Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZIC1

Gene Name Gene ID Reads Annotation
ZIC1 ENSG00000152977 18260 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]



Genes with expression patterns similar to ZIC1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. ZIC1 ENSG00000152977 18260 2 1.000 1.000 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
2. ZIC2 ENSG00000043355 4457 1.899 0.964 0.935 Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
3. ZIC4 ENSG00000174963 2667 1.878 0.947 0.931 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
4. SOX2 ENSG00000181449 19791 1.764 0.944 0.820 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
5. APCDD1 ENSG00000154856 2448 1.757 0.879 0.878 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
6. ZIC5 ENSG00000139800 441 1.75 0.878 0.872 Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
7. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.733 0.914 0.819 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
8. IGFBPL1 ENSG00000137142 3283 1.725 0.891 0.834 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
9. LINC00461 ENSG00000245526 4465 1.715 0.908 0.807 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
10. CKB ENSG00000166165 54181 1.689 0.904 0.785 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
11. HES6 ENSG00000144485 4284 1.689 0.878 0.811 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
12. GDF10 ENSG00000266524 711 1.677 0.816 0.861 growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
13. RND2 ENSG00000108830 3761 1.676 0.892 0.784 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
14. ZIC3 ENSG00000156925 420 1.659 0.806 0.853 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
15. POU3F2 ENSG00000184486 2683 1.659 0.890 0.769 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
16. CRABP1 ENSG00000166426 2178 1.656 0.854 0.802 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
17. MSI1 ENSG00000135097 6935 1.655 0.870 0.785 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
18. DTX4 ENSG00000110042 2639 1.649 0.889 0.760 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
19. FZD10 ENSG00000111432 608 1.638 0.794 0.844 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
20. CXCR4 ENSG00000121966 4708 1.635 0.792 0.843 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
21. RHBDL3 ENSG00000141314 2571 1.635 0.887 0.748 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
22. SOX1 ENSG00000182968 1339 1.634 0.850 0.784 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
23. TMEM158 ENSG00000249992 678 1.626 0.860 0.766 transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
24. NES ENSG00000132688 20034 1.614 0.821 0.793 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
25. LINC00925 LINC00925 517 1.613 0.875 0.738
26. SYT2 ENSG00000143858 2364 1.612 0.865 0.747 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
27. LOC100240734 1898 1.609 0.848 0.761 uncharacterized LOC100240734
28. HOXB-AS3 ENSG00000233101 1776 1.608 0.877 0.731 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
29. DLL1 ENSG00000198719, ENSG00000275555 1642 1.606 0.890 0.716 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
30. RFX4 ENSG00000111783 1382 1.604 0.878 0.726 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
31. MIAT ENSG00000225783 2977 1.593 0.854 0.739 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
32. LFNG ENSG00000106003 1260 1.592 0.810 0.782 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
33. ARL4A ENSG00000122644 3071 1.586 0.801 0.785 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
34. CELSR2 ENSG00000143126 3566 1.577 0.846 0.731 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
35. ASRGL1 ENSG00000162174 4293 1.575 0.828 0.747 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
36. GREB1 ENSG00000196208 4256 1.571 0.776 0.795 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
37. DCC ENSG00000187323 538 1.571 0.869 0.702 DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
38. PTPRZ1 ENSG00000106278 1326 1.568 0.818 0.750 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
39. RGS16 ENSG00000143333 2239 1.554 0.717 0.837 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
40. SYT11 ENSG00000132718 3832 1.551 0.758 0.793 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
41. DPYSL5 ENSG00000157851 6855 1.551 0.802 0.749 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
42. AXIN2 ENSG00000168646 2778 1.548 0.846 0.702 axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
43. WSCD1 ENSG00000179314 1121 1.539 0.806 0.733 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
44. TMEM132C ENSG00000181234 1913 1.53 0.726 0.804 transmembrane protein 132C [Source:HGNC Symbol;Acc:HGNC:25436]
45. SLC1A3 ENSG00000079215 1362 1.526 0.793 0.733 solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
46. PRDM13 ENSG00000112238 312 1.524 0.788 0.736 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
47. MIR124-2HG ENSG00000254377 940 1.521 0.725 0.796 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
48. METRN ENSG00000103260 1750 1.515 0.765 0.750 meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
49. FLJ12825 ENSG00000248265 822 1.514 0.782 0.732 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
50. NKD1 ENSG00000140807 2100 1.508 0.754 0.754 naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
51. HS6ST1 ENSG00000136720 4974 1.507 0.804 0.703 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
52. NOTCH1 ENSG00000148400 5516 1.497 0.791 0.706 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
53. MAP1B ENSG00000131711 44568 1.487 0.713 0.774 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
54. ADD2 ENSG00000075340 810 1.487 0.776 0.711 adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
55. FAM167A ENSG00000154319 299 1.484 0.777 0.707 family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]
56. WNT3A ENSG00000154342 267 1.482 0.748 0.734 Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
57. CECR2 ENSG00000099954 2223 1.481 0.703 0.778 CECR2, histone acetyl-lysine reader [Source:HGNC Symbol;Acc:HGNC:1840]
58. RASSF2 ENSG00000101265 1157 1.467 0.731 0.736 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
59. CCDC85C ENSG00000205476 3808 1.464 0.739 0.725 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
60. CHD7 ENSG00000171316 9450 1.463 0.704 0.759 chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20626]
61. OLIG3 ENSG00000177468 918 1.461 0.749 0.712 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
62. OLMALINC ENSG00000235823 4999 1.459 0.709 0.750 oligodendrocyte maturation-associated long intergenic non-coding RNA [Source:HGNC Symbol;Acc:HGNC:28060]
63. TUBB2B ENSG00000137285 35642 1.457 0.724 0.733 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
64. LAMC3 ENSG00000050555 1951 1.454 0.753 0.701 laminin subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:6494]
65. PAX3 ENSG00000135903 1126 1.439 0.729 0.710 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
66. MSX1 ENSG00000163132 2038 1.429 0.729 0.700 msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
67. SOX3 ENSG00000134595 5297 0.918 0.918 - SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
68. HOXB2 ENSG00000173917 6040 0.917 0.917 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
69. FAM181A ENSG00000140067, ENSG00000273533 1757 0.89 0.890 - family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
70. TOX3 ENSG00000103460 1758 0.883 0.883 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
71. ENPP2 ENSG00000136960 3320 0.882 0.882 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
72. NRARP ENSG00000198435 1658 0.881 0.881 - NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
73. FZD3 ENSG00000104290 11650 0.881 0.881 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
74. TSPAN18 ENSG00000157570 9391 0.874 0.874 - tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
75. HES5 ENSG00000197921, ENSG00000273529 9293 0.873 0.873 - hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
76. SRGAP3 ENSG00000196220 5297 0.858 0.858 - SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
77. SCUBE2 ENSG00000175356 1730 0.852 0.852 - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
78. RGMA ENSG00000182175 3405 0.846 0.846 - repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
79. TKTL1 ENSG00000007350 1212 0.841 0.841 - transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
80. SEMA5B ENSG00000082684 2716 0.838 0.838 - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
81. MYCL ENSG00000116990 1128 0.832 0.832 - MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
82. PAK3 ENSG00000077264 890 0.824 0.824 - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
83. JAM2 ENSG00000154721 1771 0.822 0.822 - junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
84. SLC2A1 ENSG00000117394 2892 0.821 0.821 - solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
85. PAX6 ENSG00000007372 3710 0.813 0.813 - paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
86. SLC1A2 ENSG00000110436 1231 0.813 0.813 - solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
87. TMEM257 484 0.811 0.811 - transmembrane protein 257
88. PDPN ENSG00000162493 5095 0.81 0.810 - podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
89. WNT7A ENSG00000154764 131 0.808 0.808 - Wnt family member 7A [Source:HGNC Symbol;Acc:HGNC:12786]
90. FGFR3 ENSG00000068078 2862 0.805 0.805 - fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
91. LRIG1 ENSG00000144749, ENSG00000282243 1639 0.803 0.803 - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
92. KIF21A ENSG00000139116 4975 0.801 0.801 - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
93. SLITRK2 ENSG00000185985 905 0.799 0.799 - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
94. TMEM47 ENSG00000147027 4552 0.796 0.796 - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
95. SALL1 ENSG00000103449 458 0.795 0.795 - spalt like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10524]
96. HOXC5 ENSG00000172789, ENSG00000273046 4001 0.794 0.794 - homeobox C5 [Source:NCBI gene;Acc:3222]
97. LRRN1 ENSG00000175928 3973 0.793 0.793 - leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:HGNC:20980]
98. MAP6 ENSG00000171533 1692 0.792 - 0.792 microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
99. SP5 ENSG00000204335 211 0.792 0.792 - Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
100. FAM159B 132 0.788 - 0.788 family with sequence similarity 159 member B

There are 69 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA