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Experiment Chicken_E3_posterior_slice_1, section s33.

Sample reads: 124,245. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 8094.09 65150.94
2. MT-ATP6 MT-ATP6 4324.63 34809.81
3. MT-CYB MT-CYB 2753.18 22160.89
4. RPLP1 ENSGALG00000030878 1630.24 13122.13 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. MT-ND6 MT-ND6 1599.16 12871.96
6. MT-ND5 MT-ND5 1493.34 12020.19
7. MT-ND4 MT-ND4 1232.13 9917.66
8. EEF1A EEF1A 1225.41 9863.57
9. RPS10 ENSGALG00000002813 1145.62 9221.32 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. MT-CO1 MT-CO1 1107.82 8917.06
11. RPS3A ENSGALG00000010077 1085.15 8734.59 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
12. RPS12 ENSGALG00000013990 895.33 7206.69 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
13. gga-mir-3527 gga-mir-3527 889.45 7159.36
14. RPLP0 ENSGALG00000023294 878.53 7071.46 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
15. RPS29 ENSGALG00000012229 870.97 7010.61 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
16. MT-ND1 MT-ND1 788.66 6348.08
17. RPS8 ENSGALG00000010124 771.87 6212.94 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
18. RPL15 ENSGALG00000011290 770.19 6199.41 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
19. RPS21 ENSGALG00000005338 746.67 6010.10 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
20. RPL35A ENSGALG00000007611, ENSGALG00000041230 685.36 5516.60 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
21. RPL26 RPL26 662.68 5334.04
22. RPL23 ENSGALG00000001634 660.16 5313.76 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
23. TMSB4X ENSGALG00000026383 654.28 5266.43 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
24. GAPDH ENSGALG00000014442 645.04 5192.06 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
25. RPL4 ENSGALG00000007711 634.12 5104.16 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
26. RPL36AL ENSGALG00000004952 632.44 5090.64 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
27. RPL8 ENSGALG00000016232 616.48 4962.17 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
28. RPS23 ENSGALG00000015617 606.41 4881.11 ribosomal protein S23
29. RPL27 ENSGALG00000002837 604.73 4867.59 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
30. RPL14 ENSGALG00000043379 599.69 4827.02 ribosomal protein L14
31. RPLP2 ENSGALG00000034811 586.25 4718.84 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
32. MT-ND3 MT-ND3 585.41 4712.08
33. RPL13 ENSGALG00000006179 580.37 4671.51 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
34. RPL38 ENSGALG00000001465 572.81 4610.66 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
35. RPL7A ENSGALG00000003197 529.97 4265.83 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
36. RPL23A ENSGALG00000003966 526.62 4238.87 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
37. RPS15A ENSGALG00000006771 503.10 4049.55 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. gga-mir-3533 ENSGALG00000027736 501.42 4036.03 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
39. RPL27A ENSGALG00000005948 493.02 3968.42 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
40. RPL29 ENSGALG00000026978 477.06 3839.95 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. RPL37 ENSGALG00000014833 477.06 3839.95 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
42. RPL18A 466.98 3758.82 ribosomal protein L18a
43. RPL19 ENSGALG00000001658 463.62 3731.77 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
44. HMGB2 ENSGALG00000010745 453.54 3650.63 high mobility group box 2 [Source:NCBI gene;Acc:396482]
45. RPS14 ENSGALG00000004588 452.70 3643.87 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
46. PPIA ENSGALG00000028600 451.86 3637.11 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
47. RPS15 ENSGALG00000015195 426.67 3434.35 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
48. RPL6 ENSGALG00000004818 416.59 3353.22 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
49. RPL35 ENSGALG00000035677 410.71 3305.89 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
50. RPS4 RPS4 409.03 3292.36
51. MDK ENSGALG00000008367 403.15 3245.03 midkine [Source:NCBI gene;Acc:423196]
52. RPSA 397.27 3197.71 ribosomal protein SA
53. RPS25 ENSGALG00000007699 386.35 3109.81 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
54. RPS2 ENSGALG00000005490 384.67 3096.29 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
55. RPS13 ENSGALG00000006096 382.99 3082.76 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
56. RPS20 ENSGALG00000014432 372.91 3001.63 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
57. RPL12 ENSGALG00000008806 370.39 2981.34 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
58. RPL21 ENSGALG00000027035 366.20 2947.62 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
59. RPS7 ENSGALG00000016392 360.32 2900.29 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
60. RPL31 ENSGALG00000016775 340.16 2738.02 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
61. ATP5G3 338.48 2724.49 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
62. RAN ENSGALG00000002569 337.64 2717.73 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
63. RPS16 ENSGALG00000026490 325.88 2623.07 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
64. NME2 ENSGALG00000002932 322.52 2596.03 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
65. RPS27A ENSGALG00000036790 315.80 2541.94 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
66. RPL32 ENSGALG00000027142 310.76 2501.37 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
67. RPS24 ENSGALG00000004871 310.76 2501.37 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
68. RPL36 ENSGALG00000000474 296.48 2386.43 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
69. RPS6 ENSGALG00000015082 293.12 2359.38 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
70. RPL7 ENSGALG00000035252 290.60 2339.10 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
71. TCEB3 ENSGALG00000034625 290.60 2339.10 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
72. RPL10A ENSGALG00000002644 283.05 2278.33 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
73. ACTG1_1 ENSGALG00000001381 277.17 2231.00 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
74. SNRPD1 ENSGALG00000041334 274.65 2210.71 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
75. HMGN2 HMGN2 271.29 2183.67
76. ANP32B ENSGALG00000037483 269.61 2170.14 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
77. RPS11 ENSGALG00000017299 269.61 2170.14 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
78. CIRBP ENSGALG00000030918 267.09 2149.86 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
79. RPL24 ENSGALG00000015339 265.41 2136.34 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
80. STMN1 ENSGALG00000001475 264.57 2129.58 stathmin 1 [Source:NCBI gene;Acc:396057]
81. ENSGALG00000028649 ENSGALG00000028649 262.05 2109.29
82. RPL5 ENSGALG00000005922 259.53 2089.01 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
83. EEF1D 254.49 2048.44 eukaryotic translation elongation factor 1 delta, transcript variant X13
84. RPS28 ENSGALG00000024398 251.97 2028.16 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
85. RPS3 ENSGALG00000017330 251.13 2021.40 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
86. GNB2L1 ENSGALG00000000122 249.45 2007.87 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
87. ENSGALG00000028992 ENSGALG00000028992 244.41 1967.30
88. ENSGALG00000002696 ENSGALG00000002696 239.37 1926.74
89. TXN ENSGALG00000015704 229.29 1845.60 thioredoxin [Source:NCBI gene;Acc:396437]
90. RPL9 ENSGALG00000000150 221.73 1784.75 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
91. ITGB1BP3 ENSGALG00000030120 216.69 1744.18 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
92. GPX1 ENSGALG00000028204 215.01 1730.66 glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
93. RPS17 ENSGALG00000002157 198.22 1595.51 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
94. EEF1B2 ENSGALG00000008590 195.70 1575.23 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
95. RPL3 ENSGALG00000012172 193.18 1554.94 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
96. ENO1 ENSGALG00000002377 190.66 1534.66 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
97. RPL22 ENSGALG00000000719 189.82 1527.90 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
98. SHFM1 SHFM1 188.98 1521.14
99. CRHOA CRHOA 178.06 1433.24
100. TPT1 ENSGALG00000028872 173.02 1392.67 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA