Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_posterior_slice_1, section s10.

Sample reads: 124,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4696.84 37805.41
2. MT-ATP6 MT-ATP6 2492.12 20059.37
3. EEF1A EEF1A 1335.07 10746.13
4. MT-ND5 MT-ND5 1314.05 10576.94
5. MT-CYB MT-CYB 1047.04 8427.75
6. MT-CO1 MT-CO1 913.53 7353.11
7. MT-ND4 MT-ND4 907.35 7303.37
8. ENSGALG00000018384 ENSGALG00000018384 827.62 6661.61
9. RPS3A ENSGALG00000010077 812.78 6542.16 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
10. RPL35A ENSGALG00000007611, ENSGALG00000041230 748.50 6024.76 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
11. gga-mir-3533 ENSGALG00000027736 725.02 5835.77 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. TMSB4X ENSGALG00000026383 697.20 5611.84 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
13. RPLP0 ENSGALG00000023294 664.44 5348.16 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
14. RPS10 ENSGALG00000002813 663.82 5343.16 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
15. RPL4 ENSGALG00000007711 638.48 5139.20 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
16. RPLP1 ENSGALG00000030878 613.76 4940.23 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
17. GAPDH ENSGALG00000014442 568.02 4572.06 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
18. RPS23 ENSGALG00000015617 513.63 4134.27 ribosomal protein S23
19. RPS8 ENSGALG00000010124 512.39 4124.29 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
20. gga-mir-3527 gga-mir-3527 462.33 3721.35
21. RPL8 ENSGALG00000016232 449.35 3616.87 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
22. RPL15 ENSGALG00000011290 445.64 3587.01 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
23. TXN ENSGALG00000015704 433.28 3487.52 thioredoxin [Source:NCBI gene;Acc:396437]
24. MT-ND1 MT-ND1 391.25 3149.22
25. RPS4 RPS4 390.01 3139.24
26. RPL7A ENSGALG00000003197 363.43 2925.29 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. SNRPD1 ENSGALG00000041334 357.25 2875.55 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
28. RPS28 ENSGALG00000024398 352.93 2840.77 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
29. RPL23A ENSGALG00000003966 350.45 2820.81 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
30. RPL19 ENSGALG00000001658 346.75 2791.03 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
31. RPL27 ENSGALG00000002837 345.51 2781.05 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
32. STMN1 ENSGALG00000001475 339.33 2731.31 stathmin 1 [Source:NCBI gene;Acc:396057]
33. CIRBP ENSGALG00000030918 334.38 2691.46 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
34. RPL27A ENSGALG00000005948 331.29 2666.59 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
35. HMGN2 HMGN2 328.20 2641.72
36. MARCKSL1 ENSGALG00000032335 326.97 2631.82 MARCKS like 1 [Source:NCBI gene;Acc:770764]
37. RPS12 ENSGALG00000013990 323.26 2601.96 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
38. PHB2 ENSGALG00000014567 321.40 2586.99 prohibitin 2 [Source:NCBI gene;Acc:771124]
39. PPIA ENSGALG00000028600 317.70 2557.20 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
40. HMGB2 ENSGALG00000010745 316.46 2547.22 high mobility group box 2 [Source:NCBI gene;Acc:396482]
41. RPSA 309.66 2492.49 ribosomal protein SA
42. RPS29 ENSGALG00000012229 309.04 2487.50 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
43. RPS6 ENSGALG00000015082 304.10 2447.74 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
44. ANP32B ENSGALG00000037483 301.01 2422.86 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
45. RPL26 RPL26 301.01 2422.86
46. RPLP2 ENSGALG00000034811 297.30 2393.00 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
47. HSPA8 ENSGALG00000006512 296.06 2383.02 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
48. RPL6 ENSGALG00000004818 296.06 2383.02 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
49. RPL32 ENSGALG00000027142 291.12 2343.26 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
50. AKAP12 ENSGALG00000036240 287.41 2313.40 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
51. ENO1 ENSGALG00000002377 287.41 2313.40 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
52. RAN ENSGALG00000002569 283.70 2283.53 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
53. RPS21 ENSGALG00000005338 279.99 2253.67 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
54. HMGN5 ENSGALG00000007131 273.19 2198.94 high mobility group nucleosome binding domain 5, transcript variant X1
55. RPS11 ENSGALG00000017299 273.19 2198.94 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
56. UBB ENSGALG00000004509 273.19 2198.94 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
57. RPS2 ENSGALG00000005490 271.34 2184.05 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
58. MT-ND6 MT-ND6 268.87 2164.17
59. RPL13 ENSGALG00000006179 267.63 2154.19 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
60. RPS15 ENSGALG00000015195 267.01 2149.19 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
61. RPL21 ENSGALG00000027035 266.40 2144.28 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
62. RPS7 ENSGALG00000016392 257.12 2069.59 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
63. RPS15A ENSGALG00000006771 254.65 2049.71 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
64. RPL18A 252.18 2029.83 ribosomal protein L18a
65. ENSGALG00000002696 ENSGALG00000002696 249.71 2009.95
66. GDI2 ENSGALG00000008169 238.58 1920.36 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
67. RPL5 ENSGALG00000005922 237.35 1910.46 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
68. BLMH ENSGALG00000004259 236.11 1900.48 bleomycin hydrolase [Source:NCBI gene;Acc:395996]
69. MDK ENSGALG00000008367 236.11 1900.48 midkine [Source:NCBI gene;Acc:423196]
70. RPL29 ENSGALG00000026978 232.40 1870.61 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
71. RPL36AL ENSGALG00000004952 230.55 1855.72 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
72. RPL12 ENSGALG00000008806 228.69 1840.75 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
73. RPL38 ENSGALG00000001465 224.37 1805.98 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
74. HSP90B1 ENSGALG00000033789 223.75 1800.99 heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
75. MT-ND3 MT-ND3 223.75 1800.99
76. ENSGALG00000028649 ENSGALG00000028649 221.89 1786.02
77. RPS13 ENSGALG00000006096 221.89 1786.02 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
78. RPL14 ENSGALG00000043379 220.04 1771.13 ribosomal protein L14
79. H3-IX H3-IX 219.42 1766.14
80. TCEB3 ENSGALG00000034625 217.57 1751.25 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
81. RPS16 ENSGALG00000026490 216.95 1746.26 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
82. ELAVL4 ENSGALG00000010533 214.48 1726.37 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
83. EIF4G2 ENSGALG00000005587 213.86 1721.38 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
84. CRHOA CRHOA 210.77 1696.51
85. PSMC6 ENSGALG00000012408 210.15 1691.52 proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
86. SET ENSGALG00000004701 209.53 1686.53 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
87. ATP5G3 207.06 1666.65 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
88. ENSGALG00000018386 ENSGALG00000018386 205.82 1656.67
89. RPL37 ENSGALG00000014833 204.59 1646.77 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
90. RPL35 ENSGALG00000035677 203.97 1641.78 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
91. NME2 ENSGALG00000002932 201.50 1621.90 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
92. RPL23 ENSGALG00000001634 201.50 1621.90 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
93. MBD3 ENSGALG00000001101 200.26 1611.92 methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
94. RPS20 ENSGALG00000014432 197.17 1587.04 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
95. RPS14 ENSGALG00000004588 193.46 1557.18 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
96. ITGB1BP3 ENSGALG00000030120 189.13 1522.33 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
97. NCL ENSGALG00000032930 186.66 1502.45 nucleolin [Source:NCBI gene;Acc:396201]
98. SLC25A6_1 ENSGALG00000016691 185.43 1492.55 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
99. NEFM ENSGALG00000000317 184.19 1482.57 neurofilament medium [Source:NCBI gene;Acc:396206]
100. GNB2L1 ENSGALG00000000122 182.95 1472.59 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA