Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s8.

Sample reads: 152,127. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2911.28 19139.64
2. EEF1A EEF1A 1567.38 10304.43
3. RPLP1 ENSGALG00000030878 1360.86 8946.71 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. RPS23 ENSGALG00000015617 1315.39 8647.77 ribosomal protein S23
5. GAPDH ENSGALG00000014442 1288.42 8470.46 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 1230.63 8090.53 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPLP0 ENSGALG00000023294 1229.09 8080.41 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
8. MT-ATP6 MT-ATP6 1186.71 7801.79
9. RPS10 ENSGALG00000002813 1162.05 7639.67 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. gga-mir-3533 ENSGALG00000027736 1115.81 7335.67 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. RPS12 ENSGALG00000013990 1024.88 6737.87 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
12. RPL27A ENSGALG00000005948 1002.54 6591.00 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
13. RPS8 ENSGALG00000010124 987.12 6489.63 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. RPS6 ENSGALG00000015082 942.43 6195.82 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
15. RPS3A ENSGALG00000010077 925.48 6084.39 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
16. RPL27 ENSGALG00000002837 921.62 6059.01 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
17. RPS29 ENSGALG00000012229 900.05 5917.20 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
18. RPS15 ENSGALG00000015195 886.95 5831.08 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
19. RPSA 875.39 5755.08 ribosomal protein SA
20. RPL32 ENSGALG00000027142 871.54 5729.77 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
21. RPL4 ENSGALG00000007711 870.77 5724.71 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
22. gga-mir-3527 gga-mir-3527 866.91 5699.33
23. RPL8 ENSGALG00000016232 866.14 5694.27 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. RPL19 ENSGALG00000001658 865.37 5689.20 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
25. RPS28 ENSGALG00000024398 837.63 5506.83 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
26. ENSGALG00000018384 ENSGALG00000018384 800.64 5263.65
27. RPL23A ENSGALG00000003966 783.69 5152.22 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
28. PPIA ENSGALG00000028600 779.84 5126.90 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
29. RPL26 RPL26 779.07 5121.84
30. MT-CO1 MT-CO1 755.18 4964.78
31. RPL7A ENSGALG00000003197 745.93 4903.97 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
32. TMSB4X ENSGALG00000026383 715.11 4701.35 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
33. RPS21 ENSGALG00000005338 696.61 4579.72 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
34. RPS2 ENSGALG00000005490 688.91 4529.10 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
35. RPS4 RPS4 687.37 4518.98
36. RPS14 ENSGALG00000004588 664.25 4366.98 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
37. MT-CYB MT-CYB 656.54 4316.29
38. RPS27A ENSGALG00000036790 656.54 4316.29 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
39. RPL13 ENSGALG00000006179 648.84 4265.67 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
40. RPS16 ENSGALG00000026490 648.84 4265.67 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
41. RPL29 ENSGALG00000026978 642.67 4225.11 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
42. NME2 ENSGALG00000002932 619.55 4073.11 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
43. RPL23 ENSGALG00000001634 594.89 3910.99 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
44. RPS11 ENSGALG00000017299 591.04 3885.68 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
45. RPL36AL ENSGALG00000004952 590.27 3880.61 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
46. RPL21 ENSGALG00000027035 587.96 3865.43 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
47. RPL12 ENSGALG00000008806 584.11 3840.12 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
48. RPL24 ENSGALG00000015339 572.55 3764.12 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
49. HBZ ENSGALG00000023740 567.92 3733.68 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
50. GNB2L1 ENSGALG00000000122 566.38 3723.55 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
51. RPL38 ENSGALG00000001465 565.61 3718.49 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
52. ENO1 ENSGALG00000002377 562.53 3698.24 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
53. RPL35 ENSGALG00000035677 555.59 3652.62 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
54. STMN1 ENSGALG00000001475 550.97 3622.24 stathmin 1 [Source:NCBI gene;Acc:396057]
55. RPL18A 546.35 3591.87 ribosomal protein L18a
56. RPS15A ENSGALG00000006771 540.95 3556.37 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
57. RPLP2 ENSGALG00000034811 535.56 3520.93 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
58. RPL5 ENSGALG00000005922 524.77 3450.00 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
59. RPS13 ENSGALG00000006096 524.77 3450.00 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
60. RPS7 ENSGALG00000016392 518.61 3409.50 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
61. RPL15 ENSGALG00000011290 517.84 3404.44 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
62. RPL14 ENSGALG00000043379 500.88 3292.94 ribosomal protein L14
63. ENSGALG00000002696 ENSGALG00000002696 498.57 3277.75
64. RPL36 ENSGALG00000000474 480.08 3156.19 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
65. UBB ENSGALG00000004509 480.08 3156.19 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
66. MT-ND5 MT-ND5 477.76 3140.94
67. RPS20 ENSGALG00000014432 467.75 3075.13 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
68. ENSGALG00000028992 ENSGALG00000028992 455.42 2994.07
69. RPS17 ENSGALG00000002157 451.56 2968.69 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
70. MT-ND3 MT-ND3 448.48 2948.44
71. HBE 443.86 2918.07 hemoglobin subunit epsilon
72. RPL7 ENSGALG00000035252 440.78 2897.82 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
73. RPS25 ENSGALG00000007699 433.07 2847.13 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
74. SNRPD1 ENSGALG00000041334 417.66 2745.82 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
75. HBG1 HBG1 404.56 2659.70
76. FTH FTH 398.39 2619.14
77. MT-ND1 MT-ND1 395.31 2598.89
78. RPL37 ENSGALG00000014833 389.15 2558.39 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
79. MT-ND4 MT-ND4 380.67 2502.64
80. RPL6 ENSGALG00000004818 377.59 2482.39 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
81. RPL3 ENSGALG00000012172 367.57 2416.52 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
82. MARCKSL1 ENSGALG00000032335 364.49 2396.27 MARCKS like 1 [Source:NCBI gene;Acc:770764]
83. RPL10A ENSGALG00000002644 358.32 2355.70 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
84. TCEB3 ENSGALG00000034625 350.62 2305.08 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
85. MT-ND6 MT-ND6 335.21 2203.77
86. TXN ENSGALG00000015704 333.66 2193.58 thioredoxin [Source:NCBI gene;Acc:396437]
87. ANP32B ENSGALG00000037483 330.58 2173.33 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
88. RPS3 ENSGALG00000017330 328.27 2158.15 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
89. HMGN2 HMGN2 327.50 2153.08
90. ATP5G3 322.88 2122.71 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
91. EEF1D 322.11 2117.65 eukaryotic translation elongation factor 1 delta, transcript variant X13
92. ENSGALG00000018386 ENSGALG00000018386 317.48 2087.21
93. HSPA8 ENSGALG00000006512 304.38 2001.09 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
94. MIF ENSGALG00000006326 298.22 1960.59 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
95. PKM ENSGALG00000001992 292.82 1925.09 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
96. DYL1 ENSGALG00000007153 285.12 1874.47 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
97. LDHB ENSGALG00000035836 284.35 1869.40 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
98. ALDOC ENSGALG00000026077 281.26 1849.09 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
99. RPL22 ENSGALG00000000719 275.87 1813.65 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
100. RPL31 ENSGALG00000016775 274.33 1803.53 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA