Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s2.

Sample reads: 152,215. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3243.76 21311.04
2. RPLP1 ENSGALG00000030878 1571.54 10324.79 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
3. EEF1A EEF1A 1553.04 10203.25
4. RPL35A ENSGALG00000007611, ENSGALG00000041230 1536.01 10091.37 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
5. RPS23 ENSGALG00000015617 1484.19 9750.92 ribosomal protein S23
6. RPS10 ENSGALG00000002813 1399.80 9196.49 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
7. GAPDH ENSGALG00000014442 1245.83 8184.93 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
8. RPS3A ENSGALG00000010077 1173.29 7708.35 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
9. RPLP0 ENSGALG00000023294 1118.51 7348.45 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
10. RPL27A ENSGALG00000005948 1074.84 7061.55 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
11. RPL19 ENSGALG00000001658 1071.14 7037.24 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
12. MT-ATP6 MT-ATP6 1057.81 6949.66
13. RPS8 ENSGALG00000010124 1024.50 6730.82 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. RPL8 ENSGALG00000016232 1017.84 6687.06 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
15. RPS6 ENSGALG00000015082 1005.99 6609.21 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
16. ENSGALG00000018384 ENSGALG00000018384 988.97 6497.39
17. RPL27 ENSGALG00000002837 987.49 6487.67 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
18. RPS12 ENSGALG00000013990 966.76 6351.48 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
19. RPL32 ENSGALG00000027142 921.61 6054.85 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
20. RPS29 ENSGALG00000012229 920.87 6049.98 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
21. RPS28 ENSGALG00000024398 898.66 5904.07 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
22. ENSGALG00000018386 ENSGALG00000018386 882.37 5797.04
23. RPSA 875.71 5753.29 ribosomal protein SA
24. RPL23A ENSGALG00000003966 870.53 5719.26 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
25. RPS15 ENSGALG00000015195 865.35 5685.23 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
26. RPL7A ENSGALG00000003197 864.61 5680.36 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. RPL4 ENSGALG00000007711 854.24 5612.23 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
28. RPL26 RPL26 823.15 5407.98
29. RPS4 RPS4 806.87 5301.02
30. RPS21 ENSGALG00000005338 775.78 5096.76 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
31. gga-mir-3527 gga-mir-3527 773.56 5082.18
32. RPL29 ENSGALG00000026978 716.56 4707.70 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
33. RPS2 ENSGALG00000005490 692.87 4552.06 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
34. RPS14 ENSGALG00000004588 689.91 4532.61 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
35. ENSGALG00000002696 ENSGALG00000002696 681.77 4479.13
36. RPL23 ENSGALG00000001634 681.77 4479.13 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
37. RPL36AL ENSGALG00000004952 676.58 4445.03 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
38. RPS16 ENSGALG00000026490 668.44 4391.56 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
39. gga-mir-3533 ENSGALG00000027736 664.74 4367.25 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
40. RPL18A 662.52 4352.66 ribosomal protein L18a
41. RPL13 ENSGALG00000006179 654.38 4299.18 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
42. MT-CO1 MT-CO1 644.01 4231.05
43. RPS27A ENSGALG00000036790 629.95 4138.68 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
44. RPL12 ENSGALG00000008806 626.25 4114.37 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
45. RPL38 ENSGALG00000001465 621.07 4080.34 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
46. RPS11 ENSGALG00000017299 618.11 4060.89 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
47. RPL24 ENSGALG00000015339 604.78 3973.32 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
48. RPL21 ENSGALG00000027035 597.38 3924.70 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
49. TMSB4X ENSGALG00000026383 594.42 3905.25 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
50. NME2 ENSGALG00000002932 592.94 3895.53 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
51. RPS20 ENSGALG00000014432 592.94 3895.53 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
52. RPLP2 ENSGALG00000034811 578.87 3803.09 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
53. RPS7 ENSGALG00000016392 572.21 3759.34 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
54. RPL5 ENSGALG00000005922 571.47 3754.48 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
55. RPL35 ENSGALG00000035677 565.55 3715.58 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
56. ENO1 ENSGALG00000002377 561.11 3686.41 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
57. PPIA ENSGALG00000028600 561.11 3686.41 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
58. RPS15A ENSGALG00000006771 559.63 3676.69 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
59. MT-CYB MT-CYB 548.52 3603.70
60. CRABP-I ENSGALG00000003193 543.34 3569.67 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
61. ENSGALG00000028992 ENSGALG00000028992 535.94 3521.05
62. TCEB3 ENSGALG00000034625 535.94 3521.05 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
63. RPL15 ENSGALG00000011290 532.24 3496.74 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
64. RPS25 ENSGALG00000007699 521.87 3428.61 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
65. RPS13 ENSGALG00000006096 520.39 3418.89 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
66. SNRPD1 ENSGALG00000041334 512.99 3370.27 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
67. RPL6 ENSGALG00000004818 509.29 3345.96 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
68. RPL14 ENSGALG00000043379 507.81 3336.24 ribosomal protein L14
69. RPL7 ENSGALG00000035252 506.33 3326.52 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
70. RPL36 ENSGALG00000000474 505.59 3321.65 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
71. UBB ENSGALG00000004509 475.98 3127.12 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
72. MT-ND3 MT-ND3 450.81 2961.76
73. MT-ND5 MT-ND5 441.93 2903.42
74. STMN1 ENSGALG00000001475 438.23 2879.11 stathmin 1 [Source:NCBI gene;Acc:396057]
75. RPS17 ENSGALG00000002157 427.86 2810.98 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
76. RPL10A ENSGALG00000002644 427.12 2806.12 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
77. GNB2L1 ENSGALG00000000122 404.91 2660.20 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
78. RAN ENSGALG00000002569 381.97 2509.49 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
79. RPL37 ENSGALG00000014833 379.75 2494.90 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
80. EEF1D 373.08 2451.08 eukaryotic translation elongation factor 1 delta, transcript variant X13
81. ATP5G3 369.38 2426.77 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
82. TXN ENSGALG00000015704 359.02 2358.71 thioredoxin [Source:NCBI gene;Acc:396437]
83. RPS3 ENSGALG00000017330 343.47 2256.55 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
84. RPL3 ENSGALG00000012172 339.77 2232.24 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
85. HSPA8 ENSGALG00000006512 336.07 2207.93 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
86. MIF ENSGALG00000006326 330.89 2173.90 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
87. RPL31 ENSGALG00000016775 330.89 2173.90 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
88. ANP32B ENSGALG00000037483 322.75 2120.42 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
89. HMGN2 HMGN2 322.01 2115.56
90. LDHB ENSGALG00000035836 319.79 2100.97 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
91. MDK ENSGALG00000008367 300.54 1974.50 midkine [Source:NCBI gene;Acc:423196]
92. FTH FTH 298.32 1959.92
93. RPL22 ENSGALG00000000719 296.84 1950.20 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
94. PRDX1 ENSGALG00000010243 296.10 1945.33 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
95. MT-ND1 MT-ND1 293.14 1925.89
96. MT-ND4 MT-ND4 292.40 1921.03
97. RPS24 ENSGALG00000004871 291.66 1916.16 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
98. SLC25A6_1 ENSGALG00000016691 281.29 1848.04 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
99. MARCKSL1 ENSGALG00000032335 277.59 1823.73 MARCKS like 1 [Source:NCBI gene;Acc:770764]
100. MT-ND6 MT-ND6 273.15 1794.56
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA