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Results for gga-mir-3533

Gene Name Gene ID Reads Annotation
gga-mir-3533 ENSGALG00000027736 789549 gga-mir-3533 [Source:miRBase;Acc:MI0015386]











Genes with expression patterns similar to gga-mir-3533

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-3533 ENSGALG00000027736 789549 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
2. POLR2E ENSGALG00000002591 26405 0.81 - - - - - 0.810 - - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
3. SLC25A6 ENSGALG00000016691 76738 0.795 - - - - - 0.795 - - - - solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
4. EIF1 ENSGALG00000028517 124882 0.791 - - - - - - - - - 0.791 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
5. RPS28 ENSGALG00000024398 244056 0.785 0.785 - - - - - - - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
6. PPIB ENSGALG00000002210 46778 0.783 - - - - - 0.783 - - - - peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
7. ALYREF ENSGALG00000007237 48479 0.779 - - - - - 0.779 - - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
8. RRP9 ENSGALG00000043359 9747 0.778 - - - - - 0.778 - - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
9. EWSR1 ENSGALG00000008149 13014 0.767 - - - - - 0.767 - - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
10. POLDIP2 ENSGALG00000003211 11664 0.762 - - - - - - - - - 0.762 DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
11. ARPC4 ENSGALG00000006691 33311 0.761 0.761 - - - - - - - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
12. EIF5A2 ENSGALG00000009309 143671 0.756 - - - - - 0.756 - - - - eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
13. RPLP0 ENSGALG00000023294 519985 0.754 0.754 - - - - - - - - - ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
14. ID1 ENSGALG00000034661 44524 0.751 - - - - - 0.751 - - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
15. FNDC3AL ENSGALG00000004169 4980 0.744 - - - - - 0.744 - - - - fibronectin type III domain containing 3A-like, transcript variant X3
16. NXN 20202 0.743 - - - - - 0.743 - - - - nucleoredoxin, transcript variant X1
17. TAGLN ENSGALG00000011902 12030 0.741 - - - 0.741 - - - - - - transgelin [Source:NCBI gene;Acc:396490]
18. EXOSC2 ENSGALG00000040373 24275 0.74 - - - - - 0.740 - - - - exosome component 2 [Source:NCBI gene;Acc:417182]
19. ENSGALG00000002595 ENSGALG00000002595 32163 0.739 0.739 - - - - - - - - -
20. METAP2 ENSGALG00000011377 16311 0.734 - - - - - 0.734 - - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
21. CHCHD10 ENSGALG00000028810 10389 0.734 - - - - - 0.734 - - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
22. CDC42SE1 ENSGALG00000028119 14813 0.727 - - - - - - - - - 0.727 CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
23. PKM ENSGALG00000001992 93960 0.725 - - - - - - - - - 0.725 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
24. EI24 ENSGALG00000038097 24081 0.721 - - - - - 0.721 - - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
25. YTHDF2 ENSGALG00000034831 15118 0.721 - - - - - - - - - 0.721 YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
26. HNRNPU ENSGALG00000010671 56560 0.72 - - - - - 0.720 - - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
27. TCOF1 ENSGALG00000005535 24554 0.719 - - - - - 0.719 - - - - treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
28. ACTG2 ENSGALG00000041634 4529 0.719 - - - - 0.719 - - - - - actin, gamma 2, smooth muscle, enteric [Source:NCBI gene;Acc:396084]
29. ALDOC ENSGALG00000026077 106910 0.718 - - - - - 0.718 - - - - aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
30. ENSGALG00000026433 ENSGALG00000026433 14463 0.712 - - - - - 0.712 - - - -
31. ZNF414 ENSGALG00000024378 962 0.711 - - - - - - - - 0.711 - zinc finger protein 414 [Source:HGNC Symbol;Acc:HGNC:20630]
32. ENSGALG00000028649 ENSGALG00000028649 135970 0.709 - - - - - 0.709 - - - -
33. ENSGALG00000022570 ENSGALG00000022570 90374 0.703 - - - - - - - - - 0.703
34. BCAS2 ENSGALG00000002002 22536 0.7 0.700 - - - - - - - - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
35. NONO ENSGALG00000005507 68606 0.7 - - - - - - - - - 0.700 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
36. GAPDH ENSGALG00000014442 755199 0.7 0.700 - - - - - - - - - glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA