGNC Symbol;Acc:HGNC:26035]
31. NRK ENSG00000123572 4309 0.887 0.887 - Nik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]
32. HAND2 ENSG00000164107 5416 0.885 0.885 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
33. COL1A1 ENSG00000108821 71290 0.882 0.882 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
34. FAM65A 3785 0.881 0.881 - family with sequence similarity 65 member A, transcript variant X7
35. SPARC ENSG00000113140 39707 0.873 0.873 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
36. SERINC5 ENSG00000164300 3838 0.872 0.872 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
37. LAMA5 ENSG00000130702 4073 0.871 0.871 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
38. NPHS2 ENSG00000116218 6339 0.87 0.870 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
39. NPNT ENSG00000168743 749 0.87 0.870 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
40. FREM2 ENSG00000150893 3376 0.861 0.861 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
41. TARID ENSG00000227954 125 0.859 0.859 - TCF21 antisense RNA inducing promoter demethylation [Source:HGNC Symbol;Acc:HGNC:50506]
42. CLIC5 ENSG00000112782 1596 0.857 0.857 - chloride intracellular channel 5 [Source:HGNC Symbol;Acc:HGNC:13517]
43. AHNAK ENSG00000124942 11800 0.849 0.849 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
44. SBSPON ENSG00000164764 263 0.849 0.849 - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
45. PDE3A ENSG00000172572 3123 0.849 0.849 - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
46. PEG3 ENSG00000198300 11207 0.848 0.848 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
47. PLAGL1 ENSG00000118495 6344 0.848 0.848 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
48. NPHS1 ENSG00000161270 1427 0.847 0.847 - NPHS1, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]
49. SGCG ENSG00000102683 246 0.846 0.846 - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
50. APOBEC3C ENSG00000244509 3066 0.845 0.845 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
51. MPP5 ENSG00000072415 2853 0.843 0.843 - membrane palmitoylated protein 5 [Source:HGNC Symbol;Acc:HGNC:18669]
52. COL3A1 ENSG00000168542 140021 0.842 0.842 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
53. PNKD ENSG00000127838 3640 0.841 0.841 - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
54. ANXA2 ENSG00000182718 24280 0.841 0.841 - annexin A2 [Source:HGNC Symbol;Acc:HGNC:537]
55. CD151 ENSG00000177697 7219 0.841 0.841 - CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]
56. PLAC1 ENSG00000170965 302 0.84 0.840 - placenta specific 1 [Source:HGNC Symbol;Acc:HGNC:9044]
57. SPOCK2 ENSG00000107742 3481 0.837 0.837 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:13564]
58. MAGI2-AS3 ENSG00000234456 5066 0.835 0.835 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
59. TGFBR3 ENSG00000069702 8468 0.834 0.834 - transforming growth factor beta receptor 3 [Source:HGNC Symbol;Acc:HGNC:11774]
60. ZNF541 ENSG00000118156 137 0.833 0.833 - zinc finger protein 541 [Source:HGNC Symbol;Acc:HGNC:25294]
61. ST6GALNAC3 ENSG00000184005 9379 0.831 0.831 - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
62. AQP3 ENSG00000165272 137 0.831 0.831 - aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
63. SOST ENSG00000167941 830 0.831 0.831 - sclerostin [Source:HGNC Symbol;Acc:HGNC:13771]
64. CREB3L1 ENSG00000157613 755 0.827 0.827 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
65. SYTL1 ENSG00000142765 333 0.825 0.825 - synaptotagmin like 1 [Source:HGNC Symbol;Acc:HGNC:15584]
66. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.824 0.824 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
67. PTH1R ENSG00000160801 379 0.824 0.824 - parathyroid hormone 1 receptor [Source:HGNC Symbol;Acc:HGNC:9608]
68. MAFB ENSG00000204103 4840 0.823 0.823 - MAF bZIP transcription factor B [Source:HGNC Symbol;Acc:HGNC:6408]
69. DCN ENSG00000011465 12980 0.82 0.820 - decorin [Source:HGNC Symbol;Acc:HGNC:2705]
70. DSG2 ENSG00000046604 4179 0.82 0.820 - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
71. MGARP ENSG00000137463 987 0.819 - 0.819 mitochondria localized glutamic acid rich protein [Source:HGNC Symbol;Acc:HGNC:29969]
72. CTGF ENSG00000118523 4166 0.819 0.819 - connective tissue growth factor [Source:HGNC Symbol;Acc:HGNC:2500]
73. S1PR5 ENSG00000180739 274 0.817 - 0.817 sphingosine-1-phosphate receptor 5 [Source:HGNC Symbol;Acc:HGNC:14299]
74. WNT2 ENSG00000105989 364 0.816 0.816 - Wnt family member 2 [Source:HGNC Symbol;Acc:HGNC:12780]
75. IL6ST ENSG00000134352 9416 0.814 0.814 - interleukin 6 signal transducer [Source:HGNC Symbol;Acc:HGNC:6021]
76. PTPRO ENSG00000151490 826 0.811 0.811 - protein tyrosine phosphatase, receptor type O [Source:HGNC Symbol;Acc:HGNC:9678]
77. MYL9 ENSG00000101335 4604 0.809 0.809 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
78. KRT19 ENSG00000171345 1700 0.808 0.808 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
79. ENPEP ENSG00000138792 1005 0.808 0.808 - glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
80. JUN ENSG00000177606 10036 0.808 - 0.808 Jun proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:6204]
81. SERPIND1 ENSG00000099937 203 0.807 0.807 - serpin family D member 1 [Source:HGNC Symbol;Acc:HGNC:4838]
82. GPC3 ENSG00000147257 34465 0.806 0.806 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
83. TRABD2B ENSG00000269113 1426 0.806 0.806 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
84. ROR1 ENSG00000185483 9648 0.806 0.806 - receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
85. GADD45A ENSG00000116717 1743 0.804 0.804 - growth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]
86. COL1A2 ENSG00000164692 43340 0.804 0.804 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
87. S100A10 ENSG00000197747 2505 0.804 0.804 - S100 calcium binding protein A10 [Source:HGNC Symbol;Acc:HGNC:10487]
88. ALPK2 ENSG00000198796 503 0.802 0.802 - alpha kinase 2 [Source:HGNC Symbol;Acc:HGNC:20565]
89. STAR ENSG00000147465 443 0.802 0.802 - steroidogenic acute regulatory protein [Source:HGNC Symbol;Acc:HGNC:11359]
90. Mar-03 Mar-03 619 0.8 - 0.800
91. LEFTY1 ENSG00000243709 302 0.8 0.800 - left-right determination factor 1 [Source:HGNC Symbol;Acc:HGNC:6552]
92. KLK6 ENSG00000167755 1069 0.798 0.798 - kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]
93. LGALS3BP ENSG00000108679 893 0.795 0.795 - galectin 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6564]
94. ITGA3 ENSG00000005884 402 0.795 0.795 - integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]
95. SYTL5 ENSG00000147041 256 0.795 0.795 - synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589]
96. FAM134B 365 0.795 0.795 - family with sequence similarity 134 member B, transcript variant X3
97. NEBL ENSG00000078114 534 0.794 0.794 - nebulette [Source:HGNC Symbol;Acc:HGNC:16932]
98. C1orf53 ENSG00000203724 485 0.793 0.793 - chromosome 1 open reading frame 53 [Source:HGNC Symbol;Acc:HGNC:30003]
99. SMAD6 ENSG00000137834 805 0.792 0.792 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
100. NFATC2 ENSG00000101096 898 0.791 0.791 - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]

There are 109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA