Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s14.

Sample reads: 152,098. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3073.01 20205.43
2. RPLP1 ENSGALG00000030878 1683.10 11066.60 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
3. EEF1A EEF1A 1601.55 10530.39
4. RPLP0 ENSGALG00000023294 1450.38 9536.43 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. MT-ATP6 MT-ATP6 1359.67 8940.00
6. RPS23 ENSGALG00000015617 1343.18 8831.58 ribosomal protein S23
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 1308.36 8602.63 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS10 ENSGALG00000002813 1233.23 8108.64 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. GAPDH ENSGALG00000014442 1068.31 7024.27 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. RPS29 ENSGALG00000012229 1000.51 6578.48 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
11. RPL19 ENSGALG00000001658 992.27 6524.30 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
12. RPS6 ENSGALG00000015082 978.52 6433.89 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
13. gga-mir-3527 gga-mir-3527 941.88 6192.98
14. RPL8 ENSGALG00000016232 940.96 6186.93 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
15. RPS8 ENSGALG00000010124 928.13 6102.57 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. RPSA 923.55 6072.46 ribosomal protein SA
17. RPS3A ENSGALG00000010077 918.97 6042.34 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
18. ENSGALG00000018384 ENSGALG00000018384 912.56 6000.20
19. RPL4 ENSGALG00000007711 907.06 5964.03 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
20. RPL27A ENSGALG00000005948 904.31 5945.95 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPS12 ENSGALG00000013990 889.65 5849.56 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
22. gga-mir-3533 ENSGALG00000027736 883.24 5807.42 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
23. RPL27 ENSGALG00000002837 864.91 5686.89 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
24. RPS28 ENSGALG00000024398 848.42 5578.47 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
25. RPS15 ENSGALG00000015195 792.53 5210.99 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
26. RPS4 RPS4 787.95 5180.87
27. RPL32 ENSGALG00000027142 776.04 5102.56 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
28. RPL23A ENSGALG00000003966 765.04 5030.24 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
29. RPL26 RPL26 752.22 4945.94
30. MT-CO1 MT-CO1 751.30 4939.89
31. RPS11 ENSGALG00000017299 737.56 4849.55 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
32. RPS21 ENSGALG00000005338 710.99 4674.85 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
33. RPS2 ENSGALG00000005490 708.24 4656.77 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
34. PPIA ENSGALG00000028600 706.41 4644.74 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
35. RPL7A ENSGALG00000003197 700.91 4608.57 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
36. RPS14 ENSGALG00000004588 667.93 4391.72 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
37. RPS20 ENSGALG00000014432 654.18 4301.32 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
38. RPL23 ENSGALG00000001634 631.28 4150.75 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
39. MT-ND5 MT-ND5 620.28 4078.42
40. RPL18A 593.71 3903.72 ribosomal protein L18a
41. RPS27A ENSGALG00000036790 591.88 3891.69 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
42. HBZ ENSGALG00000023740 589.13 3873.60 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
43. RPL12 ENSGALG00000008806 585.47 3849.54 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
44. RPS13 ENSGALG00000006096 584.55 3843.49 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
45. MT-CYB MT-CYB 581.80 3825.41
46. RPL21 ENSGALG00000027035 580.88 3819.36 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
47. RPL13 ENSGALG00000006179 576.30 3789.25 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
48. RPL24 ENSGALG00000015339 576.30 3789.25 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
49. RPL29 ENSGALG00000026978 571.72 3759.13 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
50. RPL38 ENSGALG00000001465 559.81 3680.82 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
51. NME2 ENSGALG00000002932 558.89 3674.77 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
52. TMSB4X ENSGALG00000026383 555.23 3650.71 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
53. RPS16 ENSGALG00000026490 538.74 3542.28 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
54. RPS7 ENSGALG00000016392 535.99 3524.20 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. RPL36AL ENSGALG00000004952 531.41 3494.09 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
56. ENSGALG00000002696 ENSGALG00000002696 527.74 3469.96
57. RPL35 ENSGALG00000035677 521.33 3427.81 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
58. RPL14 ENSGALG00000043379 520.41 3421.76 ribosomal protein L14
59. RPL5 ENSGALG00000005922 520.41 3421.76 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
60. RPLP2 ENSGALG00000034811 510.34 3355.55 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
61. RPL15 ENSGALG00000011290 507.59 3337.47 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
62. RPS25 ENSGALG00000007699 487.43 3204.91 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
63. MT-ND3 MT-ND3 483.76 3180.78
64. RPS15A ENSGALG00000006771 478.27 3144.69 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
65. RPL6 ENSGALG00000004818 473.69 3114.57 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
66. SNRPD1 ENSGALG00000041334 464.52 3054.28 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
67. HBG1 HBG1 448.03 2945.85
68. RPS17 ENSGALG00000002157 448.03 2945.85 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
69. RPL7 ENSGALG00000035252 442.53 2909.69 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
70. RPL36 ENSGALG00000000474 441.62 2903.71 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
71. ENSGALG00000028992 ENSGALG00000028992 437.95 2879.58
72. ENO1 ENSGALG00000002377 429.71 2825.40 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
73. GNB2L1 ENSGALG00000000122 415.96 2734.99 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
74. MT-ND6 MT-ND6 414.13 2722.96
75. ENSGALG00000018386 ENSGALG00000018386 409.55 2692.84
76. UBB ENSGALG00000004509 406.80 2674.76 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
77. HBE 401.30 2638.60 hemoglobin subunit epsilon
78. MT-ND1 MT-ND1 382.98 2518.14
79. TCEB3 ENSGALG00000034625 381.15 2506.11 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
80. RPL37 ENSGALG00000014833 379.32 2494.08 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
81. RPL10A ENSGALG00000002644 376.57 2476.00 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
82. EEF1D 365.57 2403.67 eukaryotic translation elongation factor 1 delta, transcript variant X13
83. MT-ND4 MT-ND4 357.33 2349.49
84. RPL3 ENSGALG00000012172 354.58 2331.41 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
85. RPS24 ENSGALG00000004871 350.00 2301.29 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
86. TXN ENSGALG00000015704 346.33 2277.16 thioredoxin [Source:NCBI gene;Acc:396437]
87. MDK ENSGALG00000008367 339.00 2228.97 midkine [Source:NCBI gene;Acc:423196]
88. ANP32B ENSGALG00000037483 332.59 2186.82 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
89. ATP5G3 332.59 2186.82 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
90. MARCKSL1 ENSGALG00000032335 318.84 2096.41 MARCKS like 1 [Source:NCBI gene;Acc:770764]
91. HMGN2 HMGN2 310.60 2042.23
92. FTH FTH 309.68 2036.19
93. RAN ENSGALG00000002569 309.68 2036.19 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
94. HSPA8 ENSGALG00000006512 307.85 2024.15 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
95. STMN1 ENSGALG00000001475 302.35 1987.99 stathmin 1 [Source:NCBI gene;Acc:396057]
96. RPL22 ENSGALG00000000719 289.53 1903.70 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
97. MIF ENSGALG00000006326 282.20 1855.50 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
98. TPT1 ENSGALG00000028872 273.03 1795.21 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
99. NUCKS1 ENSGALG00000000708 270.29 1777.19 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
100. PRDX1 ENSGALG00000010243 269.37 1771.14 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA