Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_3, section s9.

Sample reads: 124,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4926.37 39659.16
2. MT-ATP6 MT-ATP6 4289.68 34533.56
3. MT-ND5 MT-ND5 3164.14 25472.54
4. MT-CYB MT-CYB 2465.78 19850.47
5. MT-ND4 MT-ND4 2075.00 16704.54
6. MT-CO1 MT-CO1 1816.46 14623.20
7. EEF1A EEF1A 1803.09 14515.56
8. gga-mir-3527 gga-mir-3527 1698.34 13672.29
9. gga-mir-3533 ENSGALG00000027736 1569.07 12631.61 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. GAPDH ENSGALG00000014442 1253.32 10089.71 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. MT-ND1 MT-ND1 1251.09 10071.75
12. PPIA ENSGALG00000028600 933.12 7511.97 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
13. NME2 ENSGALG00000002932 705.78 5681.80 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
14. MT-ND3 MT-ND3 674.58 5430.63
15. RPL5 ENSGALG00000005922 627.03 5047.83 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
16. MDK ENSGALG00000008367 554.97 4467.72 midkine [Source:NCBI gene;Acc:423196]
17. RPL8 ENSGALG00000016232 554.97 4467.72 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
18. EIF4G2 ENSGALG00000005587 518.57 4174.69 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
19. ENSGALG00000018384 ENSGALG00000018384 499.99 4025.11
20. CIRBP ENSGALG00000030918 453.93 3654.31 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
21. ATP6V0C ENSGALG00000009229 452.44 3642.32 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
22. RPS3 ENSGALG00000017330 447.99 3606.49 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
23. RAN ENSGALG00000002569 439.07 3534.68 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
24. RPL7A ENSGALG00000003197 436.10 3510.77 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
25. RPL26 RPL26 413.81 3331.33
26. ENO1 ENSGALG00000002377 395.24 3181.83 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
27. RPL18A 384.84 3098.11 ribosomal protein L18a
28. RPS7 ENSGALG00000016392 381.12 3068.16 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
29. RPL15 ENSGALG00000011290 379.64 3056.25 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
30. RPL7 ENSGALG00000035252 377.41 3038.29 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
31. RPS4 RPS4 353.63 2846.86
32. MT-ND2 MT-ND2 351.41 2828.98
33. STMN1 ENSGALG00000001475 349.92 2816.99 stathmin 1 [Source:NCBI gene;Acc:396057]
34. RPS23 ENSGALG00000015617 346.21 2787.12 ribosomal protein S23
35. RPS27A ENSGALG00000036790 340.26 2739.22 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
36. H3-IX H3-IX 331.35 2667.49
37. RPL27A ENSGALG00000005948 317.97 2559.78 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
38. TMSB4X ENSGALG00000026383 314.26 2529.91 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
39. RPL23 ENSGALG00000001634 310.54 2499.97 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
40. RPL31 ENSGALG00000016775 305.34 2458.10 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
41. H2AFZ ENSGALG00000014023 303.12 2440.23 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
42. LDHB ENSGALG00000035836 297.91 2398.29 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
43. ANP32B ENSGALG00000037483 294.94 2374.38 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
44. RPS16 ENSGALG00000026490 294.94 2374.38 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
45. EEF1B2 ENSGALG00000008590 291.97 2350.47 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
46. SNRPG ENSGALG00000028409 290.49 2338.56 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
47. EIF1 ENSGALG00000028517 289.00 2326.56 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
48. RPL21 ENSGALG00000027035 286.03 2302.65 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
49. HMGN5 ENSGALG00000007131 279.34 2248.79 high mobility group nucleosome binding domain 5, transcript variant X1
50. RPS6 ENSGALG00000015082 279.34 2248.79 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
51. RPS10 ENSGALG00000002813 276.37 2224.88 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
52. RPS20 ENSGALG00000014432 275.63 2218.93 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
53. RPL32 ENSGALG00000027142 274.14 2206.93 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
54. ATP5G3 263.74 2123.21 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
55. RPS12 ENSGALG00000013990 257.80 2075.39 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
56. SLC25A6_1 ENSGALG00000016691 252.60 2033.53 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
57. CRHOA CRHOA 251.11 2021.53
58. ENSGALG00000018386 ENSGALG00000018386 250.37 2015.57
59. FKBP4 ENSGALG00000014331 247.40 1991.66 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
60. RPS24 ENSGALG00000004871 245.17 1973.71 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
61. HNRNPDL ENSGALG00000023199 242.94 1955.76 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
62. ENSGALG00000028992 ENSGALG00000028992 234.77 1889.99
63. RPL35A ENSGALG00000007611, ENSGALG00000041230 233.28 1877.99 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
64. RPS15 ENSGALG00000015195 232.54 1872.04 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
65. RPS11 ENSGALG00000017299 231.79 1866.00 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
66. HMGB2 ENSGALG00000010745 227.34 1830.17 high mobility group box 2 [Source:NCBI gene;Acc:396482]
67. CDK1 ENSGALG00000003085 225.85 1818.18 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
68. EIF4EBP1 ENSGALG00000003205 220.65 1776.32 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
69. RPSA 219.91 1770.36 ribosomal protein SA
70. HMGB1 ENSGALG00000042875 217.68 1752.41 high mobility group box 1 [Source:NCBI gene;Acc:395724]
71. SNRPE ENSGALG00000000137 217.68 1752.41 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
72. BTF3L4 ENSGALG00000010570 215.45 1734.45 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
73. RPL36 ENSGALG00000000474 214.71 1728.50 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
74. RPS29 ENSGALG00000012229 212.48 1710.55 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
75. EIF5A2 ENSGALG00000009309 211.74 1704.59 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
76. MIF ENSGALG00000006326 210.99 1698.55 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
77. CNN3 ENSGALG00000005597 208.76 1680.60 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
78. RPL27 ENSGALG00000002837 208.02 1674.64 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
79. ERH ENSGALG00000017384 207.28 1668.68 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
80. RPLP1 ENSGALG00000030878 206.53 1662.65 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
81. NDUFB9 ENSGALG00000042242 205.79 1656.69 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
82. NONO ENSGALG00000005507 205.05 1650.73 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
83. TCF12 ENSGALG00000004304 203.56 1638.74 transcription factor 12 [Source:NCBI gene;Acc:396334]
84. RPL23A ENSGALG00000003966 202.08 1626.82 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
85. RPL14 ENSGALG00000043379 199.11 1602.91 ribosomal protein L14
86. RPL10A ENSGALG00000002644 196.88 1584.96 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
87. RPS14 ENSGALG00000004588 196.88 1584.96 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
88. RPS15A ENSGALG00000006771 196.13 1578.92 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
89. TPT1 ENSGALG00000028872 195.39 1572.96 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
90. CALM_1 CALM_1 194.65 1567.01
91. RPL29 ENSGALG00000026978 192.42 1549.05 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
92. HMGN2 HMGN2 191.68 1543.10
93. HNRNPA3 ENSGALG00000009250 190.19 1531.10 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
94. RPL4 ENSGALG00000007711 187.96 1513.15 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
95. IGF2BP3 ENSGALG00000010961 186.48 1501.24 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
96. EIF4A3 ENSGALG00000008530 184.99 1489.24 eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:416704]
97. RPL3 ENSGALG00000012172 182.02 1465.33 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
98. PNRC1 ENSGALG00000015780 176.07 1417.43 proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
99. KRT19 ENSGALG00000019719 171.62 1381.61 keratin 19 [Source:NCBI gene;Acc:395861]
100. UQCRFS1 ENSGALG00000025819 170.13 1369.61 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA