Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRDM13

Gene Name Gene ID Reads Annotation
PRDM13 ENSG00000112238 312 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]



Genes with expression patterns similar to PRDM13

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. PRDM13 ENSG00000112238 312 2 1.000 1.000 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
2. SCUBE2 ENSG00000175356 1730 1.836 0.952 0.884 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
3. SOX1 ENSG00000182968 1339 1.81 0.899 0.911 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
4. FZD10 ENSG00000111432 608 1.799 0.908 0.891 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
5. ARL4A ENSG00000122644 3071 1.765 0.864 0.901 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
6. SYT2 ENSG00000143858 2364 1.761 0.882 0.879 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
7. TKTL1 ENSG00000007350 1212 1.73 0.887 0.843 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
8. PAX3 ENSG00000135903 1126 1.721 0.822 0.899 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
9. SOX2 ENSG00000181449 19791 1.7 0.835 0.865 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
10. ZIC3 ENSG00000156925 420 1.694 0.880 0.814 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
11. WSCD1 ENSG00000179314 1121 1.694 0.819 0.875 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
12. LINC00461 ENSG00000245526 4465 1.676 0.844 0.832 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
13. HOXB-AS3 ENSG00000233101 1776 1.659 0.859 0.800 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
14. POU3F2 ENSG00000184486 2683 1.645 0.819 0.826 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
15. OLIG3 ENSG00000177468 918 1.644 0.892 0.752 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
16. AXIN2 ENSG00000168646 2778 1.642 0.883 0.759 axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
17. MSX1 ENSG00000163132 2038 1.642 0.833 0.809 msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
18. FAM167A ENSG00000154319 299 1.64 0.830 0.810 family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]
19. CRABP1 ENSG00000166426 2178 1.631 0.817 0.814 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
20. ZIC4 ENSG00000174963 2667 1.619 0.824 0.795 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
21. RND2 ENSG00000108830 3761 1.61 0.789 0.821 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
22. CCDC140 ENSG00000163081 233 1.601 0.725 0.876 coiled-coil domain containing 140 [Source:HGNC Symbol;Acc:HGNC:26514]
23. CRNDE ENSG00000245694 3754 1.598 0.812 0.786 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
24. SLC1A2 ENSG00000110436 1231 1.598 0.847 0.751 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
25. SLC2A1 ENSG00000117394 2892 1.592 0.826 0.766 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
26. HES5 ENSG00000197921, ENSG00000273529 9293 1.588 0.865 0.723 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
27. DLL1 ENSG00000198719, ENSG00000275555 1642 1.579 0.808 0.771 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
28. WNT3A ENSG00000154342 267 1.579 0.823 0.756 Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
29. TOX3 ENSG00000103460 1758 1.572 0.811 0.761 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
30. NKD1 ENSG00000140807 2100 1.571 0.817 0.754 naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
31. DCC ENSG00000187323 538 1.566 0.714 0.852 DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
32. SP5 ENSG00000204335 211 1.565 0.744 0.821 Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
33. NEDD9 ENSG00000111859 1509 1.559 0.787 0.772 neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
34. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.555 0.716 0.839 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
35. RHBDL3 ENSG00000141314 2571 1.553 0.756 0.797 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
36. LOC100240734 1898 1.551 0.756 0.795 uncharacterized LOC100240734
37. ZBTB16 ENSG00000109906 287 1.529 0.731 0.798 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
38. ZIC1 ENSG00000152977 18260 1.524 0.788 0.736 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
39. MSI1 ENSG00000135097 6935 1.523 0.785 0.738 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
40. LFNG ENSG00000106003 1260 1.523 0.749 0.774 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
41. CKB ENSG00000166165 54181 1.521 0.728 0.793 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
42. PDPN ENSG00000162493 5095 1.51 0.771 0.739 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
43. APCDD1 ENSG00000154856 2448 1.5 0.796 0.704 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
44. IGFBPL1 ENSG00000137142 3283 1.496 0.706 0.790 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
45. FGFR3 ENSG00000068078 2862 1.495 0.787 0.708 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
46. NRARP ENSG00000198435 1658 1.495 0.771 0.724 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
47. ROBO3 ENSG00000154134 1085 1.469 0.743 0.726 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
48. SEMA5B ENSG00000082684 2716 1.461 0.725 0.736 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
49. SOX3 ENSG00000134595 5297 1.425 0.722 0.703 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
50. DCLK2 ENSG00000170390 3503 1.413 0.713 0.700 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
51. GBX2 ENSG00000168505 227 0.898 - 0.898 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
52. FAM159B 132 0.893 - 0.893 family with sequence similarity 159 member B
53. KCNK10 ENSG00000100433 145 0.87 - 0.870 potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
54. HS6ST1 ENSG00000136720 4974 0.858 - 0.858 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
55. NCKAP5 ENSG00000176771 481 0.855 - 0.855 NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]
56. CCDC85C ENSG00000205476 3808 0.847 - 0.847 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
57. LRP2 ENSG00000081479 1314 0.843 - 0.843 LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
58. OTP ENSG00000171540 179 0.843 0.843 - orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
59. GDF10 ENSG00000266524 711 0.834 0.834 - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
60. DTX4 ENSG00000110042 2639 0.833 - 0.833 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
61. RASSF2 ENSG00000101265 1157 0.829 - 0.829 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
62. BTG3 ENSG00000154640, ENSG00000281484 4437 0.824 - 0.824 BTG anti-proliferation factor 3 [Source:HGNC Symbol;Acc:HGNC:1132]
63. ZIC5 ENSG00000139800 441 0.82 0.820 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
64. PTPRZ1 ENSG00000106278 1326 0.82 - 0.820 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
65. MIR124-2HG ENSG00000254377 940 0.812 - 0.812 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
66. NRIP3 ENSG00000175352 238 0.8 0.800 - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
67. NOTCH1 ENSG00000148400 5516 0.799 - 0.799 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
68. RGS20 ENSG00000147509 282 0.797 0.797 - regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
69. CCND1 ENSG00000110092 8014 0.796 0.796 - cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
70. PLEKHG1 ENSG00000120278 1008 0.793 - 0.793 pleckstrin homology and RhoGEF domain containing G1 [Source:HGNC Symbol;Acc:HGNC:20884]
71. TOX ENSG00000198846 1208 0.791 0.791 - thymocyte selection associated high mobility group box [Source:HGNC Symbol;Acc:HGNC:18988]
72. ZIC2 ENSG00000043355 4457 0.789 0.789 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
73. PTN ENSG00000105894 11178 0.786 0.786 - pleiotrophin [Source:HGNC Symbol;Acc:HGNC:9630]
74. GLDC ENSG00000178445 513 0.785 - 0.785 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
75. NPAS3 ENSG00000151322 1043 0.785 - 0.785 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
76. WASF3 ENSG00000132970 6777 0.784 0.784 - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
77. TMEM257 484 0.779 0.779 - transmembrane protein 257
78. FAM107A ENSG00000168309 211 0.778 - 0.778 family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]
79. PCDH8 ENSG00000136099 203 0.777 0.777 - protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
80. PAX7 ENSG00000009709 810 0.776 - 0.776 paired box 7 [Source:HGNC Symbol;Acc:HGNC:8621]
81. ARL4C ENSG00000188042 5437 0.776 - 0.776 ADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]
82. KIAA1147 ENSG00000257093, ENSG00000262599 2599 0.776 0.776 - KIAA1147 [Source:HGNC Symbol;Acc:HGNC:29472]
83. C9orf135 ENSG00000204711 56 0.776 - 0.776 chromosome 9 open reading frame 135 [Source:HGNC Symbol;Acc:HGNC:31422]
84. HOXC5 ENSG00000172789, ENSG00000273046 4001 0.774 0.774 - homeobox C5 [Source:NCBI gene;Acc:3222]
85. RGS16 ENSG00000143333 2239 0.771 - 0.771 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
86. ASRGL1 ENSG00000162174 4293 0.771 - 0.771 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
87. HOXB9 ENSG00000170689 2051 0.768 - 0.768 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
88. RFX4 ENSG00000111783 1382 0.762 0.762 - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
89. PAX6 ENSG00000007372 3710 0.761 0.761 - paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
90. CECR2 ENSG00000099954 2223 0.761 - 0.761 CECR2, histone acetyl-lysine reader [Source:HGNC Symbol;Acc:HGNC:1840]
91. MLPH ENSG00000115648 37 0.76 0.760 - melanophilin [Source:HGNC Symbol;Acc:HGNC:29643]
92. SLC10A2 ENSG00000125255 30 0.757 - 0.757 solute carrier family 10 member 2 [Source:HGNC Symbol;Acc:HGNC:10906]
93. SLITRK2 ENSG00000185985 905 0.757 0.757 - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
94. IRX5 ENSG00000176842 2175 0.757 - 0.757 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
95. FZD10-AS1 1074 0.755 0.755 - FZD10 antisense RNA 1 (head to head)
96. CSPG5 ENSG00000114646 558 0.754 0.754 - chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
97. DKK3 ENSG00000050165 1618 0.754 - 0.754 dickkopf WNT signaling pathway inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:2893]
98. HES6 ENSG00000144485 4284 0.752 - 0.752 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
99. CELSR2 ENSG00000143126 3566 0.752 - 0.752 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
100. CELSR1 ENSG00000075275 716 0.751 - 0.751 cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA