Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s23.

Sample reads: 152,224. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4214.06 27685.41
2. EEF1A EEF1A 2280.07 14979.54
3. RPS23 ENSGALG00000015617 1598.53 10501.98 ribosomal protein S23
4. RPLP1 ENSGALG00000030878 1578.17 10368.22 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. RPLP0 ENSGALG00000023294 1415.31 9298.26 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPS10 ENSGALG00000002813 1412.65 9280.79 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
7. MT-ATP6 MT-ATP6 1377.25 9048.22
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 1355.12 8902.83 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. gga-mir-3527 gga-mir-3527 1164.82 7652.60
10. gga-mir-3533 ENSGALG00000027736 1056.83 6943.13 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. GAPDH ENSGALG00000014442 1047.10 6879.21 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. RPS12 ENSGALG00000013990 997.53 6553.54 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
13. RPS8 ENSGALG00000010124 996.65 6547.76 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. RPS15 ENSGALG00000015195 988.68 6495.40 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
15. RPS6 ENSGALG00000015082 960.36 6309.35 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
16. RPS3A ENSGALG00000010077 953.27 6262.77 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
17. RPL27A ENSGALG00000005948 951.50 6251.14 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
18. RPSA 946.19 6216.25 ribosomal protein SA
19. RPL4 ENSGALG00000007711 940.00 6175.59 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
20. MT-CO1 MT-CO1 912.56 5995.31
21. RPL32 ENSGALG00000027142 910.79 5983.68 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
22. RPL19 ENSGALG00000001658 903.71 5937.17 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
23. RPS29 ENSGALG00000012229 900.17 5913.91 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
24. RPL27 ENSGALG00000002837 898.40 5902.28 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
25. RPL8 ENSGALG00000016232 877.15 5762.68 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
26. RPL26 RPL26 830.24 5454.49
27. RPL7A ENSGALG00000003197 819.62 5384.72 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
28. RPS4 RPS4 816.08 5361.46
29. MT-CYB MT-CYB 809.00 5314.95
30. RPS2 ENSGALG00000005490 809.00 5314.95 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
31. RPS28 ENSGALG00000024398 796.61 5233.55 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
32. RPL23A ENSGALG00000003966 787.76 5175.40 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
33. RPL13 ENSGALG00000006179 750.58 4931.14 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
34. RPL29 ENSGALG00000026978 724.03 4756.71 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
35. RPS14 ENSGALG00000004588 694.82 4564.81 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
36. MT-ND3 MT-ND3 692.16 4547.33
37. RPS21 ENSGALG00000005338 690.39 4535.70 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. RPL5 ENSGALG00000005922 663.84 4361.28 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
39. RPL12 ENSGALG00000008806 643.48 4227.52 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
40. RPL36AL ENSGALG00000004952 642.60 4221.74 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
41. RPS11 ENSGALG00000017299 639.06 4198.48 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
42. TMSB4X ENSGALG00000026383 635.52 4175.22 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
43. PPIA ENSGALG00000028600 623.12 4093.76 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
44. RPL24 ENSGALG00000015339 620.47 4076.35 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
45. RPS27A ENSGALG00000036790 616.04 4047.24 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
46. RPS16 ENSGALG00000026490 609.85 4006.58 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
47. MT-ND5 MT-ND5 605.42 3977.47
48. ENSGALG00000002696 ENSGALG00000002696 604.54 3971.69
49. RPL21 ENSGALG00000027035 598.34 3930.96 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
50. RPL23 ENSGALG00000001634 598.34 3930.96 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
51. RPS15A ENSGALG00000006771 584.18 3837.93 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
52. MDK ENSGALG00000008367 582.41 3826.30 midkine [Source:NCBI gene;Acc:423196]
53. GNB2L1 ENSGALG00000000122 578.87 3803.04 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
54. RPL18A 577.98 3797.20 ribosomal protein L18a
55. RPS7 ENSGALG00000016392 555.86 3651.87 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
56. RPL35 ENSGALG00000035677 544.35 3576.26 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
57. RPLP2 ENSGALG00000034811 540.81 3553.00 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
58. RPL36 ENSGALG00000000474 538.15 3535.52 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
59. NME2 ENSGALG00000002932 514.25 3378.51 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
60. RPL15 ENSGALG00000011290 513.37 3372.72 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
61. RPS13 ENSGALG00000006096 506.29 3326.21 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
62. RPL38 ENSGALG00000001465 498.32 3273.85 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
63. RPS20 ENSGALG00000014432 496.55 3262.22 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
64. TCEB3 ENSGALG00000034625 495.67 3256.44 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
65. RPS25 ENSGALG00000007699 493.90 3244.81 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
66. RPL7 ENSGALG00000035252 489.47 3215.71 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
67. RPL14 ENSGALG00000043379 485.05 3186.67 ribosomal protein L14
68. ENSGALG00000028992 ENSGALG00000028992 470.00 3087.79
69. RPL6 ENSGALG00000004818 468.23 3076.16 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
70. EEF1D 467.34 3070.32 eukaryotic translation elongation factor 1 delta, transcript variant X13
71. ENSGALG00000018384 ENSGALG00000018384 456.72 3000.55
72. MT-ND4 MT-ND4 431.05 2831.90
73. RPS17 ENSGALG00000002157 418.66 2750.50 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
74. RPL37 ENSGALG00000014833 415.12 2727.24 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
75. MT-ND1 MT-ND1 393.88 2587.70
76. FTH FTH 387.68 2546.97
77. SNRPD1 ENSGALG00000041334 385.91 2535.34 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
78. ENO1 ENSGALG00000002377 384.14 2523.71 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
79. UBB ENSGALG00000004509 355.82 2337.66 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
80. RPL10A ENSGALG00000002644 351.39 2308.55 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
81. RPS24 ENSGALG00000004871 343.43 2256.26 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
82. RPL3 ENSGALG00000012172 342.54 2250.41 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
83. RPS3 ENSGALG00000017330 338.12 2221.37 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
84. STMN1 ENSGALG00000001475 332.81 2186.49 stathmin 1 [Source:NCBI gene;Acc:396057]
85. RPL31 ENSGALG00000016775 325.72 2139.91 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
86. CRHOA CRHOA 322.18 2116.65
87. ANP32B ENSGALG00000037483 309.79 2035.25 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
88. ATP5G3 304.48 2000.36 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
89. RPL22 ENSGALG00000000719 300.94 1977.11 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
90. HMGN2 HMGN2 290.32 1907.34
91. HBZ ENSGALG00000023740 289.43 1901.49 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
92. MT-ND6 MT-ND6 280.58 1843.35
93. RAN ENSGALG00000002569 277.93 1825.94 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
94. TXN ENSGALG00000015704 274.39 1802.68 thioredoxin [Source:NCBI gene;Acc:396437]
95. SLC25A6_1 ENSGALG00000016691 270.85 1779.42 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
96. PRDX1 ENSGALG00000010243 255.80 1680.55 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
97. DYL1 ENSGALG00000007153 253.14 1663.07 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
98. HBE 253.14 1663.07 hemoglobin subunit epsilon
99. MIF ENSGALG00000006326 252.26 1657.29 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
100. EEF1B2 ENSGALG00000008590 250.49 1645.66 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA