Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_posterior_slice_1, section s14.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 7744.53 62333.54
2. EEF1A EEF1A 1539.71 12392.69
3. MT-ATP6 MT-ATP6 1188.32 9564.45
4. RPL35A ENSGALG00000007611, ENSGALG00000041230 1115.49 8978.26 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
5. RPS3A ENSGALG00000010077 996.66 8021.84 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
6. RPS10 ENSGALG00000002813 991.55 7980.71 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
7. ENSGALG00000018384 ENSGALG00000018384 875.27 7044.80
8. RPLP1 ENSGALG00000030878 796.05 6407.18 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
9. RPL8 ENSGALG00000016232 670.83 5399.32 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
10. RPS8 ENSGALG00000010124 649.10 5224.42 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
11. MT-CO1 MT-CO1 643.99 5183.29
12. RPS23 ENSGALG00000015617 627.38 5049.60 ribosomal protein S23
13. MT-ND5 MT-ND5 609.49 4905.61
14. TMSB4X ENSGALG00000026383 606.94 4885.09 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
15. RPL19 ENSGALG00000001658 523.88 4216.56 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
16. RPLP0 ENSGALG00000023294 521.33 4196.04 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
17. RPS4 RPS4 500.88 4031.44
18. MT-ND4 MT-ND4 474.05 3815.49
19. gga-mir-3533 ENSGALG00000027736 470.22 3784.67 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
20. RPL27A ENSGALG00000005948 460.00 3702.41 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. TXN ENSGALG00000015704 452.33 3640.68 thioredoxin [Source:NCBI gene;Acc:396437]
22. HBZ ENSGALG00000023740 449.77 3620.07 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
23. RPL7A ENSGALG00000003197 448.50 3609.85 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
24. GAPDH ENSGALG00000014442 443.38 3568.64 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
25. MT-CYB MT-CYB 442.11 3558.42
26. RPL6 ENSGALG00000004818 431.88 3476.08 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
27. RAN ENSGALG00000002569 424.22 3414.43 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
28. RPL4 ENSGALG00000007711 417.83 3363.00 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
29. RPS6 ENSGALG00000015082 417.83 3363.00 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
30. ENSGALG00000002696 ENSGALG00000002696 414.00 3332.17
31. RPS28 ENSGALG00000024398 414.00 3332.17 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
32. RPL27 ENSGALG00000002837 406.33 3270.44 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
33. RPS21 ENSGALG00000005338 401.22 3229.31 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
34. RPS12 ENSGALG00000013990 393.55 3167.57 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
35. RPL23A ENSGALG00000003966 391.00 3147.05 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
36. RPL29 ENSGALG00000026978 369.27 2972.15 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
37. RPL26 RPL26 366.72 2951.63
38. AKAP12 ENSGALG00000036240 364.16 2931.02 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
39. RPL21 ENSGALG00000027035 355.22 2859.07 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
40. MT-ND3 MT-ND3 353.94 2848.76
41. RPL36AL ENSGALG00000004952 341.16 2745.90 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
42. RPS7 ENSGALG00000016392 337.33 2715.07 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
43. ENSGALG00000018386 ENSGALG00000018386 333.50 2684.25
44. HMGN5 ENSGALG00000007131 330.94 2663.64 high mobility group nucleosome binding domain 5, transcript variant X1
45. RPS14 ENSGALG00000004588 328.39 2643.12 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
46. RPS15A ENSGALG00000006771 327.11 2632.82 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
47. RPL18A 318.16 2560.78 ribosomal protein L18a
48. RPL37 ENSGALG00000014833 318.16 2560.78 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
49. RPL32 ENSGALG00000027142 314.33 2529.95 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
50. UBB ENSGALG00000004509 314.33 2529.95 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
51. RPS29 ENSGALG00000012229 309.22 2488.82 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
52. RPSA 305.39 2458.00 ribosomal protein SA
53. RPL23 ENSGALG00000001634 302.83 2437.39 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
54. gga-mir-3527 gga-mir-3527 301.55 2427.09
55. RPS11 ENSGALG00000017299 296.44 2385.96 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
56. PHB2 ENSGALG00000014567 291.33 2344.83 prohibitin 2 [Source:NCBI gene;Acc:771124]
57. SNRPD1 ENSGALG00000041334 291.33 2344.83 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
58. RPL15 ENSGALG00000011290 290.05 2334.53 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
59. RPL38 ENSGALG00000001465 290.05 2334.53 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
60. RPLP2 ENSGALG00000034811 290.05 2334.53 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
61. RPS15 ENSGALG00000015195 288.77 2324.23 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
62. RPL35 ENSGALG00000035677 286.22 2303.70 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
63. HSPA8 ENSGALG00000006512 284.94 2293.40 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
64. RPL13 ENSGALG00000006179 284.94 2293.40 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
65. ENO1 ENSGALG00000002377 281.11 2262.58 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
66. RPS16 ENSGALG00000026490 273.44 2200.84 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
67. RPS2 ENSGALG00000005490 273.44 2200.84 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
68. RPL14 ENSGALG00000043379 270.89 2180.32 ribosomal protein L14
69. CIRBP ENSGALG00000030918 268.33 2159.71 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
70. TCEB3 ENSGALG00000034625 267.05 2149.41 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
71. RPL12 ENSGALG00000008806 265.78 2139.19 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
72. MDK ENSGALG00000008367 264.50 2128.89 midkine [Source:NCBI gene;Acc:423196]
73. STMN1 ENSGALG00000001475 264.50 2128.89 stathmin 1 [Source:NCBI gene;Acc:396057]
74. RPL5 ENSGALG00000005922 258.11 2077.45 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
75. HMGB2 ENSGALG00000010745 249.16 2005.42 high mobility group box 2 [Source:NCBI gene;Acc:396482]
76. RPS13 ENSGALG00000006096 246.61 1984.89 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
77. MT-ND6 MT-ND6 236.39 1902.64
78. SLC25A6_1 ENSGALG00000016691 233.83 1882.03 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
79. RPS25 ENSGALG00000007699 231.28 1861.51 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
80. ENSGALG00000028649 ENSGALG00000028649 230.00 1851.21
81. ANP32B ENSGALG00000037483 228.72 1840.90 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
82. RPL24 ENSGALG00000015339 228.72 1840.90 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
83. ENSGALG00000028992 ENSGALG00000028992 224.89 1810.08
84. PPIA ENSGALG00000028600 222.33 1789.47 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
85. HSP90B1 ENSGALG00000033789 218.50 1758.64 heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
86. SET ENSGALG00000004701 215.94 1738.04 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
87. EEF1B2 ENSGALG00000008590 213.39 1717.52 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
88. HBG1 HBG1 212.11 1707.21
89. CRHOA CRHOA 210.83 1696.91
90. RPL10A ENSGALG00000002644 210.83 1696.91 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
91. RPS20 ENSGALG00000014432 208.28 1676.39 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
92. PSMC6 ENSGALG00000012408 205.72 1655.78 proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
93. RPS24 ENSGALG00000004871 204.44 1645.48 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
94. BLMH ENSGALG00000004259 203.16 1635.18 bleomycin hydrolase [Source:NCBI gene;Acc:395996]
95. RPL3 ENSGALG00000012172 203.16 1635.18 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
96. HMGN2 HMGN2 201.89 1624.96
97. RPL7 ENSGALG00000035252 200.61 1614.65 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
98. HBE 195.50 1573.52 hemoglobin subunit epsilon
99. MARCKSL1 ENSGALG00000032335 194.22 1563.22 MARCKS like 1 [Source:NCBI gene;Acc:770764]
100. H3-IX H3-IX 192.94 1552.92
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA