Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E4_posterior_slice_1, section s17.

Sample reads: 124,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 7563.09 60876.49
2. EEF1A EEF1A 1465.22 11793.78
3. MT-ATP6 MT-ATP6 1156.16 9306.11
4. RPS3A ENSGALG00000010077 1018.45 8197.66 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
5. RPLP1 ENSGALG00000030878 842.30 6779.80 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
6. TMSB4X ENSGALG00000026383 839.10 6754.05 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 835.90 6728.29 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS10 ENSGALG00000002813 821.48 6612.22 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. ENSGALG00000018384 ENSGALG00000018384 811.88 6534.95
10. RPS23 ENSGALG00000015617 714.19 5748.63 ribosomal protein S23
11. MT-CO1 MT-CO1 627.72 5052.62
12. ENSGALG00000018386 ENSGALG00000018386 594.09 4781.92
13. RPS8 ENSGALG00000010124 592.49 4769.04 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. MT-CYB MT-CYB 536.45 4317.97
15. RPL7A ENSGALG00000003197 536.45 4317.97 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
16. RAN ENSGALG00000002569 514.03 4137.51 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
17. RPL4 ENSGALG00000007711 507.62 4085.91 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
18. RPL8 ENSGALG00000016232 506.02 4073.03 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
19. RPLP0 ENSGALG00000023294 485.20 3905.45 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
20. MT-ND5 MT-ND5 461.18 3712.11
21. ENSGALG00000002696 ENSGALG00000002696 459.58 3699.23
22. RPL27A ENSGALG00000005948 456.38 3673.47 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
23. RPL6 ENSGALG00000004818 453.18 3647.72 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
24. RPL26 RPL26 451.58 3634.84
25. RPS12 ENSGALG00000013990 432.36 3480.13 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
26. gga-mir-3533 ENSGALG00000027736 427.56 3441.50 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
27. RPS4 RPS4 424.35 3415.66
28. MT-ND4 MT-ND4 422.75 3402.78
29. RPS6 ENSGALG00000015082 417.95 3364.14 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
30. RPS28 ENSGALG00000024398 409.94 3299.67 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
31. HMGB2 ENSGALG00000010745 406.74 3273.91 high mobility group box 2 [Source:NCBI gene;Acc:396482]
32. RPS21 ENSGALG00000005338 403.54 3248.16 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
33. RPL27 ENSGALG00000002837 400.33 3222.32 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
34. RPL13 ENSGALG00000006179 392.33 3157.93 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
35. RPL23A ENSGALG00000003966 392.33 3157.93 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
36. RPS15 ENSGALG00000015195 390.72 3144.97 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
37. GAPDH ENSGALG00000014442 384.32 3093.45 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
38. TXN ENSGALG00000015704 379.52 3054.82 thioredoxin [Source:NCBI gene;Acc:396437]
39. RPL19 ENSGALG00000001658 371.51 2990.34 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
40. MT-ND3 MT-ND3 361.90 2912.99
41. RPL5 ENSGALG00000005922 361.90 2912.99 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
42. RPL21 ENSGALG00000027035 358.70 2887.23 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
43. RPS15A ENSGALG00000006771 358.70 2887.23 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
44. RPS14 ENSGALG00000004588 353.89 2848.52 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
45. RPL36AL ENSGALG00000004952 352.29 2835.64 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
46. RPL32 ENSGALG00000027142 342.68 2758.28 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
47. RPL12 ENSGALG00000008806 339.48 2732.53 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
48. RPL15 ENSGALG00000011290 339.48 2732.53 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
49. OSF-2 OSF-2 334.68 2693.89
50. CRHOA CRHOA 305.85 2461.83
51. RPL29 ENSGALG00000026978 305.85 2461.83 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
52. HMGN5 ENSGALG00000007131 301.05 2423.20 high mobility group nucleosome binding domain 5, transcript variant X1
53. PHB2 ENSGALG00000014567 294.65 2371.68 prohibitin 2 [Source:NCBI gene;Acc:771124]
54. LECT1 LECT1 293.04 2358.72
55. RPSA 288.24 2320.09 ribosomal protein SA
56. RPL18A 281.83 2268.49 ribosomal protein L18a
57. AKAP12 ENSGALG00000036240 277.03 2229.86 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
58. RPS16 ENSGALG00000026490 277.03 2229.86 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
59. MDK ENSGALG00000008367 273.83 2204.10 midkine [Source:NCBI gene;Acc:423196]
60. RPS29 ENSGALG00000012229 272.23 2191.22 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
61. RPL37 ENSGALG00000014833 270.63 2178.34 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
62. HSP90B1 ENSGALG00000033789 262.62 2113.87 heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
63. RPL14 ENSGALG00000043379 261.02 2100.99 ribosomal protein L14
64. SNRPD1 ENSGALG00000041334 256.21 2062.27 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
65. HSP90AA1 ENSGALG00000033212 251.41 2023.64 heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
66. CIRBP ENSGALG00000030918 249.81 2010.76 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
67. PSMC6 ENSGALG00000012408 248.21 1997.88 proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
68. TCEB3 ENSGALG00000034625 248.21 1997.88 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
69. RPS7 ENSGALG00000016392 243.40 1959.16 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
70. gga-mir-3527 gga-mir-3527 243.40 1959.16
71. ENSGALG00000028992 ENSGALG00000028992 238.60 1920.53
72. RPS25 ENSGALG00000007699 237.00 1907.65 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
73. RPL7 ENSGALG00000035252 235.40 1894.77 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
74. RPLP2 ENSGALG00000034811 235.40 1894.77 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
75. STMN1 ENSGALG00000001475 233.79 1881.81 stathmin 1 [Source:NCBI gene;Acc:396057]
76. RPL23 ENSGALG00000001634 232.19 1868.93 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
77. BLMH ENSGALG00000004259 230.59 1856.05 bleomycin hydrolase [Source:NCBI gene;Acc:395996]
78. SET ENSGALG00000004701 230.59 1856.05 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
79. RPL38 ENSGALG00000001465 225.79 1817.42 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
80. SSR1 ENSGALG00000012798 217.78 1752.95 signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
81. RPL24 ENSGALG00000015339 216.18 1740.07 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
82. SLC25A6_1 ENSGALG00000016691 214.58 1727.19 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
83. H3-IX H3-IX 212.98 1714.31
84. UBB ENSGALG00000004509 209.77 1688.47 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
85. ENO1 ENSGALG00000002377 208.17 1675.59 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
86. HSPA8 ENSGALG00000006512 204.97 1649.84 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
87. RPS2 ENSGALG00000005490 203.37 1636.96 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
88. ANP32B ENSGALG00000037483 200.17 1611.20 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
89. RPL35 ENSGALG00000035677 196.96 1585.36 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
90. RPS3 ENSGALG00000017330 196.96 1585.36 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
91. NUCKS1 ENSGALG00000000708 195.36 1572.48 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
92. ENSGALG00000028649 ENSGALG00000028649 190.56 1533.85
93. RPL31 ENSGALG00000016775 190.56 1533.85 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
94. CNN3 ENSGALG00000005597 188.96 1520.97 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
95. EEF1B2 ENSGALG00000008590 188.96 1520.97 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
96. NME2 ENSGALG00000002932 188.96 1520.97 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
97. RPL10A ENSGALG00000002644 188.96 1520.97 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
98. RPS13 ENSGALG00000006096 188.96 1520.97 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
99. EIF4G2 ENSGALG00000005587 182.55 1469.37 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
100. MBD3 ENSGALG00000001101 182.55 1469.37 methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA