Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s25.

Sample reads: 151,801. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2876.80 18954.33
2. ENSGALG00000018384 ENSGALG00000018384 2202.46 14511.31
3. EEF1A EEF1A 1896.83 12497.61
4. MT-ATP6 MT-ATP6 1725.29 11367.39
5. RPLP1 ENSGALG00000030878 1486.71 9795.46 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
6. RPLP0 ENSGALG00000023294 1317.14 8678.22 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. RPS23 ENSGALG00000015617 1275.73 8405.38 ribosomal protein S23
8. RPS10 ENSGALG00000002813 1212.63 7989.64 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. gga-mir-3533 ENSGALG00000027736 1175.17 7742.82 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. RPL35A ENSGALG00000007611, ENSGALG00000041230 1141.65 7521.97 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
11. RPSA 1092.36 7197.22 ribosomal protein SA
12. GAPDH ENSGALG00000014442 1027.29 6768.49 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. ENSGALG00000018386 ENSGALG00000018386 997.71 6573.60
14. RPS3A ENSGALG00000010077 893.21 5885.08 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
15. RPS29 ENSGALG00000012229 887.29 5846.07 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
16. RPS15 ENSGALG00000015195 881.38 5807.13 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
17. RPL32 ENSGALG00000027142 871.52 5742.17 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
18. RPS6 ENSGALG00000015082 867.58 5716.21 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
19. gga-mir-3527 gga-mir-3527 867.58 5716.21
20. RPS12 ENSGALG00000013990 855.74 5638.20 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
21. RPL8 ENSGALG00000016232 847.86 5586.28 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
22. RPL4 ENSGALG00000007711 845.89 5573.30 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
23. RPS8 ENSGALG00000010124 838.00 5521.32 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
24. RPL26 RPL26 824.20 5430.39
25. RPL27 ENSGALG00000002837 818.28 5391.39 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
26. MDK ENSGALG00000008367 796.59 5248.48 midkine [Source:NCBI gene;Acc:423196]
27. RPS28 ENSGALG00000024398 788.70 5196.50 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
28. MT-CYB MT-CYB 763.07 5027.63
29. MT-ND5 MT-ND5 757.16 4988.69
30. RPL27A ENSGALG00000005948 755.18 4975.64 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
31. MT-CO1 MT-CO1 751.24 4949.68
32. RPS2 ENSGALG00000005490 751.24 4949.68 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
33. RPL7A ENSGALG00000003197 727.58 4793.79 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
34. RPL19 ENSGALG00000001658 725.61 4780.82 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
35. RPS4 RPS4 721.66 4754.79
36. RPL23A ENSGALG00000003966 699.98 4611.95 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
37. GNB2L1 ENSGALG00000000122 672.37 4430.03 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
38. RPS14 ENSGALG00000004588 664.48 4378.05 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
39. RPS15A ENSGALG00000006771 632.94 4170.24 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
40. NME2 ENSGALG00000002932 627.02 4131.24 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
41. RPL6 ENSGALG00000004818 619.13 4079.25 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
42. RPL12 ENSGALG00000008806 613.22 4040.31 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
43. RPL29 ENSGALG00000026978 613.22 4040.31 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
44. RPS21 ENSGALG00000005338 613.22 4040.31 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
45. ENSGALG00000002696 ENSGALG00000002696 605.33 3988.33
46. PPIA ENSGALG00000028600 601.39 3962.37 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
47. RPL36AL ENSGALG00000004952 573.78 3780.46 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
48. RPL13 ENSGALG00000006179 565.90 3728.54 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
49. RPLP2 ENSGALG00000034811 556.04 3663.57 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
50. RPL5 ENSGALG00000005922 542.23 3572.58 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
51. RPL18A 534.35 3520.66 ribosomal protein L18a
52. ENSGALG00000028992 ENSGALG00000028992 530.40 3494.64
53. RPL15 ENSGALG00000011290 530.40 3494.64 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
54. RPL38 ENSGALG00000001465 520.55 3429.74 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
55. RPL21 ENSGALG00000027035 504.77 3325.77 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
56. RPL24 ENSGALG00000015339 502.80 3312.79 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
57. RPL7 ENSGALG00000035252 494.91 3260.81 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
58. RPS27A ENSGALG00000036790 492.94 3247.83 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
59. RPS11 ENSGALG00000017299 485.05 3195.84 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
60. RPS7 ENSGALG00000016392 479.14 3156.90 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
61. TMSB4X ENSGALG00000026383 479.14 3156.90 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
62. RPS16 ENSGALG00000026490 475.19 3130.88 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
63. RPL23 ENSGALG00000001634 463.36 3052.93 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
64. RPS13 ENSGALG00000006096 463.36 3052.93 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
65. HBZ ENSGALG00000023740 455.48 3001.01 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
66. RPS25 ENSGALG00000007699 441.67 2910.02 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
67. RPS20 ENSGALG00000014432 439.70 2897.04 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
68. MT-ND3 MT-ND3 431.82 2845.13
69. MT-ND4 MT-ND4 429.84 2832.08
70. RPL35 ENSGALG00000035677 429.84 2832.08 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
71. RPL14 ENSGALG00000043379 423.93 2793.14 ribosomal protein L14
72. MT-ND6 MT-ND6 419.99 2767.18
73. TCEB3 ENSGALG00000034625 416.04 2741.16 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
74. STMN1 ENSGALG00000001475 398.30 2624.27 stathmin 1 [Source:NCBI gene;Acc:396057]
75. EEF1D 382.52 2520.30 eukaryotic translation elongation factor 1 delta, transcript variant X13
76. SNRPD1 ENSGALG00000041334 380.55 2507.32 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
77. UBB ENSGALG00000004509 380.55 2507.32 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
78. MT-ND1 MT-ND1 376.61 2481.36
79. RPS17 ENSGALG00000002157 374.63 2468.32 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
80. RPL10A ENSGALG00000002644 372.66 2455.34 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
81. RPL3 ENSGALG00000012172 370.69 2442.36 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
82. RPL36 ENSGALG00000000474 358.86 2364.42 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
83. RPS3 ENSGALG00000017330 335.20 2208.53 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
84. ENO1 ENSGALG00000002377 325.34 2143.56 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
85. RPL37 ENSGALG00000014833 319.43 2104.62 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
86. ANP32B ENSGALG00000037483 317.45 2091.58 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
87. FTH FTH 309.57 2039.66
88. RPS24 ENSGALG00000004871 293.79 1935.69 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
89. TXN ENSGALG00000015704 293.79 1935.69 thioredoxin [Source:NCBI gene;Acc:396437]
90. CRHOA CRHOA 283.93 1870.73
91. HSPA8 ENSGALG00000006512 281.96 1857.75 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
92. ATP5G3 278.02 1831.79 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
93. HBE 274.07 1805.76 hemoglobin subunit epsilon
94. HBG1 HBG1 274.07 1805.76
95. RPL31 ENSGALG00000016775 272.10 1792.78 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
96. DYL1 ENSGALG00000007153 270.13 1779.80 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
97. EEF1B2 ENSGALG00000008590 268.16 1766.82 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
98. TPT1 ENSGALG00000028872 266.19 1753.84 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
99. HMGN2 HMGN2 262.24 1727.82
100. MARCKSL1 ENSGALG00000032335 260.27 1714.84 MARCKS like 1 [Source:NCBI gene;Acc:770764]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA