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Experiment Chicken_E4_posterior_slice_1, section s12.

Sample reads: 124,242. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 7197.99 57936.75
2. MT-ATP6 MT-ATP6 1707.87 13746.68
3. ENSGALG00000018384 ENSGALG00000018384 1399.37 11263.55
4. EEF1A EEF1A 1274.61 10259.36
5. TMSB4X ENSGALG00000026383 1061.86 8546.93 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
6. RPS3A ENSGALG00000010077 906.16 7293.70 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
7. MT-CO1 MT-CO1 798.81 6429.64
8. RPS10 ENSGALG00000002813 769.80 6196.13 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPL35A ENSGALG00000007611, ENSGALG00000041230 768.83 6188.33 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
10. MT-ND5 MT-ND5 759.16 6110.49
11. MT-CYB MT-CYB 716.61 5768.01
12. MT-ND4 MT-ND4 677.92 5456.59
13. RPS23 ENSGALG00000015617 657.62 5293.19 ribosomal protein S23
14. ENSGALG00000018386 ENSGALG00000018386 646.01 5199.75
15. RPLP1 ENSGALG00000030878 598.62 4818.30 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
16. gga-mir-3533 ENSGALG00000027736 570.58 4592.61 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
17. RPLP0 ENSGALG00000023294 507.72 4086.65 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
18. RPL8 ENSGALG00000016232 503.85 4055.50 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
19. RAN ENSGALG00000002569 494.18 3977.66 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
20. RPS8 ENSGALG00000010124 474.84 3822.00 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
21. RPS12 ENSGALG00000013990 453.56 3650.71 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
22. GAPDH ENSGALG00000014442 451.63 3635.18 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
23. RPL4 ENSGALG00000007711 451.63 3635.18 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
24. TXN ENSGALG00000015704 445.82 3588.41 thioredoxin [Source:NCBI gene;Acc:396437]
25. RPL27 ENSGALG00000002837 421.65 3393.87 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
26. STMN1 ENSGALG00000001475 419.71 3378.25 stathmin 1 [Source:NCBI gene;Acc:396057]
27. RPL7A ENSGALG00000003197 416.81 3354.91 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
28. RPL27A ENSGALG00000005948 400.37 3222.59 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
29. RPL26 RPL26 398.44 3207.05
30. RPL23A ENSGALG00000003966 384.90 3098.07 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
31. RPL6 ENSGALG00000004818 375.23 3020.23 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
32. RPL15 ENSGALG00000011290 374.26 3012.43 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
33. RPS4 RPS4 335.58 2701.09
34. RPL19 ENSGALG00000001658 334.61 2693.28 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
35. RPS6 ENSGALG00000015082 328.81 2646.60 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
36. RPSA 325.91 2623.26 ribosomal protein SA
37. RPS15 ENSGALG00000015195 324.94 2615.45 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
38. RPL5 ENSGALG00000005922 322.04 2592.11 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
39. AKAP12 ENSGALG00000036240 318.17 2560.96 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
40. RPL29 ENSGALG00000026978 317.20 2553.15 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. gga-mir-3527 gga-mir-3527 310.43 2498.66
42. RPS15A ENSGALG00000006771 307.53 2475.31 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
43. HMGN5 ENSGALG00000007131 299.80 2413.10 high mobility group nucleosome binding domain 5, transcript variant X1
44. RPLP2 ENSGALG00000034811 298.83 2405.29 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
45. RPL13 ENSGALG00000006179 296.89 2389.67 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
46. SNRPD1 ENSGALG00000041334 296.89 2389.67 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
47. CIRBP ENSGALG00000030918 294.96 2374.14 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
48. PHB2 ENSGALG00000014567 292.06 2350.80 prohibitin 2 [Source:NCBI gene;Acc:771124]
49. HMGB2 ENSGALG00000010745 290.12 2335.18 high mobility group box 2 [Source:NCBI gene;Acc:396482]
50. RPL37 ENSGALG00000014833 290.12 2335.18 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
51. RPL21 ENSGALG00000027035 286.26 2304.11 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
52. RPS21 ENSGALG00000005338 283.35 2280.69 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
53. UBB ENSGALG00000004509 282.39 2272.96 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
54. RPS28 ENSGALG00000024398 279.49 2249.62 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
55. ENSGALG00000002696 ENSGALG00000002696 275.62 2218.47
56. RPL14 ENSGALG00000043379 275.62 2218.47 ribosomal protein L14
57. MT-ND3 MT-ND3 273.68 2202.86
58. RPL32 ENSGALG00000027142 272.72 2195.13 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
59. HSPA8 ENSGALG00000006512 271.75 2187.32 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
60. RPL36AL ENSGALG00000004952 271.75 2187.32 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
61. RPS14 ENSGALG00000004588 269.82 2171.79 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
62. RPS13 ENSGALG00000006096 267.88 2156.17 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
63. RPS29 ENSGALG00000012229 264.01 2125.02 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
64. RPS16 ENSGALG00000026490 259.18 2086.14 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
65. RPS25 ENSGALG00000007699 254.34 2047.19 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
66. MARCKSL1 ENSGALG00000032335 252.41 2031.65 MARCKS like 1 [Source:NCBI gene;Acc:770764]
67. RPL23 ENSGALG00000001634 246.61 1984.97 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
68. RPS7 ENSGALG00000016392 246.61 1984.97 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
69. PSMC6 ENSGALG00000012408 245.64 1977.16 proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
70. HSP90AA1 ENSGALG00000033212 244.67 1969.35 heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
71. MT-ND1 MT-ND1 237.90 1914.86
72. ENSGALG00000028992 ENSGALG00000028992 230.17 1852.64
73. BLMH ENSGALG00000004259 229.20 1844.83 bleomycin hydrolase [Source:NCBI gene;Acc:395996]
74. RPL12 ENSGALG00000008806 228.23 1837.03 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
75. RPL18A 228.23 1837.03 ribosomal protein L18a
76. RPS2 ENSGALG00000005490 228.23 1837.03 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
77. ANP32B ENSGALG00000037483 220.49 1774.73 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
78. MDK ENSGALG00000008367 219.53 1767.00 midkine [Source:NCBI gene;Acc:423196]
79. RPL35 ENSGALG00000035677 218.56 1759.19 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
80. TCEB3 ENSGALG00000034625 212.76 1712.51 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
81. EIF4G2 ENSGALG00000005587 208.89 1681.36 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
82. ENO1 ENSGALG00000002377 208.89 1681.36 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
83. HSP90AB1 ENSGALG00000010175 207.92 1673.55 heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
84. MT-ND6 MT-ND6 207.92 1673.55
85. RPS3 ENSGALG00000017330 207.92 1673.55 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
86. RPL38 ENSGALG00000001465 206.96 1665.82 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
87. GDI2 ENSGALG00000008169 205.02 1650.21 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
88. RPS11 ENSGALG00000017299 202.12 1626.87 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
89. SSR1 ENSGALG00000012798 196.32 1580.18 signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
90. CRHOA CRHOA 192.45 1549.03
91. PPIA ENSGALG00000028600 191.48 1541.23 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
92. RPL7 ENSGALG00000035252 189.55 1525.69 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
93. HSP90B1 ENSGALG00000033789 188.58 1517.88 heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
94. SLC25A6_1 ENSGALG00000016691 187.61 1510.08 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
95. H3-IX H3-IX 186.65 1502.35
96. ELAVL4 ENSGALG00000010533 184.71 1486.73 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
97. HMGN2 HMGN2 181.81 1463.39
98. ATP5G3 180.84 1455.58 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
99. RPL24 ENSGALG00000015339 178.91 1440.05 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
100. SET ENSGALG00000004701 178.91 1440.05 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA