Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_embryo, section s41.

Sample reads: 113,637. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4972.07 43756.85
2. HBG1 HBG1 2111.04 18578.27
3. HBZ ENSGALG00000023740 1681.46 14797.74 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
4. MT-ATP6 MT-ATP6 1368.13 12040.27
5. HBE 1241.95 10929.82 hemoglobin subunit epsilon
6. EEF1A EEF1A 1093.09 9619.77
7. MT-ND5 MT-ND5 1057.65 9307.88
8. gga-mir-3533 ENSGALG00000027736 968.33 8521.82 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. CIRBP ENSGALG00000030918 922.96 8122.54 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
10. MDK ENSGALG00000008367 877.59 7723.26 midkine [Source:NCBI gene;Acc:423196]
11. RPLP0 ENSGALG00000023294 873.34 7685.85 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
12. RPL35A ENSGALG00000007611, ENSGALG00000041230 856.32 7536.07 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
13. RPLP1 ENSGALG00000030878 805.29 7086.98 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
14. GAPDH ENSGALG00000014442 749.99 6600.31 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
15. RPL15 ENSGALG00000011290 704.62 6201.03 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
16. RPS10 ENSGALG00000002813 689.03 6063.83 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
17. RPL23A ENSGALG00000003966 687.61 6051.33 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
18. RPS23 ENSGALG00000015617 663.51 5839.24 ribosomal protein S23
19. MT-CYB MT-CYB 603.96 5315.17
20. RPL4 ENSGALG00000007711 602.55 5302.76 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
21. MT-ND4 MT-ND4 558.60 4915.98
22. PPIA ENSGALG00000028600 551.51 4853.58 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
23. SNRPD1 ENSGALG00000041334 523.15 4604.00 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
24. RPL13 ENSGALG00000006179 503.30 4429.31 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
25. RPL19 ENSGALG00000001658 497.63 4379.41 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
26. RPS11 ENSGALG00000017299 489.13 4304.60 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
27. RPL27A ENSGALG00000005948 487.71 4292.11 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
28. RPS21 ENSGALG00000005338 487.71 4292.11 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
29. RPS8 ENSGALG00000010124 486.29 4279.61 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
30. RPSA 477.78 4204.72 ribosomal protein SA
31. RPS6 ENSGALG00000015082 445.18 3917.82 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
32. RPS12 ENSGALG00000013990 440.92 3880.33 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
33. RPS29 ENSGALG00000012229 439.50 3867.83 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
34. RPL12 ENSGALG00000008806 438.09 3855.42 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
35. ENSGALG00000028649 ENSGALG00000028649 426.74 3755.54
36. RPS28 ENSGALG00000024398 425.33 3743.13 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
37. RPS3A ENSGALG00000010077 419.66 3693.23 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
38. RPL8 ENSGALG00000016232 418.24 3680.73 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
39. RPL38 ENSGALG00000001465 415.40 3655.74 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
40. RPL29 ENSGALG00000026978 411.15 3618.34 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. gga-mir-3527 gga-mir-3527 409.73 3605.84
42. RPS2 ENSGALG00000005490 406.90 3580.94 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
43. RPS15 ENSGALG00000015195 388.47 3418.74 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
44. RPL35 ENSGALG00000035677 387.05 3406.24 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
45. RPL7A ENSGALG00000003197 371.45 3268.96 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
46. GNB2L1 ENSGALG00000000122 367.20 3231.55 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
47. NME2 ENSGALG00000002932 362.95 3194.15 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
48. RPL26 RPL26 362.95 3194.15
49. RPL21 ENSGALG00000027035 355.86 3131.76 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
50. RPS4 RPS4 355.86 3131.76
51. HMGN5 ENSGALG00000007131 351.60 3094.27 high mobility group nucleosome binding domain 5, transcript variant X1
52. MT-CO1 MT-CO1 348.77 3069.36
53. RPL27 ENSGALG00000002837 348.77 3069.36 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
54. RPS27A ENSGALG00000036790 343.10 3019.46 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
55. TXN ENSGALG00000015704 341.68 3006.96 thioredoxin [Source:NCBI gene;Acc:396437]
56. RPL32 ENSGALG00000027142 328.92 2894.67 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
57. RPS16 ENSGALG00000026490 327.50 2882.17 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
58. RPL6 ENSGALG00000004818 326.08 2869.68 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
59. RPS15A ENSGALG00000006771 326.08 2869.68 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
60. ALDOC ENSGALG00000026077 323.25 2844.77 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
61. RPL36 ENSGALG00000000474 316.16 2782.38 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
62. RPL37 ENSGALG00000014833 306.24 2695.07 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
63. RPS14 ENSGALG00000004588 287.80 2532.79 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
64. PHB2 ENSGALG00000014567 283.55 2495.39 prohibitin 2 [Source:NCBI gene;Acc:771124]
65. RPL37A ENSGALG00000011472 277.88 2445.49 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
66. RPL24 ENSGALG00000015339 272.21 2395.59 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
67. RPL14 ENSGALG00000043379 267.96 2358.19 ribosomal protein L14
68. TCEB3 ENSGALG00000034625 267.96 2358.19 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
69. ANP32B ENSGALG00000037483 266.54 2345.69 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
70. RPS7 ENSGALG00000016392 266.54 2345.69 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
71. ENSGALG00000002696 ENSGALG00000002696 260.87 2295.79
72. MT-ND1 MT-ND1 259.45 2283.30
73. RPL18A 256.61 2258.30 ribosomal protein L18a
74. HMGN2 HMGN2 252.36 2220.90
75. EIF5A2 ENSGALG00000009309 250.94 2208.40 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
76. RPL5 ENSGALG00000005922 239.60 2108.61 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
77. TMSB4X ENSGALG00000026383 238.18 2096.11 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
78. RPS13 ENSGALG00000006096 233.93 2058.71 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
79. RPL23 ENSGALG00000001634 232.51 2046.21 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
80. RPL7 ENSGALG00000035252 229.68 2021.31 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
81. RPS25 ENSGALG00000007699 228.26 2008.81 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
82. MT-ND3 MT-ND3 224.01 1971.41
83. RPL36AL ENSGALG00000004952 224.01 1971.41 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
84. UBB ENSGALG00000004509 222.59 1958.91 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
85. ENO1 ENSGALG00000002377 221.17 1946.41 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
86. LDHB ENSGALG00000035836 221.17 1946.41 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
87. ATP5G3 219.75 1933.92 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
88. CRHOA CRHOA 218.33 1921.42
89. RPS20 ENSGALG00000014432 218.33 1921.42 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
90. SET ENSGALG00000004701 211.25 1859.11 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
91. ENSGALG00000028992 ENSGALG00000028992 205.57 1809.12
92. EEF1D 204.16 1796.72 eukaryotic translation elongation factor 1 delta, transcript variant X13
93. MBD3 ENSGALG00000001101 202.74 1784.22 methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
94. PRDX1 ENSGALG00000010243 195.65 1721.82 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
95. STMN1 ENSGALG00000001475 195.65 1721.82 stathmin 1 [Source:NCBI gene;Acc:396057]
96. ENSGALG00000018384 ENSGALG00000018384 194.23 1709.33
97. RPL10A ENSGALG00000002644 189.98 1671.92 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
98. ENSGALG00000022570 ENSGALG00000022570 184.31 1622.03
99. FKBP4 ENSGALG00000014331 184.31 1622.03 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
100. HNRNPDL ENSGALG00000023199 181.47 1597.03 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA