Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_1, section s23.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 7020.38 56510.66
2. MT-ATP6 MT-ATP6 2975.18 23948.76
3. MT-CYB MT-CYB 2181.53 17560.26
4. EEF1A EEF1A 1765.30 14209.81
5. RPLP1 ENSGALG00000030878 1646.86 13256.43 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
6. MT-ND4 MT-ND4 1395.24 11231.01
7. MT-ND6 MT-ND6 1247.35 10040.56
8. RPS10 ENSGALG00000002813 1171.74 9431.94 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPS3A ENSGALG00000010077 1032.55 8311.53 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
10. MT-CO1 MT-CO1 986.37 7939.80
11. gga-mir-3527 gga-mir-3527 982.36 7907.52
12. RPS29 ENSGALG00000012229 977.01 7864.46 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
13. MT-ND5 MT-ND5 928.15 7471.16
14. RPS8 ENSGALG00000010124 894.70 7201.90 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
15. RPL35A ENSGALG00000007611, ENSGALG00000041230 859.23 6916.39 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
16. RPLP0 ENSGALG00000023294 835.14 6722.47 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
17. RPL15 ENSGALG00000011290 779.60 6275.40 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
18. GAPDH ENSGALG00000014442 778.26 6264.62 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
19. RPS12 ENSGALG00000013990 750.15 6038.34 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
20. RPL27 ENSGALG00000002837 654.46 5268.09 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
21. RPL38 ENSGALG00000001465 649.11 5225.02 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
22. RPLP2 ENSGALG00000034811 637.73 5133.42 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
23. MT-ND3 MT-ND3 618.32 4977.18
24. RPL8 ENSGALG00000016232 608.96 4901.83 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
25. RPL23 ENSGALG00000001634 605.61 4874.87 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
26. RPS21 ENSGALG00000005338 596.24 4799.44 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
27. RPL7A ENSGALG00000003197 558.10 4492.43 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
28. RPL23A ENSGALG00000003966 552.07 4443.90 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
29. RPL29 ENSGALG00000026978 549.40 4422.40 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
30. RPL4 ENSGALG00000007711 544.71 4384.65 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
31. RPL36AL ENSGALG00000004952 528.65 4255.38 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
32. RPL6 ENSGALG00000004818 525.98 4233.88 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
33. ENSGALG00000018384 ENSGALG00000018384 511.92 4120.71
34. RPL26 RPL26 505.23 4066.86
35. RPL18A 503.89 4056.07 ribosomal protein L18a
36. RPS15A ENSGALG00000006771 498.54 4013.01 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
37. RPL19 ENSGALG00000001658 497.87 4007.61 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
38. RPS14 ENSGALG00000004588 491.18 3953.76 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
39. RPS23 ENSGALG00000015617 486.49 3916.01 ribosomal protein S23
40. RPL27A ENSGALG00000005948 473.78 3813.70 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
41. TMSB4X ENSGALG00000026383 469.77 3781.42 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
42. MT-ND1 MT-ND1 465.08 3743.67
43. RPL14 ENSGALG00000043379 465.08 3743.67 ribosomal protein L14
44. RPL32 ENSGALG00000027142 464.41 3738.28 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
45. RPS4 RPS4 462.40 3722.10
46. RPS25 ENSGALG00000007699 444.34 3576.72 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
47. RPL13 ENSGALG00000006179 433.63 3490.51 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
48. PPIA ENSGALG00000028600 430.95 3468.94 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
49. gga-mir-3533 ENSGALG00000027736 420.92 3388.20 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
50. RPL37 ENSGALG00000014833 406.86 3275.03 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
51. ATP5G3 406.19 3269.63 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
52. HMGB2 ENSGALG00000010745 389.46 3134.96 high mobility group box 2 [Source:NCBI gene;Acc:396482]
53. RPL31 ENSGALG00000016775 387.46 3118.87 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
54. RPL12 ENSGALG00000008806 386.12 3108.08 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
55. RPL35 ENSGALG00000035677 375.41 3021.87 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
56. RPL21 ENSGALG00000027035 368.72 2968.02 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
57. RPS24 ENSGALG00000004871 368.05 2962.62 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
58. RPS15 ENSGALG00000015195 365.37 2941.05 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
59. RPSA 365.37 2941.05 ribosomal protein SA
60. RPS11 ENSGALG00000017299 358.01 2881.81 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
61. RPS7 ENSGALG00000016392 357.34 2876.41 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. RPS13 ENSGALG00000006096 352.66 2838.74 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
63. RPS2 ENSGALG00000005490 339.28 2731.04 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
64. RPS6 ENSGALG00000015082 338.61 2725.65 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
65. RPS20 ENSGALG00000014432 337.94 2720.25 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
66. NME2 ENSGALG00000002932 334.59 2693.29 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
67. TCEB3 ENSGALG00000034625 333.92 2687.89 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
68. RPL5 ENSGALG00000005922 333.25 2682.50 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
69. RAN ENSGALG00000002569 329.24 2650.22 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
70. RPS16 ENSGALG00000026490 327.90 2639.44 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
71. RPS28 ENSGALG00000024398 326.56 2628.65 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
72. RPS27A ENSGALG00000036790 319.20 2569.41 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
73. MDK ENSGALG00000008367 309.83 2493.98 midkine [Source:NCBI gene;Acc:423196]
74. ENSGALG00000028649 ENSGALG00000028649 307.15 2472.41
75. RPL24 ENSGALG00000015339 295.78 2380.89 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
76. ACTG1_1 ENSGALG00000001381 283.73 2283.89 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
77. ANP32B ENSGALG00000037483 281.06 2262.40 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
78. STMN1 ENSGALG00000001475 271.02 2181.58 stathmin 1 [Source:NCBI gene;Acc:396057]
79. EEF1D 270.35 2176.19 eukaryotic translation elongation factor 1 delta, transcript variant X13
80. HMGN2 HMGN2 260.31 2095.37
81. RPS3 ENSGALG00000017330 259.64 2089.98 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
82. CIRBP ENSGALG00000030918 257.63 2073.80 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
83. RPL3 ENSGALG00000012172 252.28 2030.73 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
84. CRHOA CRHOA 249.60 2009.16
85. HMGN5 ENSGALG00000007131 248.94 2003.85 high mobility group nucleosome binding domain 5, transcript variant X1
86. GNB2L1 ENSGALG00000000122 247.60 1993.06 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
87. RPL7 ENSGALG00000035252 246.93 1987.67 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
88. RPL10A ENSGALG00000002644 242.91 1955.31 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
89. RPL36 ENSGALG00000000474 240.91 1939.21 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
90. EEF1B2 ENSGALG00000008590 238.23 1917.64 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
91. ENSGALG00000002696 ENSGALG00000002696 234.88 1890.67
92. RPL22 ENSGALG00000000719 225.51 1815.25 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
93. ENSGALG00000028992 ENSGALG00000028992 222.84 1793.75
94. SNRPD1 ENSGALG00000041334 220.16 1772.18 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
95. RPL9 ENSGALG00000000150 215.48 1734.51 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
96. TXN ENSGALG00000015704 212.80 1712.94 thioredoxin [Source:NCBI gene;Acc:396437]
97. SET ENSGALG00000004701 208.78 1680.58 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
98. ENO1 ENSGALG00000002377 205.44 1653.69 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
99. ITGB1BP3 ENSGALG00000030120 205.44 1653.69 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
100. TPT1 ENSGALG00000028872 191.39 1540.60 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA