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Experiment Chicken_E3_posterior_slice_3, section s15.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4078.18 32827.93
2. MT-ATP6 MT-ATP6 3708.62 29853.10
3. MT-ND5 MT-ND5 2862.20 23039.71
4. EEF1A EEF1A 1942.09 15633.15
5. MT-CYB MT-CYB 1912.83 15397.62
6. gga-mir-3527 gga-mir-3527 1896.58 15266.81
7. MT-CO1 MT-CO1 1691.75 13618.00
8. gga-mir-3533 ENSGALG00000027736 1533.52 12344.30 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. GAPDH ENSGALG00000014442 1521.60 12248.35 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. MT-ND4 MT-ND4 1369.87 11026.98
11. MT-ND3 MT-ND3 1262.58 10163.33
12. MT-ND1 MT-ND1 1238.74 9971.43
13. PPIA ENSGALG00000028600 1148.78 9247.28 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
14. NME2 ENSGALG00000002932 1023.07 8235.36 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. RPL5 ENSGALG00000005922 726.12 5845.01 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
16. RPS3 ENSGALG00000017330 605.82 4876.64 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
17. RPL8 ENSGALG00000016232 579.81 4667.27 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
18. RPL18A 551.63 4440.43 ribosomal protein L18a
19. RPL26 RPL26 516.95 4161.27
20. CIRBP ENSGALG00000030918 484.44 3899.57 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
21. RPL15 ENSGALG00000011290 475.77 3829.78 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
22. MDK ENSGALG00000008367 470.35 3786.15 midkine [Source:NCBI gene;Acc:423196]
23. RPL27A ENSGALG00000005948 469.27 3777.46 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
24. RPL7 ENSGALG00000035252 463.85 3733.83 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
25. RPL7A ENSGALG00000003197 462.76 3725.06 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
26. EIF4G2 ENSGALG00000005587 435.67 3506.99 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
27. ENO1 ENSGALG00000002377 435.67 3506.99 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
28. RPS23 ENSGALG00000015617 425.92 3428.51 ribosomal protein S23
29. STMN1 ENSGALG00000001475 422.67 3402.35 stathmin 1 [Source:NCBI gene;Acc:396057]
30. RPS7 ENSGALG00000016392 420.50 3384.88 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
31. RPS20 ENSGALG00000014432 415.08 3341.25 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
32. RPS11 ENSGALG00000017299 409.66 3297.62 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
33. ENSGALG00000018384 ENSGALG00000018384 406.41 3271.46
34. RPS10 ENSGALG00000002813 399.91 3219.14 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
35. RAN ENSGALG00000002569 380.40 3062.09 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
36. RPS4 RPS4 378.23 3044.62
37. ATP6V0C ENSGALG00000009229 377.15 3035.93 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
38. H3-IX H3-IX 372.81 3000.99
39. RPL31 ENSGALG00000016775 368.48 2966.14 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
40. RPL23 ENSGALG00000001634 360.89 2905.04 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
41. RPS27A ENSGALG00000036790 350.05 2817.78 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
42. RPS16 ENSGALG00000026490 345.72 2782.93 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPS6 ENSGALG00000015082 345.72 2782.93 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
44. H2AFZ ENSGALG00000014023 344.63 2774.15 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
45. HBE 339.22 2730.60 hemoglobin subunit epsilon
46. MT-ND2 MT-ND2 330.55 2660.81
47. RPS29 ENSGALG00000012229 308.87 2486.30 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
48. RPL23A ENSGALG00000003966 305.62 2460.13 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
49. EIF1 ENSGALG00000028517 303.45 2442.67 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
50. TMSB4X ENSGALG00000026383 302.37 2433.97 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
51. HMGN5 ENSGALG00000007131 299.12 2407.81 high mobility group nucleosome binding domain 5, transcript variant X1
52. ATP5G3 292.61 2355.41 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
53. EEF1B2 ENSGALG00000008590 290.45 2338.02 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
54. RPL38 ENSGALG00000001465 290.45 2338.02 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
55. SNRPG ENSGALG00000028409 288.28 2320.55 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
56. RPL27 ENSGALG00000002837 286.11 2303.09 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
57. RPL32 ENSGALG00000027142 280.69 2259.46 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
58. SLC25A6_1 ENSGALG00000016691 280.69 2259.46 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
59. FKBP4 ENSGALG00000014331 278.53 2242.07 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
60. RPL35A ENSGALG00000007611, ENSGALG00000041230 273.11 2198.44 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
61. RPS12 ENSGALG00000013990 272.02 2189.67 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
62. RPL14 ENSGALG00000043379 269.86 2172.28 ribosomal protein L14
63. RPL36 ENSGALG00000000474 268.77 2163.51 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
64. RPSA 268.77 2163.51 ribosomal protein SA
65. RPL21 ENSGALG00000027035 267.69 2154.81 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
66. RPS14 ENSGALG00000004588 264.44 2128.65 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
67. RPS24 ENSGALG00000004871 257.93 2076.25 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
68. NDUFB9 ENSGALG00000042242 249.26 2006.46 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
69. HBG1 HBG1 246.01 1980.29
70. ANP32B ENSGALG00000037483 243.85 1962.91 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
71. RPL29 ENSGALG00000026978 242.76 1954.13 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
72. EIF4EBP1 ENSGALG00000003205 236.26 1901.81 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
73. ERH ENSGALG00000017384 235.18 1893.12 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
74. MIF ENSGALG00000006326 234.09 1884.34 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
75. ENSGALG00000028992 ENSGALG00000028992 233.01 1875.65
76. CDK1 ENSGALG00000003085 228.67 1840.71 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
77. RPS3A ENSGALG00000010077 227.59 1832.02 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
78. CRHOA CRHOA 226.51 1823.33
79. ENSGALG00000018386 ENSGALG00000018386 226.51 1823.33
80. EIF5A2 ENSGALG00000009309 224.34 1805.86 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
81. RPL10A ENSGALG00000002644 221.09 1779.70 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
82. RPL4 ENSGALG00000007711 220.00 1770.92 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
83. ENSGALG00000002696 ENSGALG00000002696 217.84 1753.54
84. HMGN2 HMGN2 217.84 1753.54
85. RPS15A ENSGALG00000006771 217.84 1753.54 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
86. LDHB ENSGALG00000035836 216.75 1744.76 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
87. RPL6 ENSGALG00000004818 213.50 1718.60 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
88. KRT19 ENSGALG00000019719 212.42 1709.91 keratin 19 [Source:NCBI gene;Acc:395861]
89. RPLP1 ENSGALG00000030878 211.33 1701.13 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
90. HBZ ENSGALG00000023740 210.25 1692.44 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
91. RPL12 ENSGALG00000008806 210.25 1692.44 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
92. TPT1 ENSGALG00000028872 208.08 1674.97 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
93. HNRNPDL ENSGALG00000023199 205.91 1657.50 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
94. RPS15 ENSGALG00000015195 204.83 1648.81 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
95. RPS21 ENSGALG00000005338 196.16 1579.02 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
96. RPL13 ENSGALG00000006179 192.91 1552.86 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
97. HMGB2 ENSGALG00000010745 191.83 1544.16 high mobility group box 2 [Source:NCBI gene;Acc:396482]
98. RPL3 ENSGALG00000012172 188.57 1517.92 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
99. SNRPE ENSGALG00000000137 185.32 1491.76 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
100. PRDX1 ENSGALG00000010243 183.16 1474.37 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA