Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_1, section s32.

Sample reads: 124,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 9775.98 78689.63
2. MT-ATP6 MT-ATP6 4089.57 32918.11
3. MT-CYB MT-CYB 2196.10 17677.03
4. RPLP1 ENSGALG00000030878 1593.25 12824.52 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. EEF1A EEF1A 1345.65 10831.52
6. MT-ND6 MT-ND6 1293.02 10407.88
7. MT-ND5 MT-ND5 1285.84 10350.09
8. MT-ND4 MT-ND4 1184.17 9531.72
9. RPS3A ENSGALG00000010077 1149.48 9252.49 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
10. RPS10 ENSGALG00000002813 1148.29 9242.91 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. MT-CO1 MT-CO1 1096.85 8828.86
12. gga-mir-3527 gga-mir-3527 1032.26 8308.95
13. RPS8 ENSGALG00000010124 1014.32 8164.55 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. RPLP0 ENSGALG00000023294 843.27 6787.72 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
15. RPS29 ENSGALG00000012229 799.02 6431.54 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
16. RPL35A ENSGALG00000007611, ENSGALG00000041230 793.03 6383.32 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
17. RPL15 ENSGALG00000011290 781.07 6287.05 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
18. GAPDH ENSGALG00000014442 779.88 6277.48 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
19. RPS12 ENSGALG00000013990 764.33 6152.31 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
20. RPL38 ENSGALG00000001465 761.94 6133.07 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
21. ENSGALG00000018384 ENSGALG00000018384 746.39 6007.90
22. RPL23 ENSGALG00000001634 626.77 5045.05 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
23. RPL23A ENSGALG00000003966 596.87 4804.38 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
24. RPL6 ENSGALG00000004818 569.36 4582.94 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
25. TMSB4X ENSGALG00000026383 569.36 4582.94 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
26. RPL14 ENSGALG00000043379 564.57 4544.38 ribosomal protein L14
27. RPLP2 ENSGALG00000034811 564.57 4544.38 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
28. RPS21 ENSGALG00000005338 541.85 4361.50 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
29. RPL7A ENSGALG00000003197 538.26 4332.61 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
30. RPL8 ENSGALG00000016232 538.26 4332.61 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
31. RPS14 ENSGALG00000004588 534.67 4303.71 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
32. RPL29 ENSGALG00000026978 514.34 4140.07 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
33. RPL32 ENSGALG00000027142 509.55 4101.51 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
34. RPL36AL ENSGALG00000004952 505.96 4072.62 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
35. RPL4 ENSGALG00000007711 503.57 4053.38 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
36. RPS15A ENSGALG00000006771 503.57 4053.38 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
37. MT-ND3 MT-ND3 502.37 4043.72
38. RPL35 ENSGALG00000035677 499.98 4024.48 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
39. RPS4 RPS4 486.83 3918.63
40. RPL27 ENSGALG00000002837 485.63 3908.97 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
41. gga-mir-3533 ENSGALG00000027736 477.26 3841.60 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
42. RPL26 RPL26 473.67 3812.70
43. RPL27A ENSGALG00000005948 473.67 3812.70 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
44. RPL18A 468.88 3774.15 ribosomal protein L18a
45. RPL19 ENSGALG00000001658 450.94 3629.74 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
46. RPS23 ENSGALG00000015617 443.76 3571.95 ribosomal protein S23
47. RPS7 ENSGALG00000016392 421.04 3389.07 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
48. MT-ND1 MT-ND1 418.65 3369.83
49. RPL31 ENSGALG00000016775 413.86 3331.28 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
50. RPL21 ENSGALG00000027035 397.12 3196.53 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
51. RPS25 ENSGALG00000007699 393.53 3167.63 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
52. RPS16 ENSGALG00000026490 389.94 3138.74 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
53. NME2 ENSGALG00000002932 387.55 3119.50 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
54. PPIA ENSGALG00000028600 382.76 3080.94 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
55. RPL12 ENSGALG00000008806 382.76 3080.94 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
56. ATP5G3 377.98 3042.47 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
57. RPS20 ENSGALG00000014432 377.98 3042.47 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
58. RPSA 374.39 3013.57 ribosomal protein SA
59. RPS15 ENSGALG00000015195 370.80 2984.67 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
60. RPS11 ENSGALG00000017299 363.62 2926.88 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
61. MDK ENSGALG00000008367 355.25 2859.51 midkine [Source:NCBI gene;Acc:423196]
62. RPL13 ENSGALG00000006179 346.88 2792.14 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
63. RPS27A ENSGALG00000036790 346.88 2792.14 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
64. RPS2 ENSGALG00000005490 344.49 2772.90 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
65. RPS13 ENSGALG00000006096 334.92 2695.87 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
66. STMN1 ENSGALG00000001475 309.80 2493.67 stathmin 1 [Source:NCBI gene;Acc:396057]
67. RPS24 ENSGALG00000004871 295.44 2378.08 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
68. RAN ENSGALG00000002569 291.86 2349.26 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
69. RPS6 ENSGALG00000015082 291.86 2349.26 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
70. RPL24 ENSGALG00000015339 289.46 2329.95 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
71. HMGN2 HMGN2 282.29 2272.23
72. RPL37 ENSGALG00000014833 272.72 2195.20 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
73. MT-ND2 MT-ND2 271.52 2185.54
74. RPL5 ENSGALG00000005922 269.13 2166.30 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
75. TCEB3 ENSGALG00000034625 269.13 2166.30 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
76. EEF1B2 ENSGALG00000008590 267.93 2156.64 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
77. EEF1D 266.74 2147.07 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. RPS28 ENSGALG00000024398 265.54 2137.41 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
79. RPS3 ENSGALG00000017330 263.15 2118.17 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
80. RPL7 ENSGALG00000035252 258.36 2079.61 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
81. RPL9 ENSGALG00000000150 257.17 2070.03 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
82. ENSGALG00000018386 ENSGALG00000018386 255.97 2060.38
83. HMGB2 ENSGALG00000010745 254.78 2050.80 high mobility group box 2 [Source:NCBI gene;Acc:396482]
84. GNB2L1 ENSGALG00000000122 249.99 2012.24 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
85. ENSGALG00000002696 ENSGALG00000002696 246.40 1983.34
86. ACTG1_1 ENSGALG00000001381 245.21 1973.76 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
87. ENSGALG00000028992 ENSGALG00000028992 245.21 1973.76
88. SNRPD1 ENSGALG00000041334 244.01 1964.11 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
89. TXN ENSGALG00000015704 239.23 1925.63 thioredoxin [Source:NCBI gene;Acc:396437]
90. ANP32B ENSGALG00000037483 238.03 1915.97 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
91. ENSGALG00000028649 ENSGALG00000028649 234.44 1887.07
92. CIRBP ENSGALG00000030918 223.68 1800.46 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
93. H3-IX_1 H3-IX_1 223.68 1800.46
94. RPL3 ENSGALG00000012172 221.28 1781.15 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
95. RPL10A ENSGALG00000002644 220.09 1771.57 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
96. ENO1 ENSGALG00000002377 215.30 1733.01 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
97. RPL36 ENSGALG00000000474 215.30 1733.01 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
98. RPS17 ENSGALG00000002157 214.11 1723.43 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
99. GPX1 ENSGALG00000028204 209.32 1684.88 glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
100. CRHOA CRHOA 204.54 1646.40
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA