Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_posterior_slice_1, section s32.

Sample reads: 124,236. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 7614.04 61290.88
2. MT-ATP6 MT-ATP6 1539.61 12393.43
3. EEF1A EEF1A 1251.12 10071.16
4. RPS3A ENSGALG00000010077 1057.79 8514.91 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 988.96 7960.85 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. ENSGALG00000018384 ENSGALG00000018384 943.40 7594.10
7. RPS10 ENSGALG00000002813 908.99 7317.11 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. ANXA1 ENSGALG00000015148 816.87 6575.57 annexin A1 [Source:NCBI gene;Acc:404271]
9. RPLP1 ENSGALG00000030878 799.67 6437.12 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
10. MT-CO1 MT-CO1 680.22 5475.58
11. RPS23 ENSGALG00000015617 663.02 5337.12 ribosomal protein S23
12. RPS8 ENSGALG00000010124 654.92 5271.92 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
13. GAPDH ENSGALG00000014442 649.86 5231.19 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. RPL8 ENSGALG00000016232 644.79 5190.38 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
15. ENSGALG00000018386 ENSGALG00000018386 624.55 5027.45
16. MT-ND5 MT-ND5 604.31 4864.53
17. TXN ENSGALG00000015704 556.73 4481.52 thioredoxin [Source:NCBI gene;Acc:396437]
18. RPL4 ENSGALG00000007711 548.63 4416.32 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
19. MT-ND4 MT-ND4 545.60 4391.93
20. RPLP0 ENSGALG00000023294 535.47 4310.38 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
21. RPL7A ENSGALG00000003197 521.30 4196.32 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
22. MT-CYB MT-CYB 506.12 4074.12
23. gga-mir-3533 ENSGALG00000027736 496.00 3992.66 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
24. RPL19 ENSGALG00000001658 477.78 3845.99 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
25. RPS12 ENSGALG00000013990 464.62 3740.06 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
26. RPS4 RPS4 443.36 3568.92
27. RPL27A ENSGALG00000005948 434.25 3495.59 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
28. RAN ENSGALG00000002569 433.24 3487.46 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
29. RPL15 ENSGALG00000011290 422.10 3397.79 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
30. RPS6 ENSGALG00000015082 421.09 3389.66 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
31. gga-mir-3527 gga-mir-3527 420.08 3381.53
32. RPL23A ENSGALG00000003966 418.05 3365.18 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
33. RPL6 ENSGALG00000004818 410.97 3308.19 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
34. ENSGALG00000002696 ENSGALG00000002696 404.89 3259.25
35. RPL27 ENSGALG00000002837 403.88 3251.12 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
36. MDK ENSGALG00000008367 383.64 3088.19 midkine [Source:NCBI gene;Acc:423196]
37. RPL26 RPL26 375.54 3022.99
38. RPL38 ENSGALG00000001465 374.53 3014.86 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
39. RPSA 370.48 2982.26 ribosomal protein SA
40. GAL10 GAL10 369.47 2974.13
41. RPL32 ENSGALG00000027142 369.47 2974.13 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
42. RPL29 ENSGALG00000026978 364.41 2933.40 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
43. RPL21 ENSGALG00000027035 360.36 2900.80 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
44. TMSB4X ENSGALG00000026383 355.30 2860.06 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
45. RPS28 ENSGALG00000024398 354.28 2851.85 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
46. RPS21 ENSGALG00000005338 352.26 2835.59 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
47. MT-ND3 MT-ND3 350.23 2819.25
48. RPL13 ENSGALG00000006179 342.14 2754.13 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
49. RPS15 ENSGALG00000015195 336.06 2705.19 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
50. RPL5 ENSGALG00000005922 329.99 2656.33 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
51. PHB2 ENSGALG00000014567 319.87 2574.86 prohibitin 2 [Source:NCBI gene;Acc:771124]
52. RPL36AL ENSGALG00000004952 318.85 2566.65 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
53. RPL12 ENSGALG00000008806 313.79 2525.92 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
54. SNRPD1 ENSGALG00000041334 310.76 2501.53 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
55. RPS29 ENSGALG00000012229 308.73 2485.19 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
56. RPS14 ENSGALG00000004588 301.65 2428.20 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
57. RPL37 ENSGALG00000014833 292.54 2354.86 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
58. RPS15A ENSGALG00000006771 289.50 2330.39 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
59. RPL14 ENSGALG00000043379 288.49 2322.26 ribosomal protein L14
60. RPL23 ENSGALG00000001634 287.48 2314.13 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
61. CRHOA CRHOA 280.39 2257.06
62. RPS7 ENSGALG00000016392 277.35 2232.59 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
63. CIRBP ENSGALG00000030918 272.29 2191.86 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
64. PPIA ENSGALG00000028600 272.29 2191.86 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
65. RPS16 ENSGALG00000026490 269.25 2167.39 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
66. ENO1 ENSGALG00000002377 268.24 2159.26 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
67. RPS25 ENSGALG00000007699 265.21 2134.87 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
68. RPL35 ENSGALG00000035677 260.14 2094.05 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
69. UBB ENSGALG00000004509 260.14 2094.05 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
70. RPS3 ENSGALG00000017330 259.13 2085.92 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
71. RPLP2 ENSGALG00000034811 258.12 2077.79 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
72. TCEB3 ENSGALG00000034625 256.10 2061.53 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
73. RPS2 ENSGALG00000005490 255.08 2053.32 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
74. ATP5G3 252.05 2028.93 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
75. MT-ND1 MT-ND1 246.99 1988.20
76. ENSGALG00000028649 ENSGALG00000028649 242.94 1955.60
77. RPL18A 234.84 1890.40 ribosomal protein L18a
78. ENSGALG00000028992 ENSGALG00000028992 233.83 1882.27
79. HMGB2 ENSGALG00000010745 232.81 1874.05 high mobility group box 2 [Source:NCBI gene;Acc:396482]
80. H3-IX H3-IX 227.75 1833.32
81. HSPA8 ENSGALG00000006512 226.74 1825.19 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
82. STMN1 ENSGALG00000001475 225.73 1817.06 stathmin 1 [Source:NCBI gene;Acc:396057]
83. HMGN2 HMGN2 219.66 1768.20
84. RPL7 ENSGALG00000035252 219.66 1768.20 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
85. RPS11 ENSGALG00000017299 219.66 1768.20 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
86. ALDH1A2 ENSGALG00000004270 217.63 1751.86 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
87. HMGN5 ENSGALG00000007131 217.63 1751.86 high mobility group nucleosome binding domain 5, transcript variant X1
88. ANP32B ENSGALG00000037483 211.56 1703.00 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
89. EEF1D 208.52 1678.53 eukaryotic translation elongation factor 1 delta, transcript variant X13
90. HBZ ENSGALG00000023740 208.52 1678.53 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
91. RPS20 ENSGALG00000014432 205.48 1654.06 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
92. RPS13 ENSGALG00000006096 204.47 1645.93 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
93. DYL1 ENSGALG00000007153 203.46 1637.80 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
94. NUCKS1 ENSGALG00000000708 200.42 1613.32 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
95. MT-ND6 MT-ND6 199.41 1605.19
96. RPS24 ENSGALG00000004871 196.37 1580.72 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
97. EIF4G2 ENSGALG00000005587 194.35 1564.46 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
98. FTH FTH 194.35 1564.46
99. GNB2L1 ENSGALG00000000122 193.34 1556.33 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
100. SET ENSGALG00000004701 191.31 1539.99 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA