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Results for HMGN2

Gene Name Gene ID Reads Annotation
HMGN2 HMGN2 158543











Genes with expression patterns similar to HMGN2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMGN2 HMGN2 158543 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ALYREF ENSGALG00000007237 48479 2.397 - - - - - - - 0.863 0.756 0.778 Aly/REF export factor [Source:NCBI gene;Acc:769169]
3. ENSGALG00000022570 ENSGALG00000022570 90374 1.514 - - - - - 0.796 - - - 0.718
4. PKM ENSGALG00000001992 93960 1.504 - - - - - - - - 0.765 0.739 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
5. ANP32B ENSGALG00000037483 190705 1.443 - - - - - 0.720 - - 0.723 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
6. SQLE ENSGALG00000036915 4172 0.915 - - - - - - - 0.915 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
7. CENPP ENSGALG00000004687 6707 0.906 - - - - - - - 0.906 - - centromere protein P [Source:NCBI gene;Acc:415952]
8. RNF113A ENSGALG00000000538 3985 0.885 - - - - - - - 0.885 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
9. SCLT1 2397 0.884 - - - - - - - 0.884 - - sodium channel and clathrin linker 1, transcript variant X6
10. GGA3 ENSGALG00000007992 3566 0.884 - - - - - - - 0.884 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
11. CARKD CARKD 2914 0.884 - - - - - - - 0.884 - -
12. JKAMP ENSGALG00000012009 5781 0.884 - - - - - - - 0.884 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
13. FAM125B FAM125B 2953 0.884 - - - - - - - 0.884 - -
14. FXN ENSGALG00000015108 1867 0.884 - - - - - - - 0.884 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
15. ENSGALG00000010034 ENSGALG00000010034 3293 0.883 - - - - - - - 0.883 - -
16. RIC8A ENSGALG00000004191 6094 0.883 - - - - - - - 0.883 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
17. NPFF1 NPFF1 3177 0.883 - - - - - - - 0.883 - -
18. KIAA0895L 1739 0.883 - - - - - - - 0.883 - - KIAA0895 like, transcript variant X4
19. TMTC2 ENSGALG00000010975 7040 0.883 - - - - - - - 0.883 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
20. CHMP5 ENSGALG00000013160 13347 0.883 - - - - - - - 0.883 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
21. PDCD2L 4843 0.883 - - - - - - - 0.883 - - programmed cell death 2-like
22. RRN3 ENSGALG00000041989 3934 0.883 - - - - - - - 0.883 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
23. UBALD1 ENSGALG00000007619 8536 0.883 - - - - - - - 0.883 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
24. EIF3D ENSGALG00000012529 40887 0.883 - - - - - - - 0.883 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
25. MADD ENSGALG00000008181 2273 0.883 - - - - - - - 0.883 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
26. HBXIP HBXIP 8637 0.882 - - - - - - - 0.882 - -
27. ATL1 ENSGALG00000012339 3789 0.882 - - - - - - - 0.882 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
28. YTHDC2 2266 0.882 - - - - - - - 0.882 - - YTH domain containing 2, transcript variant X3
29. RBFA ENSGALG00000036067 6542 0.881 - - - - - - - 0.881 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
30. DDX24 ENSGALG00000010884 5485 0.881 - - - - - - - 0.881 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
31. PGM1 ENSGALG00000011016 3391 0.88 - - - - - - - 0.880 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
32. CHTOP ENSGALG00000042129 24112 0.879 - - - - - - - 0.879 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
33. CASP3 ENSGALG00000010638 11572 0.876 - - - - - - - 0.876 - - caspase 3 [Source:NCBI gene;Acc:395476]
34. BSDC1 ENSGALG00000003405 3701 0.876 - - - - - - - 0.876 - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
35. NOC4L ENSGALG00000002272 9644 0.875 - - - - - - - 0.875 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
36. SMC3 ENSGALG00000008585 16618 0.872 - - - - - - - 0.872 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
37. NECAP1 ENSGALG00000037656 5181 0.871 - - - - - - - 0.871 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
38. ARHGAP11A ENSGALG00000009731 6817 0.868 - - - - - - - 0.868 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
39. MMADHC ENSGALG00000012473 9026 0.867 - - - - - - - 0.867 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
40. NDUFA2 ENSGALG00000040626 27899 0.861 - - - - - - - 0.861 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
41. MRPS17 ENSGALG00000002379 30243 0.858 - - - - - - - 0.858 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
42. GCLM ENSGALG00000005782 15789 0.85 - - - - - - - 0.850 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
43. PRKG1 ENSGALG00000003805 4654 0.843 - - - - - - - 0.843 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
44. RPL15 ENSGALG00000011290 415571 0.837 - - - - - - 0.837 - - - ribosomal protein L15 [Source:NCBI gene;Acc:428442]
45. SLC25A6 ENSGALG00000016691 76738 0.835 - - - - - - 0.835 - - - solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
46. HEY1 ENSGALG00000035031 8795 0.815 - - - - - - - - 0.815 - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
47. SNRPF ENSGALG00000011409 23557 0.815 - - - - - - - 0.815 - - small nuclear ribonucleoprotein polypeptide F [Source:NCBI gene;Acc:417916]
48. COL4A6 ENSGALG00000008266 6374 0.807 - - - - - - - 0.807 - - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
49. TTYH2 ENSGALG00000026940 15628 0.798 - - - - - - - - 0.798 - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
50. CWC15 ENSGALG00000017207 30922 0.796 - - - - - - - 0.796 - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
51. SEC11A ENSGALG00000037553 32123 0.79 - - - - - - - 0.790 - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
52. PRPS1 ENSGALG00000004908 27994 0.789 - - - - - - - 0.789 - - phosphoribosyl pyrophosphate synthetase 1
53. MARCKSL1 ENSGALG00000032335 88728 0.782 - - - - - - - - 0.782 - MARCKS like 1 [Source:NCBI gene;Acc:770764]
54. DDX19B ENSGALG00000039967 49600 0.779 - - - - - 0.779 - - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
55. MAPRE1 ENSGALG00000006657 64346 0.775 - - - - - - - 0.775 - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
56. ATF4 ENSGALG00000012135 53361 0.773 - 0.773 - - - - - - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
57. CDC20 ENSGALG00000009971 11197 0.772 - - - - - - - - 0.772 - cell division cycle 20 [Source:NCBI gene;Acc:424563]
58. NONO ENSGALG00000005507 68606 0.766 - - - - - 0.766 - - - - non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
59. UTP11L UTP11L 11927 0.764 - - - - - - - 0.764 - -
60. CHCHD2 ENSGALG00000002495 99536 0.758 - - - - - 0.758 - - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
61. CDCA3 ENSGALG00000014513 17047 0.755 - - - - - - - - 0.755 - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
62. RNH1 ENSGALG00000006904 14542 0.75 - - - - - - - - 0.750 - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
63. SNRPD1 ENSGALG00000041334 219195 0.75 - - - - - - - - 0.750 - small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
64. STRA6 ENSGALG00000001449 8248 0.748 - 0.748 - - - - - - - - stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]
65. PITX2 ENSGALG00000042492 20419 0.747 - - - - - - - 0.747 - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
66. H2AFZ ENSGALG00000014023 117824 0.742 - - - - - - - - 0.742 - H2A histone family, member Z [Source:NCBI gene;Acc:426361]
67. RPLP0 ENSGALG00000023294 519985 0.734 0.734 - - - - - - - - - ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
68. ACAT2 ENSGALG00000011659 12825 0.731 - - - - - - - - 0.731 - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
69. ARG2 ENSGALG00000009519 19523 0.729 - - - - - - - - 0.729 - arginase 2 [Source:NCBI gene;Acc:423272]
70. HMGB2 ENSGALG00000010745 89235 0.729 - - - - - - - - 0.729 - high mobility group box 2 [Source:NCBI gene;Acc:396482]
71. PPIA ENSGALG00000028600 490247 0.728 0.728 - - - - - - - - - peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
72. TCF3 ENSGALG00000001093 15624 0.718 - - - - - 0.718 - - - - transcription factor 3 [Source:NCBI gene;Acc:395146]
73. CCDC59 ENSGALG00000028648 9272 0.715 - - - - - - - 0.715 - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
74. ENSGALG00000026433 ENSGALG00000026433 14463 0.714 - 0.714 - - - - - - - -
75. CKS1B ENSGALG00000028664 42261 0.711 0.711 - - - - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
76. PIK3IP1 ENSGALG00000006942 8388 0.709 - - - - - - - 0.709 - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
77. HOXD8 ENSGALG00000037272 4338 0.708 - - - - - 0.708 - - - - homeobox D8 [Source:NCBI gene;Acc:396301]
78. AN1ZNF5L ENSGALG00000014589 21148 0.708 - - - - - - - 0.708 - - AN1-type zinc finger protein 5-like, transcript variant X2
79. SDOS SDOS 66125 0.706 - - - - - - - - 0.706 -
80. SSB ENSGALG00000009677 25335 0.706 - - - - - - - 0.706 - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
81. TRAIP ENSGALG00000002908 6901 0.705 - - - - - - - - 0.705 - TRAF interacting protein [Source:NCBI gene;Acc:415927]
82. RTN4 ENSGALG00000029261 45730 0.703 - - - - - - - 0.703 - - reticulon 4 [Source:NCBI gene;Acc:378790]
83. SF3B6 ENSGALG00000016501 28236 0.702 - - - - - - - 0.702 - - splicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
84. SELT SELT 25524 0.701 - - - - - - - 0.701 - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA