Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_1, section s18.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 8367.70 67363.08
2. MT-ATP6 MT-ATP6 3787.75 30492.79
3. MT-CYB MT-CYB 1916.18 15425.96
4. RPLP1 ENSGALG00000030878 1385.24 11151.69 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. MT-ND5 MT-ND5 1336.09 10756.02
6. MT-ND6 MT-ND6 1316.69 10599.84
7. MT-ND4 MT-ND4 1142.08 9194.17
8. RPS3A ENSGALG00000010077 1049.60 8449.67 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
9. MT-CO1 MT-CO1 1043.13 8397.58
10. EEF1A EEF1A 968.76 7798.88
11. gga-mir-3527 gga-mir-3527 951.30 7658.32
12. RPS10 ENSGALG00000002813 894.39 7200.17 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
13. RPL15 ENSGALG00000011290 789.63 6356.81 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
14. RPS29 ENSGALG00000012229 777.34 6257.87 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
15. RPS8 ENSGALG00000010124 666.11 5362.43 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. RPS12 ENSGALG00000013990 643.47 5180.17 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
17. ENSGALG00000018384 ENSGALG00000018384 636.36 5122.93
18. TMSB4X ENSGALG00000026383 620.19 4992.76 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
19. RPL35A ENSGALG00000007611, ENSGALG00000041230 613.72 4940.67 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
20. GAPDH ENSGALG00000014442 613.08 4935.52 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
21. RPLP0 ENSGALG00000023294 609.84 4909.44 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
22. gga-mir-3533 ENSGALG00000027736 580.09 4669.94 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
23. RPL38 ENSGALG00000001465 571.69 4602.32 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
24. MT-ND1 MT-ND1 532.24 4284.73
25. RPL23 ENSGALG00000001634 530.94 4274.26 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
26. RPL6 ENSGALG00000004818 525.12 4227.41 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
27. RPS21 ENSGALG00000005338 514.78 4144.17 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
28. RPL8 ENSGALG00000016232 506.37 4076.47 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
29. RPLP2 ENSGALG00000034811 491.50 3956.76 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
30. RPL19 ENSGALG00000001658 473.39 3810.96 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
31. ATP5G3 450.11 3623.55 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
32. RPL23A ENSGALG00000003966 449.46 3618.32 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
33. RPL4 ENSGALG00000007711 448.17 3607.93 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
34. RPL26 RPL26 440.41 3545.46
35. RPL14 ENSGALG00000043379 439.76 3540.23 ribosomal protein L14
36. RPL36AL ENSGALG00000004952 435.88 3509.00 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
37. RPS23 ENSGALG00000015617 433.29 3488.14 ribosomal protein S23
38. RPL18A 422.30 3399.67 ribosomal protein L18a
39. RPL27A ENSGALG00000005948 412.60 3321.58 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
40. RPL7A ENSGALG00000003197 410.66 3305.97 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
41. RPL27 ENSGALG00000002837 402.90 3243.49 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
42. NME2 ENSGALG00000002932 394.49 3175.79 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
43. PPIA ENSGALG00000028600 388.67 3128.94 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
44. RPS15A ENSGALG00000006771 386.08 3108.09 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
45. RPL21 ENSGALG00000027035 380.91 3066.47 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
46. RPS14 ENSGALG00000004588 369.27 2972.76 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
47. MT-ND3 MT-ND3 364.74 2936.29
48. RPL13 ENSGALG00000006179 360.21 2899.82 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
49. RPL29 ENSGALG00000026978 358.27 2884.21 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
50. RPL35 ENSGALG00000035677 358.27 2884.21 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
51. RPS13 ENSGALG00000006096 355.04 2858.20 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
52. MDK ENSGALG00000008367 353.10 2842.59 midkine [Source:NCBI gene;Acc:423196]
53. RPS4 RPS4 351.81 2832.20
54. RPL32 ENSGALG00000027142 345.34 2780.11 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
55. RPS7 ENSGALG00000016392 342.75 2759.26 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
56. RPS15 ENSGALG00000015195 338.23 2722.88 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
57. HMGN2 HMGN2 333.70 2686.41
58. RPSA 333.70 2686.41 ribosomal protein SA
59. HMGB2 ENSGALG00000010745 325.29 2618.70 high mobility group box 2 [Source:NCBI gene;Acc:396482]
60. SNRPD1 ENSGALG00000041334 322.06 2592.70 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
61. RPS11 ENSGALG00000017299 309.77 2493.76 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
62. RPL31 ENSGALG00000016775 305.24 2457.29 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
63. CIRBP ENSGALG00000030918 300.07 2415.67 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
64. ANP32B ENSGALG00000037483 296.84 2389.67 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
65. RAN ENSGALG00000002569 294.90 2374.05 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
66. RPS20 ENSGALG00000014432 294.90 2374.05 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
67. RPL37 ENSGALG00000014833 290.37 2337.59 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
68. RPS25 ENSGALG00000007699 289.72 2332.35 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
69. RPL12 ENSGALG00000008806 282.61 2275.12 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
70. TXN ENSGALG00000015704 276.79 2228.26 thioredoxin [Source:NCBI gene;Acc:396437]
71. RPS24 ENSGALG00000004871 276.14 2223.03 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
72. HSPA8 ENSGALG00000006512 272.91 2197.03 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
73. RPS6 ENSGALG00000015082 266.44 2144.94 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
74. HMGN5 ENSGALG00000007131 265.15 2134.56 high mobility group nucleosome binding domain 5, transcript variant X1
75. RPL24 ENSGALG00000015339 261.27 2103.32 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
76. RPS16 ENSGALG00000026490 259.98 2092.94 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
77. ENSGALG00000028649 ENSGALG00000028649 256.09 2061.62
78. TCEB3 ENSGALG00000034625 256.09 2061.62 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
79. RPS2 ENSGALG00000005490 253.51 2040.85 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
80. STMN1 ENSGALG00000001475 248.98 2004.38 stathmin 1 [Source:NCBI gene;Acc:396057]
81. SNRPG ENSGALG00000028409 235.40 1895.06 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
82. RPS27A ENSGALG00000036790 226.35 1822.20 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
83. RPL36 ENSGALG00000000474 220.53 1775.35 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
84. ACTG1_1 ENSGALG00000001381 216.65 1744.11 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
85. RPS28 ENSGALG00000024398 216.65 1744.11 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
86. H3-IX H3-IX 216.00 1738.88
87. MT-ND2 MT-ND2 214.06 1723.26
88. RPL7 ENSGALG00000035252 210.18 1692.03 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
89. GAL10 GAL10 207.59 1671.18
90. MIF ENSGALG00000006326 207.59 1671.18 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
91. ENO1 ENSGALG00000002377 198.54 1598.32 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
92. ENSGALG00000028992 ENSGALG00000028992 198.54 1598.32
93. ENSGALG00000002696 ENSGALG00000002696 196.60 1582.70
94. EIF3J ENSGALG00000008187 191.42 1541.00 eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
95. CRHOA CRHOA 190.78 1535.85
96. SHFM1 SHFM1 190.78 1535.85
97. PKM ENSGALG00000001992 190.13 1530.62 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
98. RPL22 ENSGALG00000000719 186.90 1504.61 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
99. ITGB1BP3 ENSGALG00000030120 186.25 1499.38 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
100. ENSGALG00000022570 ENSGALG00000022570 185.60 1494.15
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA