Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Human data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COL6A1

Gene Name Gene ID Reads Annotation
COL6A1 ENSG00000142156 20649 collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]



Genes with expression patterns similar to COL6A1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. COL6A1 ENSG00000142156 20649 2 1.000 1.000 collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
2. COL1A2 ENSG00000164692 43340 0.885 0.885 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
3. AHNAK ENSG00000124942 11800 0.882 0.882 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
4. COL1A1 ENSG00000108821 71290 0.881 0.881 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
5. RBPMS ENSG00000157110 10094 0.878 0.878 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
6. KCTD12 ENSG00000178695 23035 0.877 0.877 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
7. SVEP1 ENSG00000165124 1854 0.873 0.873 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
8. SPARC ENSG00000113140 39707 0.872 0.872 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
9. HAND2 ENSG00000164107 5416 0.869 0.869 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
10. SFRP1 ENSG00000104332 280077 0.866 0.866 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
11. MYL9 ENSG00000101335 4604 0.861 0.861 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
12. GATA6 ENSG00000141448 3614 0.861 0.861 - GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
13. IFITM3 ENSG00000142089 57239 0.861 0.861 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
14. FREM2 ENSG00000150893 3376 0.859 0.859 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
15. GPC3 ENSG00000147257 34465 0.859 0.859 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
16. COL6A2 ENSG00000142173 2550 0.857 0.857 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
17. KRT19 ENSG00000171345 1700 0.852 0.852 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
18. MMP11 ENSG00000099953, ENSG00000275365 2049 0.849 0.849 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
19. GATA6-AS1 ENSG00000266010 839 0.849 0.849 - GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
20. BAMBI ENSG00000095739 2641 0.848 0.848 - BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
21. PLAGL1 ENSG00000118495 6344 0.847 0.847 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
22. COL5A1 ENSG00000130635 11942 0.846 0.846 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
23. PHACTR2 ENSG00000112419 13720 0.844 0.844 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
24. COL3A1 ENSG00000168542 140021 0.842 0.842 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
25. KRT8 ENSG00000170421 12050 0.837 0.837 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
26. PEG3 ENSG00000198300 11207 0.834 0.834 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
27. DSP ENSG00000096696 5097 0.832 0.832 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
28. SERINC5 ENSG00000164300 3838 0.832 0.832 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
29. SPINT2 ENSG00000167642 25745 0.831 0.831 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
30. SLC9A3R1 ENSG00000109062 4036 0.83 0.830 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
31. PVRL2 PVRL2 2781 0.826 0.826 -
32. TRABD2B ENSG00000269113 1426 0.822 0.822 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
33. MYH9 ENSG00000100345 12447 0.818 0.818 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]
34. PDE3A ENSG00000172572 3123 0.815 0.815 - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
35. GATA5 ENSG00000130700 1069 0.813 0.813 - GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
36. RSPO4 ENSG00000101282 381 0.812 0.812 - R-spondin 4 [Source:HGNC Symbol;Acc:HGNC:16175]
37. MIR503HG ENSG00000223749 600 0.812 0.812 - MIR503 host gene [Source:HGNC Symbol;Acc:HGNC:28258]
38. LAMA5 ENSG00000130702 4073 0.811 0.811 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
39. GRN ENSG00000030582 15538 0.81 0.810 - granulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]
40. RFTN1 ENSG00000131378 3531 0.807 0.807 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
41. DSC1 ENSG00000134765 444 0.805 0.805 - desmocollin 1 [Source:HGNC Symbol;Acc:HGNC:3035]
42. GNG12 ENSG00000172380 3600 0.804 0.804 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
43. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.803 0.803 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
44. TIMP1 ENSG00000102265 19585 0.803 0.803 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
45. WT1 ENSG00000184937 5369 0.803 0.803 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
46. ORAI3 ENSG00000175938 736 0.801 0.801 - ORAI calcium release-activated calcium modulator 3 [Source:HGNC Symbol;Acc:HGNC:28185]
47. SCUBE3 ENSG00000146197 4847 0.801 0.801 - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
48. PODXL ENSG00000128567 4375 0.8 0.800 - podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]
49. CREB3L1 ENSG00000157613 755 0.799 0.799 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
50. BMP4 ENSG00000125378 10639 0.799 0.799 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
51. TRANK1 ENSG00000168016 5941 0.799 0.799 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
52. SHISA3 ENSG00000178343 7060 0.798 0.798 - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
53. CD151 ENSG00000177697 7219 0.796 0.796 - CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]
54. DMKN ENSG00000161249 3603 0.793 0.793 - dermokine [Source:HGNC Symbol;Acc:HGNC:25063]
55. MAGI2-AS3 ENSG00000234456 5066 0.792 0.792 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
56. ROR1 ENSG00000185483 9648 0.791 0.791 - receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
57. BST2 ENSG00000130303 1588 0.79 0.790 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
58. ITM2B ENSG00000136156 52463 0.789 0.789 - integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
59. SOX6 ENSG00000110693 4046 0.786 0.786 - SRY-box 6 [Source:HGNC Symbol;Acc:HGNC:16421]
60. CNTN4 ENSG00000144619 2198 0.786 0.786 - contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
61. SMAD6 ENSG00000137834 805 0.783 0.783 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
62. SYTL5 ENSG00000147041 256 0.783 0.783 - synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589]
63. NPNT ENSG00000168743 749 0.782 0.782 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
64. NPC2 ENSG00000119655 5889 0.781 0.781 - NPC intracellular cholesterol transporter 2 [Source:HGNC Symbol;Acc:HGNC:14537]
65. PAX8 ENSG00000125618 1203 0.778 0.778 - paired box 8 [Source:HGNC Symbol;Acc:HGNC:8622]
66. PDE11A ENSG00000128655, ENSG00000284741 1225 0.778 0.778 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
67. CCDC3 ENSG00000151468 3108 0.776 0.776 - coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
68. ITM2C ENSG00000135916 51525 0.776 0.776 - integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
69. CDH3 ENSG00000062038 5449 0.775 0.775 - cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]
70. TCF21 ENSG00000118526 1286 0.774 0.774 - transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]
71. DUSP9 ENSG00000130829 1439 0.774 0.774 - dual specificity phosphatase 9 [Source:HGNC Symbol;Acc:HGNC:3076]
72. CDH9 ENSG00000113100 257 0.774 0.774 - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
73. GATA3 ENSG00000107485 2433 0.774 0.774 - GATA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:4172]
74. MYRF ENSG00000124920 5866 0.774 0.774 - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
75. POSTN ENSG00000133110 5228 0.773 0.773 - periostin [Source:HGNC Symbol;Acc:HGNC:16953]
76. ITGA3 ENSG00000005884 402 0.772 0.772 - integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]
77. ENPEP ENSG00000138792 1005 0.771 0.771 - glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
78. NRK ENSG00000123572 4309 0.77 0.770 - Nik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]
79. GUCY1B3 1302 0.769 0.769 - guanylate cyclase 1, soluble, beta 3, transcript variant X5
80. RNF207 ENSG00000158286 362 0.769 0.769 - ring finger protein 207 [Source:HGNC Symbol;Acc:HGNC:32947]
81. GUCY1A3 1501 0.768 0.768 - guanylate cyclase 1, soluble, alpha 3, transcript variant X7
82. APOE ENSG00000130203 3263 0.768 0.768 - apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]
83. NFIB ENSG00000147862 8306 0.767 0.767 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
84. PITX1 ENSG00000069011 817 0.766 0.766 - paired like homeodomain 1 [Source:HGNC Symbol;Acc:HGNC:9004]
85. ALDH1A2 ENSG00000128918 11780 0.766 0.766 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
86. CD74 ENSG00000019582 1778 0.765 0.765 - CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]
87. CFH ENSG00000000971 343 0.765 0.765 - complement factor H [Source:HGNC Symbol;Acc:HGNC:4883]
88. IGFBP3 ENSG00000146674 2312 0.763 0.763 - insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]
89. CACNB2 ENSG00000165995 488 0.762 0.762 - calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
90. IGFBP7 ENSG00000163453 5320 0.762 0.762 - insulin like growth factor binding protein 7 [Source:HGNC Symbol;Acc:HGNC:5476]
91. ASPG ENSG00000166183 184 0.762 0.762 - asparaginase [Source:HGNC Symbol;Acc:HGNC:20123]
92. PLAC1 ENSG00000170965 302 0.761 0.761 - placenta specific 1 [Source:HGNC Symbol;Acc:HGNC:9044]
93. UNC5B ENSG00000107731 3573 0.76 0.760 - unc-5 netrin receptor B [Source:HGNC Symbol;Acc:HGNC:12568]
94. CKAP4 ENSG00000136026 9372 0.759 0.759 - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
95. ANXA2 ENSG00000182718 24280 0.759 0.759 - annexin A2 [Source:HGNC Symbol;Acc:HGNC:537]
96. DCN ENSG00000011465 12980 0.759 0.759 - decorin [Source:HGNC Symbol;Acc:HGNC:2705]
97. MPP5 ENSG00000072415 2853 0.757 0.757 - membrane palmitoylated protein 5 [Source:HGNC Symbol;Acc:HGNC:18669]
98. ITGA8 ENSG00000077943 1889 0.757 0.757 - integrin subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:6144]
99. RAB11FIP1 ENSG00000156675 2188 0.756 0.756 - RAB11 family interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30265]
100. APOBEC3C ENSG00000244509 3066 0.755 0.755 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]

There are 91 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA