Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZIC3

Gene Name Gene ID Reads Annotation
ZIC3 ENSG00000156925 420 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]



Genes with expression patterns similar to ZIC3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. ZIC3 ENSG00000156925 420 2 1.000 1.000 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
2. ZIC4 ENSG00000174963 2667 1.801 0.882 0.919 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
3. ARL4A ENSG00000122644 3071 1.765 0.917 0.848 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
4. SOX2 ENSG00000181449 19791 1.703 0.884 0.819 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
5. ZIC5 ENSG00000139800 441 1.696 0.883 0.813 Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
6. ZIC2 ENSG00000043355 4457 1.696 0.848 0.848 Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
7. CRABP1 ENSG00000166426 2178 1.695 0.854 0.841 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
8. PRDM13 ENSG00000112238 312 1.694 0.880 0.814 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
9. RND2 ENSG00000108830 3761 1.686 0.827 0.859 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
10. LINC00461 ENSG00000245526 4465 1.668 0.864 0.804 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
11. HOXB-AS3 ENSG00000233101 1776 1.662 0.901 0.761 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
12. ZIC1 ENSG00000152977 18260 1.659 0.806 0.853 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
13. POU3F2 ENSG00000184486 2683 1.65 0.854 0.796 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
14. FZD10 ENSG00000111432 608 1.645 0.866 0.779 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
15. APCDD1 ENSG00000154856 2448 1.641 0.773 0.868 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
16. OLIG3 ENSG00000177468 918 1.639 0.845 0.794 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
17. HES6 ENSG00000144485 4284 1.634 0.754 0.880 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
18. SYT2 ENSG00000143858 2364 1.624 0.887 0.737 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
19. SOX1 ENSG00000182968 1339 1.615 0.862 0.753 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
20. CKB ENSG00000166165 54181 1.611 0.786 0.825 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
21. DLL1 ENSG00000198719, ENSG00000275555 1642 1.606 0.826 0.780 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
22. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.606 0.765 0.841 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
23. GLDC ENSG00000178445 513 1.594 0.793 0.801 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
24. PAX3 ENSG00000135903 1126 1.588 0.813 0.775 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
25. IGFBPL1 ENSG00000137142 3283 1.586 0.701 0.885 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
26. DTX4 ENSG00000110042 2639 1.584 0.793 0.791 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
27. MSI1 ENSG00000135097 6935 1.58 0.825 0.755 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
28. LOC100240734 1898 1.578 0.807 0.771 uncharacterized LOC100240734
29. GDF10 ENSG00000266524 711 1.574 0.787 0.787 growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
30. HES5 ENSG00000197921, ENSG00000273529 9293 1.571 0.854 0.717 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
31. WSCD1 ENSG00000179314 1121 1.57 0.816 0.754 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
32. RHBDL3 ENSG00000141314 2571 1.566 0.807 0.759 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
33. AXIN2 ENSG00000168646 2778 1.564 0.839 0.725 axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
34. NKD1 ENSG00000140807 2100 1.536 0.792 0.744 naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
35. ZBTB16 ENSG00000109906 287 1.536 0.727 0.809 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
36. MSX1 ENSG00000163132 2038 1.532 0.737 0.795 msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
37. RASSF2 ENSG00000101265 1157 1.527 0.796 0.731 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
38. WNT3A ENSG00000154342 267 1.525 0.741 0.784 Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
39. HS6ST1 ENSG00000136720 4974 1.523 0.749 0.774 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
40. LFNG ENSG00000106003 1260 1.517 0.706 0.811 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
41. FLJ12825 ENSG00000248265 822 1.508 0.799 0.709 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
42. WNT1 ENSG00000125084 1392 1.507 0.757 0.750 Wnt family member 1 [Source:HGNC Symbol;Acc:HGNC:12774]
43. SP5 ENSG00000204335 211 1.5 0.722 0.778 Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
44. NOTCH1 ENSG00000148400 5516 1.499 0.734 0.765 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
45. BTG3 ENSG00000154640, ENSG00000281484 4437 1.488 0.700 0.788 BTG anti-proliferation factor 3 [Source:HGNC Symbol;Acc:HGNC:1132]
46. FAM167A ENSG00000154319 299 1.482 0.782 0.700 family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]
47. ADCYAP1R1 ENSG00000078549 321 1.476 0.707 0.769 ADCYAP receptor type I [Source:HGNC Symbol;Acc:HGNC:242]
48. RFX4 ENSG00000111783 1382 1.464 0.743 0.721 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
49. NPAS3 ENSG00000151322 1043 1.443 0.714 0.729 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
50. DCLK2 ENSG00000170390 3503 1.437 0.726 0.711 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
51. CTNND2 ENSG00000169862 1640 1.433 0.730 0.703 catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
52. JAM2 ENSG00000154721 1771 1.432 0.714 0.718 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
53. NRARP ENSG00000198435 1658 1.424 0.717 0.707 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
54. TKTL1 ENSG00000007350 1212 0.933 0.933 - transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
55. SCUBE2 ENSG00000175356 1730 0.917 0.917 - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
56. RGS20 ENSG00000147509 282 0.874 0.874 - regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
57. KCNK10 ENSG00000100433 145 0.847 - 0.847 potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
58. DCC ENSG00000187323 538 0.845 - 0.845 DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
59. ADGRG1 ENSG00000205336 800 0.831 - 0.831 adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
60. SLC1A2 ENSG00000110436 1231 0.83 0.830 - solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
61. TOX3 ENSG00000103460 1758 0.828 0.828 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
62. MAP6 ENSG00000171533 1692 0.825 - 0.825 microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
63. OTP ENSG00000171540 179 0.823 0.823 - orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
64. HOXB9 ENSG00000170689 2051 0.816 - 0.816 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
65. CECR2 ENSG00000099954 2223 0.816 - 0.816 CECR2, histone acetyl-lysine reader [Source:HGNC Symbol;Acc:HGNC:1840]
66. RGS16 ENSG00000143333 2239 0.814 - 0.814 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
67. NRIP3 ENSG00000175352 238 0.807 0.807 - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
68. CCER2 ENSG00000262484, ENSG00000283099 118 0.805 - 0.805 coiled-coil glutamate rich protein 2 [Source:HGNC Symbol;Acc:HGNC:44662]
69. MIR124-2HG ENSG00000254377 940 0.804 - 0.804 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
70. NEUROG2 ENSG00000178403 514 0.801 - 0.801 neurogenin 2 [Source:HGNC Symbol;Acc:HGNC:13805]
71. CXCR4 ENSG00000121966 4708 0.801 - 0.801 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
72. FGFR3 ENSG00000068078 2862 0.801 0.801 - fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
73. SOX21 ENSG00000125285 209 0.8 0.800 - SRY-box 21 [Source:HGNC Symbol;Acc:HGNC:11197]
74. CSPG5 ENSG00000114646 558 0.8 0.800 - chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
75. CCDC85C ENSG00000205476 3808 0.799 - 0.799 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
76. SEMA5B ENSG00000082684 2716 0.799 0.799 - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
77. CRNDE ENSG00000245694 3754 0.797 0.797 - colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
78. SLC2A1 ENSG00000117394 2892 0.788 0.788 - solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
79. TMEM132C ENSG00000181234 1913 0.788 - 0.788 transmembrane protein 132C [Source:HGNC Symbol;Acc:HGNC:25436]
80. FAM159B 132 0.787 - 0.787 family with sequence similarity 159 member B
81. HAGLR ENSG00000224189 572 0.787 - 0.787 HOXD antisense growth-associated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:43755]
82. WASF3 ENSG00000132970 6777 0.782 0.782 - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
83. GADD45G ENSG00000130222 360 0.781 - 0.781 growth arrest and DNA damage inducible gamma [Source:HGNC Symbol;Acc:HGNC:4097]
84. HOXB3 ENSG00000120093 4812 0.777 0.777 - homeobox B3 [Source:HGNC Symbol;Acc:HGNC:5114]
85. ENPP2 ENSG00000136960 3320 0.775 0.775 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
86. CCDC140 ENSG00000163081 233 0.774 - 0.774 coiled-coil domain containing 140 [Source:HGNC Symbol;Acc:HGNC:26514]
87. KIAA1147 ENSG00000257093, ENSG00000262599 2599 0.774 0.774 - KIAA1147 [Source:HGNC Symbol;Acc:HGNC:29472]
88. SOX3 ENSG00000134595 5297 0.771 0.771 - SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
89. HOXB8 ENSG00000120068 2378 0.77 - 0.770 homeobox B8 [Source:HGNC Symbol;Acc:HGNC:5119]
90. SYT11 ENSG00000132718 3832 0.77 - 0.770 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
91. PDPN ENSG00000162493 5095 0.769 0.769 - podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
92. SLC17A6 ENSG00000091664 75 0.767 - 0.767 solute carrier family 17 member 6 [Source:HGNC Symbol;Acc:HGNC:16703]
93. PAX6 ENSG00000007372 3710 0.767 0.767 - paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
94. NCKAP5 ENSG00000176771 481 0.764 - 0.764 NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]
95. DLL3 ENSG00000090932 826 0.762 - 0.762 delta like canonical Notch ligand 3 [Source:HGNC Symbol;Acc:HGNC:2909]
96. FZD10-AS1 1074 0.759 0.759 - FZD10 antisense RNA 1 (head to head)
97. LRP2 ENSG00000081479 1314 0.759 - 0.759 LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
98. SLITRK2 ENSG00000185985 905 0.758 0.758 - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
99. TMEM257 484 0.756 0.756 - transmembrane protein 257
100. CAMK2N2 ENSG00000163888 88 0.755 - 0.755 calcium/calmodulin dependent protein kinase II inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:24197]

There are 63 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA