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Experiment Chicken_E4_posterior_slice_1, section s13.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 6026.75 48507.10
2. EEF1A EEF1A 1582.30 12735.35
3. MT-ATP6 MT-ATP6 1195.48 9621.98
4. RPS3A ENSGALG00000010077 920.89 7411.91 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
5. TMSB4X ENSGALG00000026383 839.70 6758.44 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 831.74 6694.37 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. MT-CO1 MT-CO1 765.68 6162.68
8. RPS10 ENSGALG00000002813 750.56 6040.98 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPS23 ENSGALG00000015617 727.48 5855.22 ribosomal protein S23
10. ENSGALG00000018384 ENSGALG00000018384 714.74 5752.68
11. RPLP1 ENSGALG00000030878 685.29 5515.65 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
12. gga-mir-3533 ENSGALG00000027736 638.33 5137.68 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
13. MT-CYB MT-CYB 592.17 4766.16
14. RPL8 ENSGALG00000016232 586.60 4721.33 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
15. RPS8 ENSGALG00000010124 573.07 4612.43 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. MT-ND5 MT-ND5 565.90 4554.72
17. MT-ND4 MT-ND4 564.31 4541.92
18. RPLP0 ENSGALG00000023294 524.52 4221.67 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
19. RPL4 ENSGALG00000007711 487.90 3926.93 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
20. GAPDH ENSGALG00000014442 465.62 3747.60 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
21. RPL7A ENSGALG00000003197 458.45 3689.90 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
22. RPS4 RPS4 453.68 3651.50
23. RPS6 ENSGALG00000015082 436.96 3516.93 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
24. RAN ENSGALG00000002569 416.27 3350.40 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
25. RPL27 ENSGALG00000002837 409.11 3292.78 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
26. ENSGALG00000002696 ENSGALG00000002696 408.31 3286.34
27. TXN ENSGALG00000015704 408.31 3286.34 thioredoxin [Source:NCBI gene;Acc:396437]
28. RPS21 ENSGALG00000005338 385.23 3100.57 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
29. RPL27A ENSGALG00000005948 382.84 3081.34 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
30. RPL21 ENSGALG00000027035 376.47 3030.07 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
31. RPL19 ENSGALG00000001658 375.68 3023.71 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
32. RPS12 ENSGALG00000013990 371.70 2991.68 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
33. RPL26 RPL26 368.51 2966.00
34. RPL32 ENSGALG00000027142 367.72 2959.64 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
35. RPL23A ENSGALG00000003966 362.94 2921.17 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
36. PHB2 ENSGALG00000014567 362.15 2914.81 prohibitin 2 [Source:NCBI gene;Acc:771124]
37. SNRPD1 ENSGALG00000041334 354.19 2850.75 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
38. RPL5 ENSGALG00000005922 351.00 2825.07 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
39. RPL6 ENSGALG00000004818 342.25 2754.64 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
40. RPS28 ENSGALG00000024398 322.35 2594.48 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
41. STMN1 ENSGALG00000001475 317.57 2556.00 stathmin 1 [Source:NCBI gene;Acc:396057]
42. HMGB2 ENSGALG00000010745 312.00 2511.17 high mobility group box 2 [Source:NCBI gene;Acc:396482]
43. RPL29 ENSGALG00000026978 312.00 2511.17 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
44. RPL15 ENSGALG00000011290 311.21 2504.81 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
45. gga-mir-3527 gga-mir-3527 309.62 2492.02
46. RPSA 307.23 2472.78 ribosomal protein SA
47. RPS15 ENSGALG00000015195 304.84 2453.55 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
48. RPL14 ENSGALG00000043379 297.68 2395.92 ribosomal protein L14
49. UBB ENSGALG00000004509 297.68 2395.92 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
50. RPL36AL ENSGALG00000004952 293.70 2363.88 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
51. CIRBP ENSGALG00000030918 286.53 2306.17 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
52. RPL18A 286.53 2306.17 ribosomal protein L18a
53. RPS14 ENSGALG00000004588 284.94 2293.38 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
54. AKAP12 ENSGALG00000036240 284.15 2287.02 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
55. RPS2 ENSGALG00000005490 284.15 2287.02 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
56. RPS7 ENSGALG00000016392 280.17 2254.99 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
57. RPL13 ENSGALG00000006179 279.37 2248.55 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
58. RPS15A ENSGALG00000006771 278.57 2242.11 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
59. MT-ND3 MT-ND3 274.59 2210.07
60. RPLP2 ENSGALG00000034811 272.21 2190.92 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
61. RPS29 ENSGALG00000012229 270.61 2178.04 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
62. RPS11 ENSGALG00000017299 266.64 2146.09 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
63. HSPA8 ENSGALG00000006512 265.84 2139.65 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
64. ENSGALG00000018386 ENSGALG00000018386 264.25 2126.85
65. TCEB3 ENSGALG00000034625 260.27 2094.82 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
66. RPL23 ENSGALG00000001634 254.70 2049.99 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
67. MDK ENSGALG00000008367 253.90 2043.55 midkine [Source:NCBI gene;Acc:423196]
68. RPS25 ENSGALG00000007699 253.10 2037.11 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
69. RPL12 ENSGALG00000008806 251.51 2024.31 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
70. RPS16 ENSGALG00000026490 250.72 2017.95 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
71. HMGN5 ENSGALG00000007131 249.92 2011.51 high mobility group nucleosome binding domain 5, transcript variant X1
72. RPL37 ENSGALG00000014833 242.76 1953.89 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
73. ENO1 ENSGALG00000002377 241.96 1947.45 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
74. H3-IX H3-IX 241.17 1941.09
75. RPS13 ENSGALG00000006096 225.25 1812.95 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
76. CRHOA CRHOA 222.86 1793.72
77. ANP32B ENSGALG00000037483 220.47 1774.48 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
78. BLMH ENSGALG00000004259 219.68 1768.12 bleomycin hydrolase [Source:NCBI gene;Acc:395996]
79. RPL35 ENSGALG00000035677 217.29 1748.89 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
80. RPS3 ENSGALG00000017330 217.29 1748.89 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
81. HSP90AB1 ENSGALG00000010175 216.49 1742.45 heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
82. RPL38 ENSGALG00000001465 214.10 1723.21 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
83. ENSGALG00000028649 ENSGALG00000028649 213.31 1716.85
84. PPIA ENSGALG00000028600 210.92 1697.62 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
85. PSMC6 ENSGALG00000012408 210.12 1691.18 proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
86. NME2 ENSGALG00000002932 209.33 1684.82 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
87. RPL24 ENSGALG00000015339 206.94 1665.58 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
88. RPL7 ENSGALG00000035252 206.94 1665.58 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
89. HMGN2 HMGN2 203.76 1639.99
90. SET ENSGALG00000004701 202.96 1633.55 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
91. SLC25A6_1 ENSGALG00000016691 202.96 1633.55 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
92. ENSGALG00000028992 ENSGALG00000028992 202.17 1627.19
93. MT-ND6 MT-ND6 198.98 1601.52
94. CNN3 ENSGALG00000005597 194.21 1563.12 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
95. MARCKSL1 ENSGALG00000032335 193.41 1556.69 MARCKS like 1 [Source:NCBI gene;Acc:770764]
96. GDI2 ENSGALG00000008169 191.82 1543.89 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
97. EEF1D 190.23 1531.09 eukaryotic translation elongation factor 1 delta, transcript variant X13
98. RPS20 ENSGALG00000014432 190.23 1531.09 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
99. EIF4G2 ENSGALG00000005587 188.63 1518.21 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
100. CALM CALM 187.84 1511.86
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA