Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOX2

Gene Name Gene ID Reads Annotation
SOX2 ENSG00000181449 19791 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]



Genes with expression patterns similar to SOX2

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SOX2 ENSG00000181449 19791 2 1.000 1.000 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
2. LINC00461 ENSG00000245526 4465 1.926 0.963 0.963 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
3. HOXB-AS3 ENSG00000233101 1776 1.888 0.938 0.950 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
4. POU3F2 ENSG00000184486 2683 1.877 0.923 0.954 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
5. CKB ENSG00000166165 54181 1.875 0.924 0.951 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
6. RND2 ENSG00000108830 3761 1.872 0.935 0.937 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
7. RHBDL3 ENSG00000141314 2571 1.871 0.910 0.961 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
8. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.861 0.911 0.950 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
9. SOX1 ENSG00000182968 1339 1.84 0.893 0.947 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
10. LOC100240734 1898 1.836 0.890 0.946 uncharacterized LOC100240734
11. CRABP1 ENSG00000166426 2178 1.824 0.939 0.885 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
12. DTX4 ENSG00000110042 2639 1.821 0.889 0.932 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
13. IGFBPL1 ENSG00000137142 3283 1.813 0.915 0.898 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
14. HES5 ENSG00000197921, ENSG00000273529 9293 1.812 0.926 0.886 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
15. SYT2 ENSG00000143858 2364 1.809 0.871 0.938 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
16. SCUBE2 ENSG00000175356 1730 1.807 0.893 0.914 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
17. HES6 ENSG00000144485 4284 1.801 0.935 0.866 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
18. ZIC4 ENSG00000174963 2667 1.796 0.950 0.846 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
19. SOX3 ENSG00000134595 5297 1.791 0.923 0.868 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
20. DLL1 ENSG00000198719, ENSG00000275555 1642 1.79 0.927 0.863 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
21. ARL4A ENSG00000122644 3071 1.782 0.863 0.919 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
22. WSCD1 ENSG00000179314 1121 1.778 0.871 0.907 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
23. TKTL1 ENSG00000007350 1212 1.777 0.900 0.877 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
24. NRARP ENSG00000198435 1658 1.772 0.892 0.880 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
25. ZIC1 ENSG00000152977 18260 1.764 0.944 0.820 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
26. MSI1 ENSG00000135097 6935 1.762 0.883 0.879 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
27. TOX3 ENSG00000103460 1758 1.756 0.921 0.835 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
28. SEMA5B ENSG00000082684 2716 1.754 0.851 0.903 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
29. PDPN ENSG00000162493 5095 1.754 0.874 0.880 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
30. ASRGL1 ENSG00000162174 4293 1.744 0.842 0.902 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
31. FAM181A ENSG00000140067, ENSG00000273533 1757 1.744 0.917 0.827 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
32. MIAT ENSG00000225783 2977 1.742 0.871 0.871 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
33. CELSR2 ENSG00000143126 3566 1.736 0.815 0.921 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
34. SLC2A1 ENSG00000117394 2892 1.735 0.894 0.841 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
35. SLC1A2 ENSG00000110436 1231 1.729 0.871 0.858 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
36. SRGAP3 ENSG00000196220 5297 1.725 0.845 0.880 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
37. TSPAN18 ENSG00000157570 9391 1.725 0.877 0.848 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
38. LFNG ENSG00000106003 1260 1.724 0.813 0.911 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
39. HS6ST1 ENSG00000136720 4974 1.722 0.843 0.879 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
40. PTPRZ1 ENSG00000106278 1326 1.719 0.788 0.931 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
41. CSPG5 ENSG00000114646 558 1.708 0.835 0.873 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
42. RFX4 ENSG00000111783 1382 1.708 0.866 0.842 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
43. FZD10 ENSG00000111432 608 1.704 0.838 0.866 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
44. ZIC3 ENSG00000156925 420 1.703 0.884 0.819 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
45. ZIC2 ENSG00000043355 4457 1.703 0.951 0.752 Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
46. PRDM13 ENSG00000112238 312 1.7 0.835 0.865 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
47. MYCL ENSG00000116990 1128 1.696 0.823 0.873 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
48. NOTCH1 ENSG00000148400 5516 1.695 0.832 0.863 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
49. DPYSL5 ENSG00000157851 6855 1.692 0.821 0.871 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
50. FLJ12825 ENSG00000248265 822 1.688 0.805 0.883 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
51. LINC00925 LINC00925 517 1.68 0.852 0.828
52. RASSF2 ENSG00000101265 1157 1.677 0.814 0.863 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
53. FGFR3 ENSG00000068078 2862 1.673 0.834 0.839 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
54. NES ENSG00000132688 20034 1.669 0.794 0.875 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
55. ZIC5 ENSG00000139800 441 1.667 0.926 0.741 Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
56. ZBTB16 ENSG00000109906 287 1.667 0.834 0.833 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
57. MIR124-2HG ENSG00000254377 940 1.661 0.744 0.917 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
58. CCDC85C ENSG00000205476 3808 1.655 0.766 0.889 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
59. SYT11 ENSG00000132718 3832 1.653 0.787 0.866 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
60. JAM2 ENSG00000154721 1771 1.652 0.817 0.835 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
61. ENPP2 ENSG00000136960 3320 1.65 0.881 0.769 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
62. RGS20 ENSG00000147509 282 1.65 0.790 0.860 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
63. APCDD1 ENSG00000154856 2448 1.646 0.887 0.759 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
64. PAX3 ENSG00000135903 1126 1.642 0.786 0.856 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
65. CXCR4 ENSG00000121966 4708 1.64 0.768 0.872 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
66. LRIG1 ENSG00000144749, ENSG00000282243 1639 1.634 0.799 0.835 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
67. FZD3 ENSG00000104290 11650 1.633 0.896 0.737 frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
68. PAX6 ENSG00000007372 3710 1.631 0.850 0.781 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
69. GREB1 ENSG00000196208 4256 1.63 0.813 0.817 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
70. CRNDE ENSG00000245694 3754 1.625 0.797 0.828 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
71. GLDC ENSG00000178445 513 1.613 0.758 0.855 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
72. LINC01158 1332 1.612 0.776 0.836 long intergenic non-protein coding RNA 1158, transcript variant 4
73. PAK3 ENSG00000077264 890 1.607 0.837 0.770 p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
74. AGO1 ENSG00000092847 2525 1.6 0.807 0.793 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
75. CDH4 ENSG00000179242, ENSG00000280641 1069 1.599 0.756 0.843 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
76. CTNND2 ENSG00000169862 1640 1.598 0.847 0.751 catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
77. RGMA ENSG00000182175 3405 1.592 0.816 0.776 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
78. DCC ENSG00000187323 538 1.588 0.870 0.718 DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
79. KLHDC8A ENSG00000162873 2265 1.573 0.788 0.785 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
80. TMEM158 ENSG00000249992 678 1.572 0.846 0.726 transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
81. PCDH8 ENSG00000136099 203 1.557 0.724 0.833 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
82. SLITRK2 ENSG00000185985 905 1.555 0.829 0.726 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
83. HOXB9 ENSG00000170689 2051 1.549 0.702 0.847 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
84. FAM167A ENSG00000154319 299 1.544 0.796 0.748 family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]
85. NRIP3 ENSG00000175352 238 1.541 0.739 0.802 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
86. FGF19 ENSG00000162344 241 1.54 0.743 0.797 fibroblast growth factor 19 [Source:HGNC Symbol;Acc:HGNC:3675]
87. CHD7 ENSG00000171316 9450 1.536 0.729 0.807 chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20626]
88. SOX21 ENSG00000125285 209 1.53 0.746 0.784 SRY-box 21 [Source:HGNC Symbol;Acc:HGNC:11197]
89. ADD2 ENSG00000075340 810 1.517 0.775 0.742 adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
90. SP5 ENSG00000204335 211 1.51 0.807 0.703 Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
91. NKD1 ENSG00000140807 2100 1.509 0.748 0.761 naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
92. METRN ENSG00000103260 1750 1.505 0.720 0.785 meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
93. DCLK2 ENSG00000170390 3503 1.497 0.775 0.722 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
94. CNIH2 ENSG00000174871 3037 1.475 0.753 0.722 cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]
95. RNF165 ENSG00000141622 1865 1.469 0.753 0.716 ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
96. HES4 ENSG00000188290 745 1.456 0.717 0.739 hes family bHLH transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:24149]
97. B3GAT1 ENSG00000109956 652 1.454 0.725 0.729 beta-1,3-glucuronyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:921]
98. MSX1 ENSG00000163132 2038 1.441 0.732 0.709 msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
99. NR6A1 ENSG00000148200 1390 1.434 0.710 0.724 nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]
100. TMEM132C ENSG00000181234 1913 1.427 0.711 0.716 transmembrane protein 132C [Source:HGNC Symbol;Acc:HGNC:25436]

There are 152 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA