Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRGAP3

Gene Name Gene ID Reads Annotation
SRGAP3 ENSG00000196220 5297 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]



Genes with expression patterns similar to SRGAP3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SRGAP3 ENSG00000196220 5297 2 1.000 1.000 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
2. RHBDL3 ENSG00000141314 2571 1.833 0.903 0.930 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
3. CKB ENSG00000166165 54181 1.801 0.900 0.901 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
4. CELSR2 ENSG00000143126 3566 1.774 0.838 0.936 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
5. MIAT ENSG00000225783 2977 1.76 0.886 0.874 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
6. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.757 0.888 0.869 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
7. POU3F2 ENSG00000184486 2683 1.752 0.848 0.904 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
8. FAM181A ENSG00000140067, ENSG00000273533 1757 1.747 0.847 0.900 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
9. LINC00461 ENSG00000245526 4465 1.741 0.865 0.876 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
10. DPYSL5 ENSG00000157851 6855 1.74 0.822 0.918 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
11. HES5 ENSG00000197921, ENSG00000273529 9293 1.738 0.832 0.906 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
12. NES ENSG00000132688 20034 1.73 0.841 0.889 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
13. SOX2 ENSG00000181449 19791 1.725 0.845 0.880 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
14. SOX3 ENSG00000134595 5297 1.714 0.834 0.880 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
15. CXCR4 ENSG00000121966 4708 1.711 0.865 0.846 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
16. SYT11 ENSG00000132718 3832 1.709 0.841 0.868 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
17. DTX4 ENSG00000110042 2639 1.705 0.839 0.866 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
18. SEMA5B ENSG00000082684 2716 1.704 0.785 0.919 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
19. JAM2 ENSG00000154721 1771 1.7 0.862 0.838 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
20. RND2 ENSG00000108830 3761 1.693 0.830 0.863 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
21. IGFBPL1 ENSG00000137142 3283 1.688 0.858 0.830 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
22. MYCL ENSG00000116990 1128 1.683 0.786 0.897 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
23. MIR124-2HG ENSG00000254377 940 1.677 0.800 0.877 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
24. TSPAN18 ENSG00000157570 9391 1.676 0.809 0.867 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
25. HES6 ENSG00000144485 4284 1.673 0.876 0.797 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
26. LINC00925 LINC00925 517 1.669 0.819 0.850
27. ASRGL1 ENSG00000162174 4293 1.669 0.789 0.880 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
28. MAP1B ENSG00000131711 44568 1.668 0.843 0.825 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
29. NRARP ENSG00000198435 1658 1.661 0.777 0.884 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
30. CDH4 ENSG00000179242, ENSG00000280641 1069 1.66 0.823 0.837 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
31. KLHDC8A ENSG00000162873 2265 1.654 0.782 0.872 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
32. HOXB-AS3 ENSG00000233101 1776 1.651 0.792 0.859 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
33. RGS16 ENSG00000143333 2239 1.649 0.843 0.806 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
34. CSPG5 ENSG00000114646 558 1.648 0.749 0.899 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
35. AGO1 ENSG00000092847 2525 1.645 0.861 0.784 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
36. PDPN ENSG00000162493 5095 1.644 0.768 0.876 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
37. RGMA ENSG00000182175 3405 1.642 0.783 0.859 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
38. SYT2 ENSG00000143858 2364 1.639 0.801 0.838 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
39. LINC01158 1332 1.632 0.740 0.892 long intergenic non-protein coding RNA 1158, transcript variant 4
40. LRIG1 ENSG00000144749, ENSG00000282243 1639 1.63 0.786 0.844 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
41. FGFR3 ENSG00000068078 2862 1.627 0.795 0.832 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
42. LOC100240734 1898 1.618 0.729 0.889 uncharacterized LOC100240734
43. DLL1 ENSG00000198719, ENSG00000275555 1642 1.616 0.841 0.775 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
44. CCDC85C ENSG00000205476 3808 1.611 0.747 0.864 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
45. FLJ12825 ENSG00000248265 822 1.608 0.805 0.803 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
46. TUBB2B ENSG00000137285 35642 1.598 0.820 0.778 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
47. CRABP1 ENSG00000166426 2178 1.59 0.789 0.801 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
48. SLC1A2 ENSG00000110436 1231 1.587 0.732 0.855 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
49. SLC2A1 ENSG00000117394 2892 1.579 0.767 0.812 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
50. GREB1 ENSG00000196208 4256 1.575 0.765 0.810 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
51. NOVA1 ENSG00000139910 5990 1.574 0.722 0.852 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
52. SOX1 ENSG00000182968 1339 1.572 0.775 0.797 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
53. MSI1 ENSG00000135097 6935 1.571 0.744 0.827 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
54. TAGLN3 ENSG00000144834 10185 1.569 0.823 0.746 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
55. NOTCH1 ENSG00000148400 5516 1.563 0.762 0.801 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
56. PAK3 ENSG00000077264 890 1.561 0.822 0.739 p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
57. TMEM176B ENSG00000106565 1876 1.561 0.746 0.815 transmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]
58. RASSF2 ENSG00000101265 1157 1.56 0.760 0.800 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
59. HOXC9 ENSG00000180806 3191 1.548 0.701 0.847 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]
60. LFNG ENSG00000106003 1260 1.547 0.702 0.845 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
61. ST18 ENSG00000147488 547 1.541 0.732 0.809 ST18, C2H2C-type zinc finger [Source:HGNC Symbol;Acc:HGNC:18695]
62. FAM219A ENSG00000164970 1747 1.538 0.770 0.768 family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
63. PRR36 ENSG00000183248 485 1.534 0.729 0.805 proline rich 36 [Source:HGNC Symbol;Acc:HGNC:26172]
64. MAP6 ENSG00000171533 1692 1.529 0.718 0.811 microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
65. HS6ST1 ENSG00000136720 4974 1.528 0.746 0.782 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
66. SLITRK2 ENSG00000185985 905 1.527 0.776 0.751 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
67. NHLH2 ENSG00000177551 1191 1.522 0.704 0.818 nescient helix-loop-helix 2 [Source:HGNC Symbol;Acc:HGNC:7818]
68. ADD2 ENSG00000075340 810 1.521 0.729 0.792 adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
69. TMEM158 ENSG00000249992 678 1.521 0.811 0.710 transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
70. SCUBE2 ENSG00000175356 1730 1.516 0.728 0.788 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
71. ARL4A ENSG00000122644 3071 1.516 0.755 0.761 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
72. RNF165 ENSG00000141622 1865 1.509 0.761 0.748 ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
73. TOX3 ENSG00000103460 1758 1.507 0.790 0.717 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
74. WSCD1 ENSG00000179314 1121 1.503 0.729 0.774 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
75. CNTN2 ENSG00000184144 4674 1.502 0.714 0.788 contactin 2 [Source:HGNC Symbol;Acc:HGNC:2172]
76. TKTL1 ENSG00000007350 1212 1.501 0.724 0.777 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
77. B3GAT1 ENSG00000109956 652 1.499 0.704 0.795 beta-1,3-glucuronyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:921]
78. ADGRG1 ENSG00000205336 800 1.495 0.753 0.742 adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
79. DPYSL2 ENSG00000092964 47074 1.493 0.721 0.772 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
80. DPYSL3 ENSG00000113657 7319 1.49 0.710 0.780 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
81. FMN2 ENSG00000155816 1062 1.483 0.766 0.717 formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
82. CAMKV ENSG00000164076 400 1.481 0.702 0.779 CaM kinase like vesicle associated [Source:HGNC Symbol;Acc:HGNC:28788]
83. CNIH2 ENSG00000174871 3037 1.472 0.759 0.713 cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]
84. CALCB ENSG00000175868 1967 1.461 0.748 0.713 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]
85. CPLX2 ENSG00000145920 573 1.46 0.721 0.739 complexin 2 [Source:HGNC Symbol;Acc:HGNC:2310]
86. CRNDE ENSG00000245694 3754 1.452 0.723 0.729 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
87. CALM1 ENSG00000198668 24434 1.442 0.730 0.712 calmodulin 1 [Source:HGNC Symbol;Acc:HGNC:1442]
88. TUBA1A ENSG00000167552 83799 1.438 0.734 0.704 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
89. OLFM1 ENSG00000130558 1162 1.428 0.726 0.702 olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]
90. RGS20 ENSG00000147509 282 0.877 - 0.877 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
91. FZD3 ENSG00000104290 11650 0.876 0.876 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
92. PAX6 ENSG00000007372 3710 0.864 - 0.864 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
93. PTPRZ1 ENSG00000106278 1326 0.861 - 0.861 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
94. ZIC1 ENSG00000152977 18260 0.858 0.858 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
95. IRX5 ENSG00000176842 2175 0.85 - 0.850 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
96. NRIP3 ENSG00000175352 238 0.847 - 0.847 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
97. TMEM257 484 0.846 0.846 - transmembrane protein 257
98. ZIC4 ENSG00000174963 2667 0.839 0.839 - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
99. ROBO3 ENSG00000154134 1085 0.837 - 0.837 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
100. CTNND2 ENSG00000169862 1640 0.837 0.837 - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]

There are 136 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA