Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZIC5

Gene Name Gene ID Reads Annotation
ZIC5 ENSG00000139800 441 Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]



Genes with expression patterns similar to ZIC5

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. ZIC5 ENSG00000139800 441 2 1.000 1.000 Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
2. ZIC1 ENSG00000152977 18260 1.75 0.878 0.872 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
3. ZIC4 ENSG00000174963 2667 1.748 0.904 0.844 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
4. ZIC2 ENSG00000043355 4457 1.713 0.883 0.830 Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
5. ZIC3 ENSG00000156925 420 1.696 0.883 0.813 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
6. SOX2 ENSG00000181449 19791 1.667 0.926 0.741 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
7. RND2 ENSG00000108830 3761 1.643 0.889 0.754 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
8. HES6 ENSG00000144485 4284 1.638 0.857 0.781 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
9. LINC00461 ENSG00000245526 4465 1.637 0.901 0.736 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
10. CRABP1 ENSG00000166426 2178 1.615 0.890 0.725 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
11. APCDD1 ENSG00000154856 2448 1.614 0.803 0.811 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
12. IGFBPL1 ENSG00000137142 3283 1.571 0.799 0.772 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
13. FZD10 ENSG00000111432 608 1.567 0.851 0.716 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
14. ARL4A ENSG00000122644 3071 1.558 0.834 0.724 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
15. MSI1 ENSG00000135097 6935 1.558 0.828 0.730 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
16. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.553 0.802 0.751 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
17. CKB ENSG00000166165 54181 1.551 0.815 0.736 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
18. RFX4 ENSG00000111783 1382 1.549 0.809 0.740 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
19. POU3F2 ENSG00000184486 2683 1.544 0.840 0.704 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
20. DTX4 ENSG00000110042 2639 1.52 0.795 0.725 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
21. GDF10 ENSG00000266524 711 1.495 0.770 0.725 growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
22. DCC ENSG00000187323 538 1.493 0.792 0.701 DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
23. SLC1A3 ENSG00000079215 1362 1.474 0.751 0.723 solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
24. TMEM158 ENSG00000249992 678 1.468 0.761 0.707 transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
25. FAM167A ENSG00000154319 299 1.46 0.743 0.717 family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]
26. HOXB-AS3 ENSG00000233101 1776 0.897 0.897 - HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
27. TKTL1 ENSG00000007350 1212 0.886 0.886 - transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
28. SCUBE2 ENSG00000175356 1730 0.88 0.880 - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
29. TOX3 ENSG00000103460 1758 0.879 0.879 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
30. SOX1 ENSG00000182968 1339 0.866 0.866 - SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
31. DLL1 ENSG00000198719, ENSG00000275555 1642 0.85 0.850 - delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
32. HES5 ENSG00000197921, ENSG00000273529 9293 0.848 0.848 - hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
33. SYT2 ENSG00000143858 2364 0.844 0.844 - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
34. WSCD1 ENSG00000179314 1121 0.844 0.844 - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
35. RHBDL3 ENSG00000141314 2571 0.833 0.833 - rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
36. SLC1A2 ENSG00000110436 1231 0.827 0.827 - solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
37. OLIG3 ENSG00000177468 918 0.827 0.827 - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
38. SEMA5B ENSG00000082684 2716 0.826 0.826 - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
39. AXIN2 ENSG00000168646 2778 0.824 0.824 - axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
40. HOXB2 ENSG00000173917 6040 0.822 0.822 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
41. PRDM13 ENSG00000112238 312 0.82 0.820 - PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
42. ENPP2 ENSG00000136960 3320 0.814 0.814 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
43. SLC2A1 ENSG00000117394 2892 0.809 0.809 - solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
44. HS6ST1 ENSG00000136720 4974 0.805 0.805 - heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
45. FAM181A ENSG00000140067, ENSG00000273533 1757 0.804 0.804 - family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
46. FZD3 ENSG00000104290 11650 0.803 0.803 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
47. SOX3 ENSG00000134595 5297 0.802 0.802 - SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
48. ASRGL1 ENSG00000162174 4293 0.802 0.802 - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
49. ZBTB16 ENSG00000109906 287 0.8 0.800 - zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
50. FGFR3 ENSG00000068078 2862 0.8 0.800 - fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
51. LINC00925 LINC00925 517 0.799 0.799 -
52. METRN ENSG00000103260 1750 0.798 - 0.798 meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
53. NRARP ENSG00000198435 1658 0.797 0.797 - NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
54. SP5 ENSG00000204335 211 0.796 0.796 - Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
55. SRGAP3 ENSG00000196220 5297 0.796 0.796 - SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
56. HOXB3 ENSG00000120093 4812 0.794 0.794 - homeobox B3 [Source:HGNC Symbol;Acc:HGNC:5114]
57. WNT1 ENSG00000125084 1392 0.793 0.793 - Wnt family member 1 [Source:HGNC Symbol;Acc:HGNC:12774]
58. NKD1 ENSG00000140807 2100 0.786 0.786 - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
59. PDPN ENSG00000162493 5095 0.785 0.785 - podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
60. PAK3 ENSG00000077264 890 0.784 0.784 - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
61. LFNG ENSG00000106003 1260 0.782 0.782 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
62. LOC100240734 1898 0.781 0.781 - uncharacterized LOC100240734
63. MAP6 ENSG00000171533 1692 0.781 - 0.781 microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
64. CSPG5 ENSG00000114646 558 0.781 0.781 - chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
65. SALL1 ENSG00000103449 458 0.78 0.780 - spalt like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10524]
66. TSPAN18 ENSG00000157570 9391 0.78 0.780 - tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
67. WNT3A ENSG00000154342 267 0.78 0.780 - Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
68. MIAT ENSG00000225783 2977 0.778 0.778 - myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
69. TMEM257 484 0.777 0.777 - transmembrane protein 257
70. CXCR4 ENSG00000121966 4708 0.774 - 0.774 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
71. RGS16 ENSG00000143333 2239 0.772 - 0.772 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
72. LRRN1 ENSG00000175928 3973 0.771 0.771 - leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:HGNC:20980]
73. GPR17 ENSG00000144230 140 0.77 - 0.770 G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
74. AGO1 ENSG00000092847 2525 0.77 0.770 - argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
75. RASSF2 ENSG00000101265 1157 0.766 0.766 - Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
76. SLITRK2 ENSG00000185985 905 0.766 0.766 - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
77. CRNDE ENSG00000245694 3754 0.765 0.765 - colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
78. NOTCH1 ENSG00000148400 5516 0.765 0.765 - notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
79. HOXC5 ENSG00000172789, ENSG00000273046 4001 0.76 0.760 - homeobox C5 [Source:NCBI gene;Acc:3222]
80. ADGRG1 ENSG00000205336 800 0.757 - 0.757 adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
81. RGMA ENSG00000182175 3405 0.757 0.757 - repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
82. NRIP3 ENSG00000175352 238 0.754 0.754 - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
83. FLJ12825 ENSG00000248265 822 0.753 0.753 - uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
84. MSX1 ENSG00000163132 2038 0.753 0.753 - msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
85. PAX3 ENSG00000135903 1126 0.753 0.753 - paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
86. HOTAIRM1 ENSG00000233429 3208 0.749 0.749 - HOXA transcript antisense RNA, myeloid-specific 1 [Source:HGNC Symbol;Acc:HGNC:37117]
87. MIR124-2HG ENSG00000254377 940 0.749 - 0.749 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
88. SOX21 ENSG00000125285 209 0.749 0.749 - SRY-box 21 [Source:HGNC Symbol;Acc:HGNC:11197]
89. PAX6 ENSG00000007372 3710 0.747 0.747 - paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
90. SYT11 ENSG00000132718 3832 0.746 - 0.746 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
91. SKI ENSG00000157933 7837 0.743 0.743 - SKI proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10896]
92. LAMC3 ENSG00000050555 1951 0.742 0.742 - laminin subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:6494]
93. RPS21 ENSG00000171858 88328 0.742 0.742 - ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
94. OTP ENSG00000171540 179 0.739 0.739 - orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
95. RGS20 ENSG00000147509 282 0.738 0.738 - regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
96. FZD10-AS1 1074 0.735 0.735 - FZD10 antisense RNA 1 (head to head)
97. NES ENSG00000132688 20034 0.734 - 0.734 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
98. HOXA2 ENSG00000105996 1727 0.733 0.733 - homeobox A2 [Source:HGNC Symbol;Acc:HGNC:5103]
99. GLDC ENSG00000178445 513 0.732 0.732 - glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
100. PRTG ENSG00000166450 16951 0.731 0.731 - protogenin [Source:HGNC Symbol;Acc:HGNC:26373]

There are 31 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA