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Experiment Chicken_E3_embryo, section s90.

Sample reads: 113,460. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4734.73 41733.60
2. EEF1A EEF1A 1461.18 12879.36
3. MT-ATP6 MT-ATP6 1087.06 9581.74
4. CIRBP ENSGALG00000030918 994.42 8765.17 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
5. gga-mir-3533 ENSGALG00000027736 929.12 8189.60 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. RPLP0 ENSGALG00000023294 777.36 6851.93 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. GAPDH ENSGALG00000014442 752.65 6634.13 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 750.89 6618.61 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. RPLP1 ENSGALG00000030878 728.83 6424.17 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
10. RPL15 ENSGALG00000011290 691.77 6097.51 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
11. RPL23A ENSGALG00000003966 684.71 6035.28 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
12. RPS10 ENSGALG00000002813 677.65 5973.05 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
13. RPS23 ENSGALG00000015617 578.83 5102.01 ribosomal protein S23
14. RPS11 ENSGALG00000017299 575.30 5070.90 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
15. SNRPD1 ENSGALG00000041334 560.30 4938.68 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
16. MT-ND5 MT-ND5 553.24 4876.46
17. RPL4 ENSGALG00000007711 553.24 4876.46 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
18. PPIA ENSGALG00000028600 527.65 4650.90 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
19. RPSA 519.71 4580.91 ribosomal protein SA
20. MDK ENSGALG00000008367 516.18 4549.80 midkine [Source:NCBI gene;Acc:423196]
21. RPL27A ENSGALG00000005948 512.65 4518.68 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
22. RPL19 ENSGALG00000001658 496.77 4378.71 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
23. RPL8 ENSGALG00000016232 495.89 4370.95 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. RPS6 ENSGALG00000015082 490.59 4324.24 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
25. RPL13 ENSGALG00000006179 461.47 4067.56 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
26. RPL26 RPL26 441.18 3888.72
27. RPL38 ENSGALG00000001465 439.41 3873.12 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
28. RPL7A ENSGALG00000003197 435.88 3842.00 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
29. RPS8 ENSGALG00000010124 434.12 3826.49 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
30. RPS21 ENSGALG00000005338 425.30 3748.75 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
31. RPL29 ENSGALG00000026978 415.59 3663.16 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
32. MT-ND4 MT-ND4 411.18 3624.29
33. GNB2L1 ENSGALG00000000122 410.30 3616.53 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
34. NME2 ENSGALG00000002932 407.65 3593.17 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
35. RPL35 ENSGALG00000035677 407.65 3593.17 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
36. RPL37 ENSGALG00000014833 391.77 3453.20 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
37. MT-CYB MT-CYB 390.88 3445.36
38. gga-mir-3527 gga-mir-3527 389.12 3429.84
39. RPS2 ENSGALG00000005490 388.24 3422.09 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
40. RPS29 ENSGALG00000012229 386.47 3406.48 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
41. RPL12 ENSGALG00000008806 382.06 3367.61 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
42. RPS16 ENSGALG00000026490 382.06 3367.61 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPS15A ENSGALG00000006771 378.53 3336.50 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
44. HBG1 HBG1 370.59 3266.51
45. RPS3A ENSGALG00000010077 369.71 3258.76 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
46. MT-CO1 MT-CO1 364.41 3212.04
47. RPL27 ENSGALG00000002837 364.41 3212.04 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
48. RPL32 ENSGALG00000027142 360.00 3173.17 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
49. RPS4 RPS4 347.65 3064.31
50. RPL6 ENSGALG00000004818 345.88 3048.71 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
51. TXN ENSGALG00000015704 345.88 3048.71 thioredoxin [Source:NCBI gene;Acc:396437]
52. RPL36 ENSGALG00000000474 339.71 2994.33 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
53. RPS12 ENSGALG00000013990 338.83 2986.57 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
54. HMGN5 ENSGALG00000007131 336.18 2963.21 high mobility group nucleosome binding domain 5, transcript variant X1
55. RPS15 ENSGALG00000015195 332.65 2932.10 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
56. RPS27A ENSGALG00000036790 328.24 2893.22 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
57. RPS28 ENSGALG00000024398 303.53 2675.42 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
58. RPL21 ENSGALG00000027035 299.12 2636.55 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
59. PHB2 ENSGALG00000014567 292.94 2582.08 prohibitin 2 [Source:NCBI gene;Acc:771124]
60. TCEB3 ENSGALG00000034625 292.06 2574.32 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
61. MT-ND3 MT-ND3 285.00 2512.09
62. RPL37A ENSGALG00000011472 274.41 2418.75 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
63. RPS14 ENSGALG00000004588 265.59 2341.01 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
64. RPS7 ENSGALG00000016392 264.71 2333.25 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. RPL18A 262.94 2317.65 ribosomal protein L18a
66. RPL5 ENSGALG00000005922 262.94 2317.65 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
67. ANP32B ENSGALG00000037483 261.18 2302.13 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
68. SET ENSGALG00000004701 259.41 2286.53 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
69. RPL24 ENSGALG00000015339 256.77 2263.26 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
70. EIF5A2 ENSGALG00000009309 255.88 2255.42 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
71. PRDX1 ENSGALG00000010243 255.88 2255.42 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
72. RPLP2 ENSGALG00000034811 255.88 2255.42 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
73. H3-IX H3-IX 252.35 2224.30
74. ENSGALG00000028649 ENSGALG00000028649 250.59 2208.79
75. RPS20 ENSGALG00000014432 249.71 2201.03 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
76. CRHOA CRHOA 248.82 2193.19
77. RPS13 ENSGALG00000006096 244.41 2154.32 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
78. RPL23 ENSGALG00000001634 240.88 2123.20 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
79. SLC25A6_1 ENSGALG00000016691 240.88 2123.20 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
80. STMN1 ENSGALG00000001475 240.00 2115.45 stathmin 1 [Source:NCBI gene;Acc:396057]
81. AKAP12 ENSGALG00000036240 237.35 2092.09 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
82. RPL36AL ENSGALG00000004952 234.71 2068.82 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
83. ATP5G3 232.94 2053.22 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
84. RPL14 ENSGALG00000043379 232.94 2053.22 ribosomal protein L14
85. UBB ENSGALG00000004509 227.65 2006.59 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
86. MBD3 ENSGALG00000001101 225.00 1983.23 methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
87. EEF1D 222.35 1959.87 eukaryotic translation elongation factor 1 delta, transcript variant X13
88. RPS25 ENSGALG00000007699 221.47 1952.12 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
89. ENO1 ENSGALG00000002377 217.06 1913.24 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
90. MT-ND1 MT-ND1 215.30 1897.73
91. EIF4G2 ENSGALG00000005587 213.53 1882.13 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
92. TMSB4X ENSGALG00000026383 212.65 1874.37 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
93. HBZ ENSGALG00000023740 211.77 1866.62 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
94. HMGN2 HMGN2 210.00 1851.02
95. HNRNPDL ENSGALG00000023199 201.18 1773.27 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
96. ENSGALG00000002696 ENSGALG00000002696 200.30 1765.52
97. RPL31 ENSGALG00000016775 192.35 1695.44 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
98. RPS17 ENSGALG00000002157 187.06 1648.81 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
99. RPL7 ENSGALG00000035252 182.65 1609.94 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
100. LDHB ENSGALG00000035836 180.88 1594.34 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA