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Results for RPSA

Gene Name Gene ID Reads Annotation
RPSA 325288 ribosomal protein SA











Genes with expression patterns similar to RPSA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPSA 325288 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein SA
2. RPL10A ENSGALG00000002644 166422 0.933 - - - - - - 0.933 - - - ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
3. ZNF207 ENSGALG00000003454 47086 0.895 - - - - - - 0.895 - - - zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]
4. COX6A1 ENSGALG00000007205 72629 0.882 - - - - - - 0.882 - - - cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
5. EIF3A ENSGALG00000009328 39982 0.825 - - - - - - 0.825 - - - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
6. PPP2CA ENSGALG00000006462 26306 0.822 - - - - - - 0.822 - - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
7. AKAP12 ENSGALG00000036240 64617 0.812 - - - - - - 0.812 - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
8. NDUFB5 ENSGALG00000009076 32963 0.802 - - - - - - 0.802 - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
9. ERLIN2 ENSGALG00000003092 18251 0.796 - - - - - - 0.796 - - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
10. GPR20 ENSGALG00000041730 1926 0.789 - - - - - 0.789 - - - - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
11. ZC3H15 ENSGALG00000041857 19808 0.783 - - - - - - 0.783 - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
12. HOXA4 ENSGALG00000022622 22327 0.782 - - - - - - 0.782 - - - homeobox A4 [Source:NCBI gene;Acc:395307]
13. RPS20 ENSGALG00000014432 209638 0.774 - - - - - 0.774 - - - - ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
14. HSPA12A ENSGALG00000009248 7783 0.771 - - - - - 0.771 - - - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
15. NANS ENSGALG00000015320 10552 0.769 - - - - - - 0.769 - - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
16. MRPL21 ENSGALG00000004362 20796 0.768 - - - - - - 0.768 - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
17. SPC25 ENSGALG00000010900 14238 0.763 - - - - - - 0.763 - - - SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
18. BTBD1 ENSGALG00000006020 14157 0.761 - - - - - - 0.761 - - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
19. PSMD14 ENSGALG00000011128 13335 0.752 - - - - - - 0.752 - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
20. FAM174A ENSGALG00000026203 8369 0.752 - - - - - - 0.752 - - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
21. USP9X ENSGALG00000016236 9419 0.752 - - - - - - 0.752 - - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
22. OAZ2 ENSGALG00000036288 13213 0.752 - - - - - - 0.752 - - - Gallus gallus ornithine decarboxylase antizyme 2 (OAZ2), mRNA. [Source:RefSeq mRNA;Acc:NM_001142862]
23. THG1L ENSGALG00000003722 7497 0.752 - - - - - - 0.752 - - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
24. ACVR1 ENSGALG00000037301 6448 0.75 - - - - - - 0.750 - - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
25. RBPMS_1 ENSGALG00000010291 16146 0.749 - - - - - - 0.749 - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
26. AP1G1 12403 0.746 - - - - - - 0.746 - - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
27. NTPCR ENSGALG00000011015 8652 0.745 - - - - - - 0.745 - - - nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
28. PRIM2 ENSGALG00000016278 5160 0.743 - - - - - - 0.743 - - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
29. RWDD3 ENSGALG00000038421 10909 0.742 - - - - - - 0.742 - - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
30. ENSGALG00000017691 ENSGALG00000017691 48 0.74 - - - - - 0.740 - - - -
31. NUP153 ENSGALG00000012720 8079 0.738 - - - - - - 0.738 - - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
32. SMARCD2 ENSGALG00000029304 11867 0.737 - - - - - - 0.737 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
33. SP4 ENSGALG00000039454 5597 0.737 - - - - - - 0.737 - - - Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
34. NDUFS5 ENSGALG00000003625 27698 0.737 - - - - - - 0.737 - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
35. SSR2 ENSGALG00000000764 32190 0.736 - - - - - - 0.736 - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
36. SLC12A4 ENSGALG00000034179 5674 0.736 - - - - - - 0.736 - - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
37. EMC1 ENSGALG00000003969 6876 0.735 - - - - - - 0.735 - - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
38. CDH3 5050 0.735 - - - - - - 0.735 - - - cadherin 3
39. MSH6 ENSGALG00000008957 6396 0.735 - - - - - - 0.735 - - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
40. HOXB2 ENSGALG00000025774 5280 0.734 - - - - - - 0.734 - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
41. NUP133 ENSGALG00000011091 3804 0.734 - - - - - - 0.734 - - - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
42. RFC5 ENSGALG00000026517 26113 0.733 - 0.733 - - - - - - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
43. NUP188 ENSGALG00000043394 9288 0.732 - - - - - - 0.732 - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
44. MIPEP ENSGALG00000017118 8666 0.732 - - - - - - 0.732 - - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
45. SLC25A6 ENSGALG00000016691 76738 0.731 - - - - - - - - - 0.731 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
46. KDM4B ENSGALG00000034592 6711 0.731 - - - - - - 0.731 - - - lysine demethylase 4B, transcript variant X8
47. HIBCH ENSGALG00000043307 11990 0.729 - - - - - - 0.729 - - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
48. TCF21 ENSGALG00000029024 8252 0.728 - - - - - - 0.728 - - - transcription factor 21 [Source:NCBI gene;Acc:421697]
49. MMP2 ENSGALG00000003580 13120 0.727 - - - - - 0.727 - - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
50. RNF126 ENSGALG00000042948 4724 0.727 - - - - - - 0.727 - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
51. MEX3A ENSGALG00000014016 3692 0.727 - - - - - - 0.727 - - - mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
52. AMFR ENSGALG00000003107 6560 0.725 - - - - - - 0.725 - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
53. IFT57 ENSGALG00000015356 5540 0.724 - - - - - - 0.724 - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
54. COLEC10 ENSGALG00000033144 3436 0.723 - - - - - 0.723 - - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
55. ANAPC2 ENSGALG00000008625 8822 0.723 - - - - - - 0.723 - - - anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
56. ZNF367 ENSGALG00000012629 3215 0.723 - - - - - - 0.723 - - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
57. ZNF384 ENSGALG00000032599 2369 0.721 - - - - - - 0.721 - - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
58. FBXL21 ENSGALG00000006327 2910 0.721 - - - - - - 0.721 - - - F-box and leucine rich repeat protein 21 [Source:NCBI gene;Acc:416306]
59. MAMDC2 ENSGALG00000015115 1512 0.72 - - - - - - 0.720 - - - MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
60. BAMBI ENSGALG00000040993 7562 0.719 - - - - - 0.719 - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
61. gga-mir-1778 ENSGALG00000025181 8765 0.718 - - - - - 0.718 - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
62. SPAG1 ENSGALG00000033254 1370 0.717 - - - - - - 0.717 - - - sperm associated antigen 1 [Source:HGNC Symbol;Acc:HGNC:11212]
63. GAPDH ENSGALG00000014442 755199 0.71 - 0.710 - - - - - - - - glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
64. MT-ND3 MT-ND3 510729 0.708 - - - - - 0.708 - - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA