Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MBD3

Gene Name Gene ID Reads Annotation
MBD3 ENSGALG00000001101 37265 methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]











Genes with expression patterns similar to MBD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MBD3 ENSGALG00000001101 37265 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
2. NUCKS1 ENSGALG00000000708 80882 2.323 0.781 0.747 0.795 - - - - - - - nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
3. UBE2D1 ENSGALG00000021213 5876 1.672 - - - - - - 0.757 0.915 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
4. CDC42BPA ENSGALG00000009158 3926 1.659 - - - - - - 0.774 0.885 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
5. CHMP6 ENSGALG00000026428 18026 1.63 - - - - - - 0.767 0.863 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
6. GLG1 ENSGALG00000039818 6221 1.548 - - - - - - 0.709 0.839 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
7. RUVBL1 ENSGALG00000005931 9379 1.531 - - - - - - 0.752 0.779 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
8. CHAF1A ENSGALG00000001126 6506 1.515 - - 0.722 - - - - 0.793 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
9. ATG4C ENSGALG00000010985 6102 1.51 - - - - - - 0.704 0.806 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
10. UBE2H ENSGALG00000031975 12964 1.496 0.712 - - - - - 0.784 - - - ubiquitin conjugating enzyme E2 H [Source:NCBI gene;Acc:416678]
11. HPCAL1 ENSGALG00000016443 6633 0.906 - - - - - - - 0.906 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
12. CTSC ENSGALG00000017239 7651 0.9 - - - - - - - 0.900 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
13. CKAP2 ENSGALG00000017025 25020 0.899 - - - - - - - 0.899 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
14. NDUFB3 ENSGALG00000008239 15511 0.896 - - - - - - - 0.896 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
15. DPYD ENSGALG00000005509 4115 0.896 - - - - - - - 0.896 - - dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
16. TSC22D2 ENSGALG00000027591 6594 0.895 - - - - - - - 0.895 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
17. BCAP29 ENSGALG00000008009 8519 0.894 - - - - - - - 0.894 - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
18. PGAM5 ENSGALG00000002137 7700 0.892 - - - - - - - 0.892 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
19. MAPK9 ENSGALG00000039099 5467 0.89 - - - - - - - 0.890 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
20. ZNF326 ENSGALG00000006113 15141 0.89 - - - - - - - 0.890 - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
21. MRPL18 ENSGALG00000011625 7855 0.89 - - - - - - - 0.890 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
22. SNAI2 ENSGALG00000030902 8201 0.89 - - - - - - - 0.890 - - snail family transcriptional repressor 2
23. CHMP3 ENSGALG00000015805 11581 0.889 - - - - - - - 0.889 - - charged multivesicular body protein 3
24. MRPS23 ENSGALG00000005559 10360 0.887 - - - - - - - 0.887 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
25. STAG2 ENSGALG00000008482 13629 0.887 - - - - - - - 0.887 - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
26. HNRNPD ENSGALG00000011184 10686 0.887 - - - - - - - 0.887 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
27. MARC1 ENSGALG00000009453 5675 0.885 - - - - - - - 0.885 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
28. SCO1 ENSGALG00000030475 7304 0.885 - - - - - - - 0.885 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
29. SMDT1 ENSGALG00000011897 9360 0.883 - - - - - - - 0.883 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
30. ENSGALG00000003150 ENSGALG00000003150 10001 0.88 - - - - - - - 0.880 - -
31. BID ENSGALG00000013039 12427 0.88 - - - - - - - 0.880 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
32. ERGIC2 ENSGALG00000007183 12870 0.879 - - - - - - - 0.879 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
33. MED24 ENSGALG00000013506 5403 0.877 - - - - - - - 0.877 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
34. Mar-05 Mar-05 6330 0.872 - - - - - - - 0.872 - -
35. MRPL20 ENSGALG00000001542 28764 0.871 - - - - - - - 0.871 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
36. SNAP29 ENSGALG00000040128 3581 0.871 - - - - - - - 0.871 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
37. GFPT1 ENSGALG00000036391 14025 0.869 - - - - - - - 0.869 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
38. LIG3 ENSGALG00000002288 7198 0.868 - - - - - - - 0.868 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
39. NIFK ENSGALG00000011650 14990 0.865 - - - - - - - 0.865 - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
40. XPO6 ENSGALG00000035360 7042 0.864 - - - - - - - 0.864 - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
41. AHCTF1 ENSGALG00000010630 4809 0.864 - - - - - - - 0.864 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
42. BAG3 ENSGALG00000009433 6152 0.862 - - - - - - - 0.862 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
43. RDM1 ENSGALG00000000243 3388 0.86 - - - - - - - 0.860 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
44. NDUFS6 ENSGALG00000013191 15874 0.859 - - - - - - - 0.859 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
45. CAMSAP2 ENSGALG00000002145 6109 0.859 - - - - - - - 0.859 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
46. FXR1 ENSGALG00000008864 10250 0.858 - - - - - - - 0.858 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
47. GTF2A2 ENSGALG00000003793 5957 0.856 - - - - - - - 0.856 - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
48. NDUFAF1 ENSGALG00000008587 14779 0.855 - - - - - - - 0.855 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
49. PWWP2A ENSGALG00000038202 3686 0.854 - - - - - - - 0.854 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
50. SLC35E3 ENSGALG00000009940 8560 0.852 - - - - - - - 0.852 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
51. KDM4A ENSGALG00000010074 7219 0.852 - - - - - - - 0.852 - - lysine demethylase 4A
52. DKK3 ENSGALG00000005551 7807 0.851 - - - - - - - 0.851 - - dickkopf WNT signaling pathway inhibitor 3 [Source:NCBI gene;Acc:396023]
53. PALLD ENSGALG00000009650 10803 0.85 - - - - - - - 0.850 - - palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]
54. MAST2 ENSGALG00000010313 2975 0.85 - - - - - - - 0.850 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
55. NAE1 ENSGALG00000038957 13777 0.85 - - - - - - - 0.850 - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
56. LATS2 4776 0.85 - - - - - - - 0.850 - - large tumor suppressor kinase 2
57. LIMD1 ENSGALG00000035623 7282 0.848 - - - - - - - 0.848 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
58. NCAM1 ENSGALG00000007839 19929 0.847 - - - - - - - 0.847 - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
59. PPCS ENSGALG00000004882 5759 0.847 - - - - - - - 0.847 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
60. CPQ ENSGALG00000030866 3962 0.846 - - - - - - - 0.846 - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
61. TRIM24 ENSGALG00000012823 2725 0.846 - - - - - - - 0.846 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
62. TCEA1 ENSGALG00000015274 2706 0.845 - - - - - - - 0.845 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
63. CENPH ENSGALG00000014788 10601 0.845 - - - - - - - 0.845 - - centromere protein H [Source:NCBI gene;Acc:395316]
64. PEO1 PEO1 6747 0.845 - - - - - - - 0.845 - -
65. SLC25A1 ENSGALG00000041760 4744 0.842 - - - - - - - 0.842 - - solute carrier family 25 member 1, transcript variant X2
66. VCAN ENSGALG00000015624 11489 0.841 - - - - - - - 0.841 - - versican [Source:NCBI gene;Acc:395565]
67. VGLL4 ENSGALG00000004937 3762 0.839 - - - - - - - 0.839 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
68. SHMT1 ENSGALG00000005046 1430 0.839 - - - - - - 0.839 - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
69. KHDRBS1 ENSGALG00000003272 4249 0.837 - - - - - - - 0.837 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
70. CEP170 ENSGALG00000010733 4177 0.836 - - - - - - - 0.836 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
71. EFTUD2 ENSGALG00000000988 17913 0.836 - - - - - - - 0.836 - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
72. SRP72 ENSGALG00000011403 13666 0.835 - - - - - - - 0.835 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
73. NEK6 ENSGALG00000001118 20333 0.834 - - - - - - 0.834 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
74. EFHD1 ENSGALG00000001428 2831 0.831 - - - - - - - 0.831 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
75. FBXO33 ENSGALG00000010192 2917 0.831 - - - - - - - 0.831 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
76. WASH1 WASH1 3240 0.83 - - - - - - - 0.830 - -
77. BCLAF1 ENSGALG00000013935 7596 0.83 - - - - - - - 0.830 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
78. TARDBP ENSGALG00000002906 24748 0.829 - - - - - - 0.829 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
79. ELL ENSGALG00000033513 6536 0.829 - - - - - - 0.829 - - - elongation factor for RNA polymerase II [Source:NCBI gene;Acc:420124]
80. MLLT10 ENSGALG00000007928 4022 0.828 - - - - - - - 0.828 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
81. C13H5ORF15 C13H5ORF15 11559 0.827 - - - - - - - 0.827 - -
82. TPP2 ENSGALG00000016865 7509 0.825 - - - - - - - 0.825 - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
83. ECHS1 ENSGALG00000024271 9364 0.825 - - - - - - - 0.825 - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
84. MTERFD1 MTERFD1 3640 0.823 - - - - - - - 0.823 - -
85. PIGK ENSGALG00000009015 7942 0.823 - - - - - - - 0.823 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
86. ARFRP1 ENSGALG00000006101 3743 0.823 - - - - - - - 0.823 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
87. BRCC3 ENSGALG00000005383 4844 0.822 - - - - - - - 0.822 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
88. MRPL51 ENSGALG00000014435 29348 0.822 - - - - - - - 0.822 - - mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
89. NET1 ENSGALG00000008437 9850 0.82 - - - - - - - 0.820 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
90. SPG21 ENSGALG00000007262 8050 0.818 - - - - - - - 0.818 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
91. UCK2 ENSGALG00000003510 2512 0.818 - - - - - - - 0.818 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
92. SMIM12 ENSGALG00000030261 5860 0.818 - - - - - - - 0.818 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
93. RNF144A ENSGALG00000028709 2855 0.816 - - - - - - - 0.816 - - ring finger protein 144A, transcript variant X1
94. RNF214 ENSGALG00000036993 3729 0.815 - - - - - - - 0.815 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
95. TXNDC5 ENSGALG00000012784 4678 0.815 - - - - - - - 0.815 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
96. CNOT8 ENSGALG00000003950 8271 0.814 - - - - - - - 0.814 - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
97. DDX19B ENSGALG00000039967 49600 0.812 - - - - - - 0.812 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
98. FGFR1OP ENSGALG00000011423 2418 0.81 - - - - - - - 0.810 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
99. PYCR1 ENSGALG00000007300 7987 0.81 - - - - - - - 0.810 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
100. CCDC61 ENSGALG00000006714 8066 0.809 - - - - - - - 0.809 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]

There are 294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA