Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s10.

Sample reads: 152,101. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3689.48 24257.44
2. MT-ATP6 MT-ATP6 1781.63 11713.79
3. EEF1A EEF1A 1403.78 9229.52
4. RPS23 ENSGALG00000015617 1369.89 9006.70 ribosomal protein S23
5. RPLP1 ENSGALG00000030878 1363.12 8962.19 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
6. RPLP0 ENSGALG00000023294 1284.33 8444.16 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. RPS10 ENSGALG00000002813 1230.11 8087.68 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 1206.39 7931.72 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. gga-mir-3527 gga-mir-3527 1103.88 7257.75
10. GAPDH ENSGALG00000014442 1046.27 6878.97 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. RPL27A ENSGALG00000005948 1013.23 6661.74 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
12. RPS29 ENSGALG00000012229 981.04 6450.10 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
13. MT-CO1 MT-CO1 969.18 6372.13
14. RPS3A ENSGALG00000010077 956.47 6288.56 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
15. RPL27 ENSGALG00000002837 951.39 6255.16 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
16. RPS12 ENSGALG00000013990 946.30 6221.69 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
17. RPL19 ENSGALG00000001658 944.61 6210.58 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
18. RPL4 ENSGALG00000007711 894.63 5881.98 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
19. gga-mir-3533 ENSGALG00000027736 867.52 5703.74 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
20. RPS8 ENSGALG00000010124 865.82 5692.56 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
21. RPS6 ENSGALG00000015082 835.32 5492.03 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
22. RPL32 ENSGALG00000027142 818.38 5380.65 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
23. RPL8 ENSGALG00000016232 808.21 5313.79 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. RPS28 ENSGALG00000024398 806.52 5302.67 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
25. RPS15 ENSGALG00000015195 803.98 5285.98 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
26. MT-CYB MT-CYB 769.24 5057.57
27. RPL23A ENSGALG00000003966 763.31 5018.58 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
28. RPSA 759.92 4996.29 ribosomal protein SA
29. TMSB4X ENSGALG00000026383 752.30 4946.19 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
30. RPL26 RPL26 744.67 4896.03
31. PPIA ENSGALG00000028600 700.62 4606.41 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
32. ENSGALG00000018384 ENSGALG00000018384 681.98 4483.85
33. RPL7A ENSGALG00000003197 673.51 4428.17 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
34. RPS21 ENSGALG00000005338 669.27 4400.29 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
35. RPS4 RPS4 669.27 4400.29
36. RPS14 ENSGALG00000004588 633.69 4166.36 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
37. RPL13 ENSGALG00000006179 627.76 4127.37 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
38. RPS2 ENSGALG00000005490 617.60 4060.57 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
39. RPL38 ENSGALG00000001465 605.74 3982.59 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
40. RPL29 ENSGALG00000026978 604.04 3971.42 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. MT-ND3 MT-ND3 582.86 3832.16
42. RPS11 ENSGALG00000017299 580.32 3815.46 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
43. RPL18A 564.22 3709.61 ribosomal protein L18a
44. STMN1 ENSGALG00000001475 561.68 3692.91 stathmin 1 [Source:NCBI gene;Acc:396057]
45. MT-ND5 MT-ND5 560.84 3687.39
46. RPS27A ENSGALG00000036790 556.60 3659.51 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
47. RPL24 ENSGALG00000015339 554.90 3648.33 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
48. ENSGALG00000002696 ENSGALG00000002696 551.52 3626.11
49. RPS20 ENSGALG00000014432 548.97 3609.35 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
50. RPL12 ENSGALG00000008806 548.13 3603.82 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
51. RPL21 ENSGALG00000027035 546.43 3592.65 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
52. NME2 ENSGALG00000002932 543.04 3570.36 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
53. RPL36AL ENSGALG00000004952 537.11 3531.37 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
54. RPS16 ENSGALG00000026490 536.27 3525.85 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. RPLP2 ENSGALG00000034811 527.79 3470.09 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
56. RPL23 ENSGALG00000001634 524.41 3447.87 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
57. RPS7 ENSGALG00000016392 499.84 3286.33 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
58. RPS15A ENSGALG00000006771 498.99 3280.74 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
59. RPL15 ENSGALG00000011290 498.14 3275.15 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
60. RPL5 ENSGALG00000005922 494.75 3252.86 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
61. RPL35 ENSGALG00000035677 482.89 3174.89 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
62. UBB ENSGALG00000004509 482.89 3174.89 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
63. ENO1 ENSGALG00000002377 475.27 3124.79 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
64. RPL14 ENSGALG00000043379 471.03 3096.91 ribosomal protein L14
65. RPS13 ENSGALG00000006096 462.56 3041.22 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
66. RPL7 ENSGALG00000035252 458.33 3013.41 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
67. RPL6 ENSGALG00000004818 438.84 2885.27 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
68. RPL36 ENSGALG00000000474 437.99 2879.68 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
69. MT-ND1 MT-ND1 433.76 2851.87
70. ENSGALG00000028992 ENSGALG00000028992 431.22 2835.17
71. RPS25 ENSGALG00000007699 430.37 2829.58 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
72. RPL37 ENSGALG00000014833 412.58 2712.61 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
73. GNB2L1 ENSGALG00000000122 406.65 2673.63 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
74. MARCKSL1 ENSGALG00000032335 402.41 2645.75 MARCKS like 1 [Source:NCBI gene;Acc:770764]
75. SNRPD1 ENSGALG00000041334 395.63 2601.17 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
76. TCEB3 ENSGALG00000034625 390.55 2567.77 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
77. HBZ ENSGALG00000023740 382.08 2512.08 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
78. RPS17 ENSGALG00000002157 372.76 2450.81 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
79. MT-ND4 MT-ND4 371.91 2445.22
80. TXN ENSGALG00000015704 370.22 2434.11 thioredoxin [Source:NCBI gene;Acc:396437]
81. FTH FTH 345.65 2272.57
82. ENSGALG00000018386 ENSGALG00000018386 342.26 2250.28
83. MT-ND6 MT-ND6 331.25 2177.89
84. RPL10A ENSGALG00000002644 331.25 2177.89 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
85. HSPA8 ENSGALG00000006512 327.01 2150.01 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
86. HMGN2 HMGN2 313.46 2060.92
87. RPL3 ENSGALG00000012172 304.14 1999.65 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
88. RPL31 ENSGALG00000016775 301.60 1982.95 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
89. RPS24 ENSGALG00000004871 299.06 1966.25 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
90. PRDX1 ENSGALG00000010243 288.89 1899.38 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
91. SLC25A6_1 ENSGALG00000016691 288.89 1899.38 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
92. EEF1D 285.50 1877.09 eukaryotic translation elongation factor 1 delta, transcript variant X13
93. RPS3 ENSGALG00000017330 282.11 1854.81 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
94. RAN ENSGALG00000002569 280.42 1843.69 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
95. AKAP12 ENSGALG00000036240 275.33 1810.23 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
96. TUBB2B ENSGALG00000012821 273.64 1799.12 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
97. MIF ENSGALG00000006326 264.32 1737.84 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
98. RPL22 ENSGALG00000000719 262.63 1726.73 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
99. LDHB ENSGALG00000035836 260.93 1715.55 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
100. DYL1 ENSGALG00000007153 255.85 1682.15 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA