Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s32.

Sample reads: 151,792. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3173.62 20912.50
2. HBZ ENSGALG00000023740 2667.24 17575.72 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
3. HBG1 HBG1 2239.43 14756.68
4. HBE 2056.09 13548.56 hemoglobin subunit epsilon
5. ENSGALG00000018384 ENSGALG00000018384 1525.69 10053.50
6. RPLP1 ENSGALG00000030878 1495.14 9852.19 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
7. EEF1A EEF1A 1377.27 9075.49
8. MT-ATP6 MT-ATP6 1340.17 8831.02
9. RPS23 ENSGALG00000015617 1322.71 8715.97 ribosomal protein S23
10. RPLP0 ENSGALG00000023294 1289.97 8500.23 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
11. ENSGALG00000018386 ENSGALG00000018386 1248.49 8226.90
12. RPS10 ENSGALG00000002813 1150.27 7579.68 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
13. gga-mir-3527 gga-mir-3527 1067.33 7033.15
14. RPL35A ENSGALG00000007611, ENSGALG00000041230 977.84 6443.46 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
15. gga-mir-3533 ENSGALG00000027736 932.01 6141.46 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
16. RPS8 ENSGALG00000010124 912.36 6011.98 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
17. RPS6 ENSGALG00000015082 899.27 5925.72 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
18. GAPDH ENSGALG00000014442 890.53 5868.13 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
19. RPL19 ENSGALG00000001658 855.61 5638.02 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
20. RPL27A ENSGALG00000005948 851.25 5609.29 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPL32 ENSGALG00000027142 827.24 5451.08 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
22. RPL8 ENSGALG00000016232 822.87 5422.28 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
23. RPS12 ENSGALG00000013990 811.96 5350.39 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
24. RPS29 ENSGALG00000012229 809.78 5336.03 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
25. RPL4 ENSGALG00000007711 801.04 5278.44 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
26. RPS3A ENSGALG00000010077 794.50 5235.34 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
27. MT-CO1 MT-CO1 792.31 5220.91
28. RPL27 ENSGALG00000002837 781.40 5149.02 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
29. RPSA 757.39 4990.81 ribosomal protein SA
30. RPS28 ENSGALG00000024398 742.11 4890.12 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
31. RPS15 ENSGALG00000015195 737.75 4861.39 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
32. RPL26 RPL26 696.28 4588.12
33. MT-CYB MT-CYB 678.81 4473.00
34. RPL23A ENSGALG00000003966 661.35 4357.95 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
35. RPL29 ENSGALG00000026978 639.53 4214.17 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
36. RPS21 ENSGALG00000005338 615.52 4055.96 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
37. PPIA ENSGALG00000028600 611.15 4027.16 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
38. MDK ENSGALG00000008367 591.51 3897.74 midkine [Source:NCBI gene;Acc:423196]
39. RPL21 ENSGALG00000027035 582.78 3840.22 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
40. RPS4 RPS4 582.78 3840.22
41. RPL7A ENSGALG00000003197 569.68 3753.89 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
42. RPS16 ENSGALG00000026490 560.95 3696.37 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPL38 ENSGALG00000001465 558.77 3682.00 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
44. RPS20 ENSGALG00000014432 552.22 3638.84 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
45. GNB2L1 ENSGALG00000000122 550.04 3624.48 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
46. RPS2 ENSGALG00000005490 547.85 3610.05 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
47. RPS27A ENSGALG00000036790 547.85 3610.05 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
48. RPL6 ENSGALG00000004818 543.49 3581.32 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
49. RPL36AL ENSGALG00000004952 541.31 3566.95 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
50. RPS11 ENSGALG00000017299 536.94 3538.15 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
51. ENSGALG00000002696 ENSGALG00000002696 532.57 3509.36
52. RPS14 ENSGALG00000004588 530.39 3494.99 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
53. MT-ND3 MT-ND3 526.03 3466.26
54. MT-ND5 MT-ND5 526.03 3466.26
55. RPS13 ENSGALG00000006096 517.30 3408.74 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
56. RPL12 ENSGALG00000008806 515.11 3394.31 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
57. RPL13 ENSGALG00000006179 515.11 3394.31 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
58. RPL18A 515.11 3394.31 ribosomal protein L18a
59. RPL23 ENSGALG00000001634 510.75 3365.58 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
60. RPS7 ENSGALG00000016392 495.47 3264.89 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
61. NME2 ENSGALG00000002932 488.92 3221.73 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
62. ENSGALG00000028992 ENSGALG00000028992 484.56 3193.00
63. RPL5 ENSGALG00000005922 447.45 2948.46 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
64. MT-ND4 MT-ND4 445.27 2934.10
65. RPL14 ENSGALG00000043379 443.08 2919.67 ribosomal protein L14
66. RPL24 ENSGALG00000015339 440.90 2905.30 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
67. RPLP2 ENSGALG00000034811 438.72 2890.94 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
68. RPL35 ENSGALG00000035677 429.99 2833.41 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
69. FTH FTH 427.81 2819.05
70. RPS25 ENSGALG00000007699 423.44 2790.25 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
71. UBB ENSGALG00000004509 421.26 2775.88 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
72. RPS15A ENSGALG00000006771 416.89 2747.09 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
73. RPL15 ENSGALG00000011290 408.16 2689.56 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
74. MT-ND1 MT-ND1 397.25 2617.67
75. RPS17 ENSGALG00000002157 395.07 2603.31 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
76. ENO1 ENSGALG00000002377 392.88 2588.87 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
77. RPL7 ENSGALG00000035252 379.79 2502.62 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
78. EEF1D 368.87 2430.66 eukaryotic translation elongation factor 1 delta, transcript variant X13
79. TMSB4X ENSGALG00000026383 362.33 2387.57 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
80. CRHOA CRHOA 344.86 2272.45
81. RPL36 ENSGALG00000000474 340.50 2243.72 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
82. SNRPD1 ENSGALG00000041334 336.13 2214.92 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
83. TXN ENSGALG00000015704 331.77 2186.19 thioredoxin [Source:NCBI gene;Acc:396437]
84. STMN1 ENSGALG00000001475 305.58 2013.61 stathmin 1 [Source:NCBI gene;Acc:396057]
85. RPL10A ENSGALG00000002644 303.39 1999.18 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
86. TCEB3 ENSGALG00000034625 303.39 1999.18 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
87. MT-ND6 MT-ND6 294.66 1941.66
88. RPL31 ENSGALG00000016775 290.30 1912.93 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
89. RPL37 ENSGALG00000014833 288.11 1898.49 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
90. RPS24 ENSGALG00000004871 288.11 1898.49 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
91. RPL22 ENSGALG00000000719 285.93 1884.13 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
92. HSPA8 ENSGALG00000006512 281.57 1855.40 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
93. PODXL ENSGALG00000006409 277.20 1826.60 podocalyxin like [Source:NCBI gene;Acc:395755]
94. RPS3 ENSGALG00000017330 277.20 1826.60 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
95. NUCKS1 ENSGALG00000000708 272.84 1797.87 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
96. RPL3 ENSGALG00000012172 266.29 1754.71 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
97. TPT1 ENSGALG00000028872 261.92 1725.92 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
98. EEF2 ENSGALG00000033884 257.56 1697.19 eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
99. HMGN2 HMGN2 253.19 1668.39
100. ZNF593 ENSGALG00000000542 251.01 1654.03 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA