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Results for RPL29

Gene Name Gene ID Reads Annotation
RPL29 ENSGALG00000026978 271790 ribosomal protein L29 [Source:NCBI gene;Acc:770249]











Genes with expression patterns similar to RPL29

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPL29 ENSGALG00000026978 271790 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
2. RPS21 ENSGALG00000005338 293390 3.133 0.803 0.883 0.724 - - - - - - 0.723 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
3. RPS15A ENSGALG00000006771 287037 2.183 0.721 0.754 - - - - - - - 0.708 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
4. RPL36 ENSGALG00000000474 237707 1.591 0.828 0.763 - - - - - - - - ribosomal protein L36 [Source:NCBI gene;Acc:373936]
5. RPS24 ENSGALG00000004871 173117 1.555 0.853 0.702 - - - - - - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
6. PRDX1 ENSGALG00000010243 151918 1.544 0.828 - - - - - 0.716 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
7. RPL23 ENSGALG00000001634 246592 1.517 0.790 0.727 - - - - - - - - Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
8. RPS16 ENSGALG00000026490 250568 1.501 - - - - 0.755 - - - - 0.746 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
9. RPL36AL ENSGALG00000004952 205590 1.455 0.748 - - - - - 0.707 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
10. RPL23A ENSGALG00000003966 369097 1.432 0.726 0.706 - - - - - - - - ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
11. SEC61G ENSGALG00000037863 83362 0.909 - - - - - - 0.909 - - - Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
12. NDUFA11 ENSGALG00000021692 75804 0.907 - - - - - - 0.907 - - - NADH:ubiquinone oxidoreductase subunit A11
13. HNRNPDL ENSGALG00000023199 112033 0.892 - - - - - - 0.892 - - - heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
14. CKAP4 ENSGALG00000012659 36398 0.879 - - - - - - 0.879 - - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
15. RPS23 ENSGALG00000015617 430299 0.852 0.852 - - - - - - - - - ribosomal protein S23
16. HNRNPU ENSGALG00000010671 56560 0.831 - - - - - - 0.831 - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
17. TCEB3 ENSGALG00000034625 184577 0.828 0.828 - - - - - - - - - transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
18. ST13 ENSGALG00000012007 25670 0.816 - - - - - - 0.816 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
19. BRIX1 ENSGALG00000003373 27878 0.808 - - - - - - 0.808 - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
20. CHPKCI CHPKCI 36217 0.802 0.802 - - - - - - - - -
21. UBE2N ENSGALG00000030515 32059 0.801 - - - - - - 0.801 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
22. RPS25 ENSGALG00000007699 156127 0.8 - - - - - - 0.800 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
23. RPL35A ENSGALG00000007611, ENSGALG00000041230 512292 0.787 - - - 0.787 - - - - - - ribosomal protein L35a [Source:NCBI gene;Acc:424924]
24. RPL14 ENSGALG00000043379 239812 0.784 - 0.784 - - - - - - - - ribosomal protein L14
25. TXN ENSGALG00000015704 170016 0.783 0.783 - - - - - - - - - thioredoxin [Source:NCBI gene;Acc:396437]
26. CLNS1A ENSGALG00000008574 25675 0.778 0.778 - - - - - - - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
27. PARG ENSGALG00000002117 8702 0.776 - - - - - - - 0.776 - - poly(ADP-ribose) glycohydrolase [Source:HGNC Symbol;Acc:HGNC:8605]
28. HSPE1 ENSGALG00000009070 87567 0.773 0.773 - - - - - - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
29. RPL27 ENSGALG00000002837 302752 0.771 0.771 - - - - - - - - - ribosomal protein L27 [Source:NCBI gene;Acc:396280]
30. ATP5G3 168626 0.768 0.768 - - - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
31. UQCRH ENSGALG00000017380 55734 0.761 0.761 - - - - - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
32. RBF RBF 49711 0.76 0.760 - - - - - - - - -
33. ENSGALG00000002696 ENSGALG00000002696 191985 0.757 - - - 0.757 - - - - - -
34. H3-IX H3-IX 155627 0.755 0.755 - - - - - - - - -
35. RPL18A 278781 0.754 0.754 - - - - - - - - - ribosomal protein L18a
36. HDLBP ENSGALG00000005823 24636 0.753 - - - - - - 0.753 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
37. RPS7 ENSGALG00000016392 283283 0.752 - - - - - - - - - 0.752 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
38. SRP14 ENSGALG00000009592 17828 0.75 0.750 - - - - - - - - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
39. MRPL3 ENSGALG00000040873 21053 0.748 - - - - - - - 0.748 - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
40. KPNA2 ENSGALG00000003584 76058 0.747 0.747 - - - - - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
41. ARGLU1 ENSGALG00000016855 25633 0.747 - - - - - - 0.747 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
42. RPL31 ENSGALG00000016775 188657 0.742 0.742 - - - - - - - - - ribosomal protein L31 [Source:NCBI gene;Acc:418710]
43. BTF3 ENSGALG00000013512 33962 0.738 - - - - - - 0.738 - - - basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
44. RPA2 39663 0.736 0.736 - - - - - - - - - replication protein A2
45. EIF1 ENSGALG00000028517 124882 0.734 0.734 - - - - - - - - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
46. PSMA2 ENSGALG00000039387 23620 0.732 0.732 - - - - - - - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
47. MYCBP ENSGALG00000024295 13273 0.727 0.727 - - - - - - - - - MYC binding protein
48. LDHB ENSGALG00000035836 169726 0.727 0.727 - - - - - - - - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
49. RPL7 ENSGALG00000035252 247865 0.724 0.724 - - - - - - - - - ribosomal protein L7 [Source:NCBI gene;Acc:420182]
50. RPS3A ENSGALG00000010077 292185 0.721 - - - - - - 0.721 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
51. RPS3 ENSGALG00000017330 212566 0.718 - 0.718 - - - - - - - - ribosomal protein S3 [Source:NCBI gene;Acc:419069]
52. SNRPB2 28675 0.711 - - - - - - 0.711 - - - small nuclear ribonucleoprotein polypeptide B2
53. ENSGALG00000000360 ENSGALG00000000360 15320 0.71 - - - - - - 0.710 - - -
54. EIF4A2 ENSGALG00000008684 58507 0.709 - - - - - - 0.709 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
55. COX7C ENSGALG00000027963 84312 0.709 - - - - - - 0.709 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
56. UQCR11 ENSGALG00000001096 25245 0.706 - - - 0.706 - - - - - - ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
57. MINOS1 ENSGALG00000004039 37740 0.706 0.706 - - - - - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
58. YWHAZ ENSGALG00000031387 84985 0.704 - - - - - - 0.704 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
59. G3BP1 ENSGALG00000004160 36795 0.701 - - - - - - - 0.701 - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA