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Experiment Chicken_E3_posterior_slice_1, section s13.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 8393.81 67566.07
2. MT-ATP6 MT-ATP6 2416.24 19449.55
3. EEF1A EEF1A 1323.92 10656.91
4. MT-CYB MT-CYB 1311.03 10553.15
5. RPLP1 ENSGALG00000030878 1257.86 10125.16 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
6. TMSB4X ENSGALG00000026383 1209.93 9739.35 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
7. RPS10 ENSGALG00000002813 1078.23 8679.22 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. RPS3A ENSGALG00000010077 968.67 7797.32 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
9. RPS8 ENSGALG00000010124 836.16 6730.68 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
10. MT-ND5 MT-ND5 810.38 6523.16
11. MT-CO1 MT-CO1 795.48 6403.23
12. RPS29 ENSGALG00000012229 737.88 5939.57 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
13. RPL35A ENSGALG00000007611, ENSGALG00000041230 689.95 5553.76 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
14. MT-ND6 MT-ND6 683.10 5498.62
15. gga-mir-3527 gga-mir-3527 671.42 5404.60
16. RPS12 ENSGALG00000013990 666.59 5365.72 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
17. RPL14 ENSGALG00000043379 660.15 5313.89 ribosomal protein L14
18. RPL38 ENSGALG00000001465 655.31 5274.93 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
19. MT-ND4 MT-ND4 643.63 5180.91
20. RPL8 ENSGALG00000016232 640.01 5151.77 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
21. RPL36AL ENSGALG00000004952 635.58 5116.11 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
22. RPL27 ENSGALG00000002837 565.49 4551.92 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
23. RPS23 ENSGALG00000015617 561.06 4516.26 ribosomal protein S23
24. RPL6 ENSGALG00000004818 557.44 4487.12 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
25. RPL18A 551.80 4441.72 ribosomal protein L18a
26. RPL23A ENSGALG00000003966 546.16 4396.32 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
27. RPS21 ENSGALG00000005338 538.51 4334.74 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
28. gga-mir-3533 ENSGALG00000027736 536.50 4318.56 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
29. GAPDH ENSGALG00000014442 533.68 4295.86 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
30. RPL26 RPL26 515.95 4153.15
31. RAN ENSGALG00000002569 515.15 4146.71 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
32. RPL23 ENSGALG00000001634 506.29 4075.39 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
33. RPL27A ENSGALG00000005948 503.47 4052.69 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
34. RPS15A ENSGALG00000006771 484.54 3900.31 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
35. RPLP2 ENSGALG00000034811 472.86 3806.29 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
36. RPL29 ENSGALG00000026978 467.22 3760.89 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
37. RPL21 ENSGALG00000027035 466.82 3757.67 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
38. RPL13 ENSGALG00000006179 454.73 3660.35 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
39. RPLP0 ENSGALG00000023294 454.73 3660.35 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
40. RPL7A ENSGALG00000003197 451.11 3631.22 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
41. RPS14 ENSGALG00000004588 447.08 3598.78 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
42. RPL15 ENSGALG00000011290 444.26 3576.08 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
43. MT-ND3 MT-ND3 435.40 3504.76
44. RPL35 ENSGALG00000035677 425.73 3426.92 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
45. RPL19 ENSGALG00000001658 415.26 3342.64 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
46. RPS4 RPS4 413.65 3329.68
47. RPS7 ENSGALG00000016392 411.23 3310.20 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
48. RPL32 ENSGALG00000027142 406.40 3271.32 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
49. RPL4 ENSGALG00000007711 405.59 3264.80 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
50. RPS25 ENSGALG00000007699 401.97 3235.66 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
51. ATP5G3 399.95 3219.40 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
52. RPS13 ENSGALG00000006096 389.48 3135.12 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
53. RPS15 ENSGALG00000015195 366.93 2953.61 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
54. RPS16 ENSGALG00000026490 361.69 2911.43 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. CIRBP ENSGALG00000030918 359.27 2891.95 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
56. RPL37 ENSGALG00000014833 351.62 2830.37 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
57. RPS6 ENSGALG00000015082 350.41 2820.63 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
58. RPL31 ENSGALG00000016775 341.55 2749.31 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
59. RPS24 ENSGALG00000004871 339.94 2736.35 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
60. HMGB2 ENSGALG00000010745 337.93 2720.17 high mobility group box 2 [Source:NCBI gene;Acc:396482]
61. RPS11 ENSGALG00000017299 334.71 2694.25 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
62. TXN ENSGALG00000015704 330.27 2658.51 thioredoxin [Source:NCBI gene;Acc:396437]
63. MT-ND1 MT-ND1 328.26 2642.33
64. RPL24 ENSGALG00000015339 320.61 2580.75 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
65. MIF ENSGALG00000006326 315.37 2538.57 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
66. HSPA8 ENSGALG00000006512 312.55 2515.87 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
67. ENSGALG00000028649 ENSGALG00000028649 304.90 2454.30
68. ENSGALG00000018384 ENSGALG00000018384 304.09 2447.78
69. SNRPD1 ENSGALG00000041334 301.28 2425.16 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
70. RPS20 ENSGALG00000014432 296.84 2389.42 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
71. PPIA ENSGALG00000028600 291.21 2344.10 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
72. RPSA 285.57 2298.70 ribosomal protein SA
73. TCEB3 ENSGALG00000034625 279.12 2246.78 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
74. RPS2 ENSGALG00000005490 275.50 2217.64 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
75. RPL10A ENSGALG00000002644 272.68 2194.94 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
76. HMGN5 ENSGALG00000007131 270.26 2175.46 high mobility group nucleosome binding domain 5, transcript variant X1
77. EIF3J ENSGALG00000008187 266.23 2143.02 eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
78. RPL5 ENSGALG00000005922 264.22 2126.84 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
79. ANP32B ENSGALG00000037483 262.21 2110.66 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
80. NME2 ENSGALG00000002932 257.37 2071.70 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
81. MDK ENSGALG00000008367 256.16 2061.96 midkine [Source:NCBI gene;Acc:423196]
82. RPS3 ENSGALG00000017330 254.96 2052.30 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
83. HMGN2 HMGN2 245.29 1974.46
84. RPL7 ENSGALG00000035252 244.08 1964.72 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
85. ENSGALG00000002696 ENSGALG00000002696 240.86 1938.81
86. SHFM1 SHFM1 240.46 1935.59
87. RPL12 ENSGALG00000008806 239.25 1925.85 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
88. RPS27A ENSGALG00000036790 232.40 1870.71 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
89. ENSGALG00000028992 ENSGALG00000028992 223.54 1799.39
90. STMN1 ENSGALG00000001475 221.93 1786.43 stathmin 1 [Source:NCBI gene;Acc:396057]
91. EEF1D 217.90 1753.99 eukaryotic translation elongation factor 1 delta, transcript variant X13
92. ENO1 ENSGALG00000002377 217.50 1750.77 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
93. HSP90AB1 ENSGALG00000010175 216.69 1744.25 heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
94. H3-IX H3-IX 216.29 1741.03
95. RPL36 ENSGALG00000000474 214.68 1728.07 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
96. SET ENSGALG00000004701 210.65 1695.63 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
97. RPL22 ENSGALG00000000719 205.01 1650.23 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
98. H2AFZ ENSGALG00000014023 203.00 1634.05 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
99. PHB2 ENSGALG00000014567 201.79 1624.31 prohibitin 2 [Source:NCBI gene;Acc:771124]
100. UBB ENSGALG00000004509 199.37 1604.83 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA