Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s19.

Sample reads: 152,319. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4082.31 26801.84
2. MT-ATP6 MT-ATP6 2317.34 15214.18
3. EEF1A EEF1A 1927.43 12654.28
4. RPLP1 ENSGALG00000030878 1818.13 11936.68 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. RPLP0 ENSGALG00000023294 1521.26 9987.62 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPS23 ENSGALG00000015617 1482.86 9735.51 ribosomal protein S23
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 1326.31 8707.71 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. gga-mir-3527 gga-mir-3527 1293.81 8494.33
9. RPS10 ENSGALG00000002813 1209.63 7941.66 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. GAPDH ENSGALG00000014442 1169.75 7679.83 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. RPL27A ENSGALG00000005948 991.04 6506.54 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
12. RPS12 ENSGALG00000013990 986.61 6477.45 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
13. MT-CYB MT-CYB 968.88 6361.05
14. RPSA 964.45 6331.96 ribosomal protein SA
15. RPL27 ENSGALG00000002837 962.98 6322.31 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
16. RPS3A ENSGALG00000010077 960.02 6302.88 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
17. RPS6 ENSGALG00000015082 960.02 6302.88 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
18. gga-mir-3533 ENSGALG00000027736 949.68 6234.99 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
19. MT-CO1 MT-CO1 943.77 6196.19
20. RPS8 ENSGALG00000010124 933.44 6128.37 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
21. RPL19 ENSGALG00000001658 918.67 6031.40 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
22. RPL4 ENSGALG00000007711 909.80 5973.17 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
23. RPL8 ENSGALG00000016232 908.33 5963.52 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. RPS15 ENSGALG00000015195 903.90 5934.43 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
25. MT-ND5 MT-ND5 874.36 5740.49
26. RPS2 ENSGALG00000005490 858.11 5633.80 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
27. RPL32 ENSGALG00000027142 827.10 5430.21 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
28. RPS29 ENSGALG00000012229 824.14 5410.78 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
29. RPL23A ENSGALG00000003966 809.37 5313.81 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
30. RPL7A ENSGALG00000003197 791.65 5197.47 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
31. RPL26 RPL26 781.31 5129.58
32. RPS4 RPS4 731.09 4799.87
33. MT-ND3 MT-ND3 726.66 4770.79
34. RPS14 ENSGALG00000004588 713.37 4683.53 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
35. RPL12 ENSGALG00000008806 710.42 4664.16 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
36. RPL21 ENSGALG00000027035 705.98 4635.01 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
37. RPS21 ENSGALG00000005338 692.69 4547.76 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. RPL13 ENSGALG00000006179 674.97 4431.42 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
39. RPS28 ENSGALG00000024398 664.63 4363.54 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
40. RPS27A ENSGALG00000036790 646.91 4247.20 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
41. RPL18A 642.48 4218.11 ribosomal protein L18a
42. RPS16 ENSGALG00000026490 636.57 4179.31 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPL29 ENSGALG00000026978 629.18 4130.79 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
44. ENSGALG00000002696 ENSGALG00000002696 621.80 4082.34
45. RPL36AL ENSGALG00000004952 621.80 4082.34 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
46. RPS11 ENSGALG00000017299 620.32 4072.63 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
47. PPIA ENSGALG00000028600 618.84 4062.91 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
48. RPL15 ENSGALG00000011290 611.46 4014.46 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
49. RPLP2 ENSGALG00000034811 605.55 3975.66 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
50. RPS15A ENSGALG00000006771 593.74 3898.12 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
51. RPL5 ENSGALG00000005922 577.49 3791.43 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
52. ENSGALG00000018384 ENSGALG00000018384 574.54 3772.06
53. RPL38 ENSGALG00000001465 564.20 3704.18 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
54. MDK ENSGALG00000008367 559.77 3675.09 midkine [Source:NCBI gene;Acc:423196]
55. RPL23 ENSGALG00000001634 555.34 3646.01 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
56. TMSB4X ENSGALG00000026383 552.38 3626.57 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
57. RPS20 ENSGALG00000014432 546.47 3587.77 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
58. RPL7 ENSGALG00000035252 533.18 3500.52 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
59. RPS7 ENSGALG00000016392 519.89 3413.27 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
60. MT-ND4 MT-ND4 508.07 3335.66
61. NME2 ENSGALG00000002932 497.73 3267.78 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
62. MT-ND1 MT-ND1 494.78 3248.41
63. RPL14 ENSGALG00000043379 493.30 3238.69 ribosomal protein L14
64. RPL24 ENSGALG00000015339 484.44 3180.52 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
65. RPS25 ENSGALG00000007699 474.10 3112.64 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
66. GNB2L1 ENSGALG00000000122 471.15 3093.27 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
67. EEF1D 459.33 3015.67 eukaryotic translation elongation factor 1 delta, transcript variant X13
68. ENSGALG00000028992 ENSGALG00000028992 456.38 2996.30
69. RPL35 ENSGALG00000035677 454.90 2986.58 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
70. RPS13 ENSGALG00000006096 453.43 2976.93 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
71. RPL6 ENSGALG00000004818 450.47 2957.50 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
72. SNRPD1 ENSGALG00000041334 437.18 2870.25 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
73. RPS17 ENSGALG00000002157 432.75 2841.16 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
74. RPL36 ENSGALG00000000474 423.89 2782.99 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
75. UBB ENSGALG00000004509 417.98 2744.19 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
76. TCEB3 ENSGALG00000034625 413.55 2715.11 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
77. RPL10A ENSGALG00000002644 400.26 2627.85 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
78. RPL3 ENSGALG00000012172 398.78 2618.14 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
79. ENO1 ENSGALG00000002377 378.10 2482.36 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
80. MT-ND6 MT-ND6 366.29 2404.83
81. FTH FTH 352.99 2317.51
82. RPS3 ENSGALG00000017330 351.52 2307.86 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
83. RPL37 ENSGALG00000014833 347.08 2278.71 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
84. MIF ENSGALG00000006326 336.75 2210.89 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
85. ANP32B ENSGALG00000037483 333.79 2191.45 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
86. RAN ENSGALG00000002569 324.93 2133.28 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
87. ENSGALG00000018386 ENSGALG00000018386 320.50 2104.20
88. TXN ENSGALG00000015704 299.82 1968.43 thioredoxin [Source:NCBI gene;Acc:396437]
89. RPL31 ENSGALG00000016775 292.44 1919.97 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
90. ATP5G3 288.01 1890.89 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
91. STMN1 ENSGALG00000001475 286.53 1881.17 stathmin 1 [Source:NCBI gene;Acc:396057]
92. SLC25A6_1 ENSGALG00000016691 282.10 1852.09 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
93. EEF1B2 ENSGALG00000008590 277.67 1823.00 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
94. NUCKS1 ENSGALG00000000708 276.19 1813.29 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
95. TPT1 ENSGALG00000028872 270.28 1774.49 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
96. RPL22 ENSGALG00000000719 267.33 1755.12 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
97. PRDX1 ENSGALG00000010243 255.51 1677.52 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
98. ENSGALG00000022570 ENSGALG00000022570 254.04 1667.86
99. HMGN2 HMGN2 252.56 1658.15
100. CRHOA CRHOA 251.08 1648.43
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA