Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_1, section s28.

Sample reads: 124,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 13728.06 110506.70
2. MT-ATP6 MT-ATP6 2493.65 20073.12
3. MT-CYB MT-CYB 1714.38 13800.24
4. RPLP1 ENSGALG00000030878 1623.47 13068.44 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. EEF1A EEF1A 1495.45 12037.92
6. ENSGALG00000018384 ENSGALG00000018384 1430.51 11515.17
7. RPS10 ENSGALG00000002813 1358.15 10932.69 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. MT-ND4 MT-ND4 1090.97 8781.98
9. RPS3A ENSGALG00000010077 1090.97 8781.98 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
10. MT-CO1 MT-CO1 1039.02 8363.79
11. RPS29 ENSGALG00000012229 948.11 7632.00 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
12. RPLP0 ENSGALG00000023294 914.71 7363.14 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
13. MT-ND6 MT-ND6 894.30 7198.84
14. MT-ND5 MT-ND5 873.89 7034.55
15. GAPDH ENSGALG00000014442 823.80 6631.34 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. RPL35A ENSGALG00000007611, ENSGALG00000041230 823.80 6631.34 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
17. RPL38 ENSGALG00000001465 818.23 6586.50 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
18. RPS8 ENSGALG00000010124 786.69 6332.62 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
19. RPS12 ENSGALG00000013990 784.83 6317.64 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
20. RPS21 ENSGALG00000005338 758.86 6108.59 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
21. RPL6 ENSGALG00000004818 740.30 5959.19 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
22. gga-mir-3527 gga-mir-3527 719.89 5794.90
23. RPL15 ENSGALG00000011290 710.62 5720.27 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
24. RPL29 ENSGALG00000026978 688.35 5541.01 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
25. RPL7A ENSGALG00000003197 684.64 5511.14 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
26. RPL26 RPL26 654.95 5272.15
27. RPL8 ENSGALG00000016232 649.39 5227.39 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
28. RPLP2 ENSGALG00000034811 645.68 5197.53 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
29. RPL23 ENSGALG00000001634 638.26 5137.80 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
30. RPL27 ENSGALG00000002837 621.56 5003.37 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
31. RPL14 ENSGALG00000043379 608.57 4898.80 ribosomal protein L14
32. RPS15A ENSGALG00000006771 593.73 4779.35 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
33. RPL23A ENSGALG00000003966 586.30 4719.54 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
34. RPSA 584.45 4704.64 ribosomal protein SA
35. MT-ND3 MT-ND3 578.88 4659.81
36. RPL18A 551.05 4435.78 ribosomal protein L18a
37. RPS14 ENSGALG00000004588 549.20 4420.89 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
38. RPS23 ENSGALG00000015617 536.21 4316.33 ribosomal protein S23
39. RPL32 ENSGALG00000027142 528.79 4256.60 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
40. RPL27A ENSGALG00000005948 513.94 4137.06 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
41. RPL35 ENSGALG00000035677 500.96 4032.58 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
42. RPS4 RPS4 499.10 4017.60
43. RPS7 ENSGALG00000016392 499.10 4017.60 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
44. RPL36AL ENSGALG00000004952 495.39 3987.74 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
45. RPL19 ENSGALG00000001658 487.97 3928.01 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
46. TMSB4X ENSGALG00000026383 465.70 3748.74 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
47. RPS20 ENSGALG00000014432 456.43 3674.12 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
48. RPS25 ENSGALG00000007699 456.43 3674.12 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
49. STMN1 ENSGALG00000001475 424.89 3420.24 stathmin 1 [Source:NCBI gene;Acc:396057]
50. RPL31 ENSGALG00000016775 417.46 3360.43 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
51. ENSGALG00000018386 ENSGALG00000018386 404.48 3255.94
52. RPS11 ENSGALG00000017299 402.62 3240.97 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
53. NME2 ENSGALG00000002932 391.49 3151.38 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
54. RPS16 ENSGALG00000026490 391.49 3151.38 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. EEF1D 385.92 3106.54 eukaryotic translation elongation factor 1 delta, transcript variant X13
56. EEF1B2 ENSGALG00000008590 384.07 3091.65 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
57. PPIA ENSGALG00000028600 382.21 3076.67 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
58. RPL37 ENSGALG00000014833 382.21 3076.67 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
59. RPS15 ENSGALG00000015195 378.50 3046.81 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
60. RPL13 ENSGALG00000006179 374.79 3016.95 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
61. ATP5G3 372.93 3001.97 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
62. RPL21 ENSGALG00000027035 365.51 2942.24 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
63. RPS24 ENSGALG00000004871 365.51 2942.24 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
64. RPL4 ENSGALG00000007711 359.95 2897.49 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
65. RPL24 ENSGALG00000015339 343.25 2763.06 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
66. RPL5 ENSGALG00000005922 343.25 2763.06 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
67. TCEB3 ENSGALG00000034625 343.25 2763.06 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
68. MT-ND2 MT-ND2 339.54 2733.19
69. RPS13 ENSGALG00000006096 317.27 2553.93 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
70. RPL12 ENSGALG00000008806 315.42 2539.03 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
71. RPS27A ENSGALG00000036790 315.42 2539.03 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
72. RPS2 ENSGALG00000005490 313.56 2524.06 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
73. MDK ENSGALG00000008367 296.86 2389.63 midkine [Source:NCBI gene;Acc:423196]
74. RPS3 ENSGALG00000017330 289.44 2329.90 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
75. RPL7 ENSGALG00000035252 283.88 2285.15 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
76. ENSGALG00000028649 ENSGALG00000028649 270.89 2180.58
77. MT-ND1 MT-ND1 270.89 2180.58
78. ENSGALG00000002696 ENSGALG00000002696 269.03 2165.61
79. gga-mir-3533 ENSGALG00000027736 265.32 2135.75 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
80. ENSGALG00000028992 ENSGALG00000028992 263.47 2120.85
81. TXN ENSGALG00000015704 263.47 2120.85 thioredoxin [Source:NCBI gene;Acc:396437]
82. RPL10A ENSGALG00000002644 257.90 2076.02 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
83. RPS6 ENSGALG00000015082 243.06 1956.56 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
84. HMGN5 ENSGALG00000007131 237.49 1911.72 high mobility group nucleosome binding domain 5, transcript variant X1
85. ACTG1_1 ENSGALG00000001381 235.64 1896.83 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
86. H3-IX H3-IX 228.21 1837.02
87. CIRBP ENSGALG00000030918 224.50 1807.16 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
88. RPS17 ENSGALG00000002157 222.65 1792.26 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
89. GNB2L1 ENSGALG00000000122 220.79 1777.29 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
90. TPT1 ENSGALG00000028872 220.79 1777.29 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
91. RAN ENSGALG00000002569 218.94 1762.40 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
92. COX7C ENSGALG00000027963 217.08 1747.43 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
93. SNRPG ENSGALG00000028409 217.08 1747.43 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
94. RPL36 ENSGALG00000000474 213.37 1717.56 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
95. RPL9 ENSGALG00000000150 207.80 1672.73 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
96. RPL22 ENSGALG00000000719 205.95 1657.83 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
97. RPL30 ENSGALG00000029897 200.38 1613.00 ribosomal protein L30 [Source:NCBI gene;Acc:425416]
98. RPL22L1 ENSGALG00000009312 196.67 1583.13 ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
99. HMGN2 HMGN2 187.39 1508.43
100. SEC61G ENSGALG00000037863 187.39 1508.43 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA