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Experiment Chicken_E3_posterior_slice_3, section s32.

Sample reads: 124,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 5850.33 47089.68
2. MT-CO3 MT-CO3 4927.70 39663.38
3. MT-ND5 MT-ND5 3963.13 31899.49
4. MT-CYB MT-CYB 2440.78 19646.00
5. gga-mir-3527 gga-mir-3527 2268.84 18262.04
6. MT-ND4 MT-ND4 2163.99 17418.10
7. EEF1A EEF1A 2008.82 16169.12
8. MT-ND3 MT-ND3 1853.65 14920.15
9. gga-mir-3533 ENSGALG00000027736 1803.33 14515.12 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. MT-ND1 MT-ND1 1631.38 13131.08
11. MT-CO1 MT-CO1 1593.64 12827.31
12. GAPDH ENSGALG00000014442 1258.14 10126.85 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. PPIA ENSGALG00000028600 1182.65 9519.23 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
14. NME2 ENSGALG00000002932 1102.97 8877.88 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. MDK ENSGALG00000008367 620.68 4995.89 midkine [Source:NCBI gene;Acc:423196]
16. RPL5 ENSGALG00000005922 608.10 4894.64 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
17. RPL26 RPL26 591.32 4759.57
18. RPL8 ENSGALG00000016232 570.35 4590.78 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
19. RPS20 ENSGALG00000014432 545.19 4388.27 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
20. RPS7 ENSGALG00000016392 507.45 4084.50 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
21. ENSGALG00000018384 ENSGALG00000018384 503.25 4050.69
22. RPL31 ENSGALG00000016775 499.06 4016.97 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
23. RPL7A ENSGALG00000003197 499.06 4016.97 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
24. RPS3 ENSGALG00000017330 494.87 3983.24 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
25. RPL15 ENSGALG00000011290 482.29 3881.98 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
26. KRT19 ENSGALG00000019719 478.09 3848.18 keratin 19 [Source:NCBI gene;Acc:395861]
27. RPL7 ENSGALG00000035252 478.09 3848.18 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
28. STMN1 ENSGALG00000001475 419.38 3375.62 stathmin 1 [Source:NCBI gene;Acc:396057]
29. RPS6 ENSGALG00000015082 410.99 3308.09 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
30. RPL27A ENSGALG00000005948 406.80 3274.36 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
31. ENO1 ENSGALG00000002377 390.02 3139.30 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
32. RPS27A ENSGALG00000036790 390.02 3139.30 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
33. TMSB4X ENSGALG00000026383 390.02 3139.30 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
34. LUM ENSGALG00000011271 381.63 3071.76 lumican [Source:NCBI gene;Acc:417891]
35. RPL18A 377.44 3038.04 ribosomal protein L18a
36. RPS23 ENSGALG00000015617 373.25 3004.31 ribosomal protein S23
37. RPS16 ENSGALG00000026490 364.86 2936.78 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
38. EEF1B2 ENSGALG00000008590 356.47 2869.25 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
39. RPL23 ENSGALG00000001634 356.47 2869.25 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
40. RPL27 ENSGALG00000002837 348.08 2801.72 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
41. RPS4 RPS4 348.08 2801.72
42. EIF4G2 ENSGALG00000005587 343.89 2767.99 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
43. HBG1 HBG1 343.89 2767.99
44. RPS10 ENSGALG00000002813 343.89 2767.99 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
45. RPLP1 ENSGALG00000030878 318.73 2565.48 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
46. RPL21 ENSGALG00000027035 310.34 2497.95 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
47. RPS11 ENSGALG00000017299 310.34 2497.95 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
48. RPS15A ENSGALG00000006771 310.34 2497.95 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
49. RPS29 ENSGALG00000012229 310.34 2497.95 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
50. HBE 306.15 2464.22 hemoglobin subunit epsilon
51. RPL32 ENSGALG00000027142 301.95 2430.42 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
52. ENSGALG00000028992 ENSGALG00000028992 297.76 2396.69
53. SLC25A6_1 ENSGALG00000016691 297.76 2396.69 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
54. ENSGALG00000018386 ENSGALG00000018386 293.57 2362.96
55. RPS15 ENSGALG00000015195 293.57 2362.96 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
56. RPL14 ENSGALG00000043379 289.37 2329.16 ribosomal protein L14
57. NDUFB9 ENSGALG00000042242 280.98 2261.63 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
58. RPL35A ENSGALG00000007611, ENSGALG00000041230 276.79 2227.90 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
59. RPSA 272.60 2194.17 ribosomal protein SA
60. RPL12 ENSGALG00000008806 268.40 2160.37 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
61. MT-ND2 MT-ND2 264.21 2126.64
62. RPL23A ENSGALG00000003966 264.21 2126.64 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
63. RPL38 ENSGALG00000001465 264.21 2126.64 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
64. ATP5G3 260.01 2092.84 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
65. RPL10A ENSGALG00000002644 255.82 2059.11 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
66. RPL3 ENSGALG00000012172 255.82 2059.11 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
67. RPL36 ENSGALG00000000474 255.82 2059.11 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
68. CRHOA CRHOA 251.63 2025.39
69. H3-IX H3-IX 251.63 2025.39
70. RPL13 ENSGALG00000006179 251.63 2025.39 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
71. RPL6 ENSGALG00000004818 247.43 1991.58 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
72. RPS12 ENSGALG00000013990 243.24 1957.85 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
73. FKBP4 ENSGALG00000014331 239.05 1924.13 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
74. TPT1 ENSGALG00000028872 239.05 1924.13 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
75. ATP6V0C ENSGALG00000009229 234.85 1890.32 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
76. EIF4EBP1 ENSGALG00000003205 234.85 1890.32 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
77. ENSGALG00000002696 ENSGALG00000002696 234.85 1890.32
78. RAN ENSGALG00000002569 234.85 1890.32 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
79. RPL4 ENSGALG00000007711 234.85 1890.32 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
80. EIF3F ENSGALG00000005326 230.66 1856.60 eukaryotic translation initiation factor 3 subunit F
81. HBZ ENSGALG00000023740 230.66 1856.60 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
82. RPS24 ENSGALG00000004871 230.66 1856.60 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
83. S100A11 ENSGALG00000036711 230.66 1856.60 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
84. CIRBP ENSGALG00000030918 226.46 1822.79 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
85. RPS14 ENSGALG00000004588 226.46 1822.79 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
86. CALM CALM 222.27 1789.07
87. PNRC1 ENSGALG00000015780 222.27 1789.07 proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
88. RPL29 ENSGALG00000026978 222.27 1789.07 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
89. NONO ENSGALG00000005507 218.08 1755.34 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
90. RPL37 ENSGALG00000014833 213.88 1721.53 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
91. RPS3A ENSGALG00000010077 209.69 1687.81 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
92. EEF1D 205.50 1654.08 eukaryotic translation elongation factor 1 delta, transcript variant X13
93. RPS8 ENSGALG00000010124 201.30 1620.28 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
94. EIF1 ENSGALG00000028517 197.11 1586.55 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
95. HMGN2 HMGN2 197.11 1586.55
96. CNN3 ENSGALG00000005597 192.91 1552.75 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
97. ERH ENSGALG00000017384 188.72 1519.02 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
98. TXN ENSGALG00000015704 188.72 1519.02 thioredoxin [Source:NCBI gene;Acc:396437]
99. LDHB ENSGALG00000035836 184.53 1485.29 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
100. RPS21 ENSGALG00000005338 184.53 1485.29 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA